Astyanax mexicanus (Mexican tetra): 103042433
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Entry
103042433 CDS
T05042
Symbol
taf4a
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103042433 (taf4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amex03021
]
103042433 (taf4a)
03036 Chromosome and associated proteins [BR:
amex03036
]
103042433 (taf4a)
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103042433 (taf4a)
Coactivators
SAGA/TFTC/STAGA complex
103042433 (taf4a)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
103042433 (taf4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
103042433
NCBI-ProteinID:
XP_022538488
LinkDB
All DBs
Position
24:complement(23529291..23551711)
Genome browser
AA seq
918 aa
AA seq
DB search
MVTTLPSHEVKPGTSTAQTFSGGDAMDARADSGAALPGTPVSNSSLPGSNSSPTAGTVLN
NGPGLLTSKGDGSSSSSSSNSGSGSVGGSSVPATSSTVIIQASASTGPTGATRPIGPTVT
VLRPAAMHTTPPTGTTIGAPALAVNGSNMNAVLNVAQQAPTAPPAPATAAGVTLTLTPQT
PGQALAPAPAPPGAPLGTTTIKPEPAKSIIHSAAGQSVVGHLHVSPGAAKGAVQLQQQQG
VVRSLVAQTPSPAGVRAIAPQQVLAPRIPQSSPGQPSIQNIQLPPGMVLVRSETGQLLMI
PQQVLAQMQAQMQATRTATPVSTTPGQITSAQTPGAPIMSRPFAPVIRQGSPTTSSPATT
TLQRPPAQLPSVGSVLTVQPGTAPRVATPATGTSITLPTETMENVKKCKNFLSTLIKLAT
SAKQSSQTAANVKELVKNLLEGRIEAEDFTSRLYKELNSSPQPYLVPFLKRSLPALRQLT
PDSLAFIQQSQGLPVRPAATVALASPTLVNPVTAASVATTVPVATAAAPAATGTATIAAG
TATATTSSVVSAATAATTAPRTLIQPAHNKTTQSASLVLQSQQQGTIVKTPQVALTTTPM
VALRGQPPSRIVVGQPHMQVKPLQTVSMKPGAVSGPRLASSPATLLAAQKSKLKDAAGGT
FRDDDDINDVASMAGVNLSEESARILATNSDVVGAVTRSCKDEAFLSTALLQRRILDIGK
RFGVTDLAPEVVNLVSHAAQQRLQNLLEKVSVIAQQKNMTYKEDGRYEQVTDVRAQLKFF
EQLDQMEKQKKEEQEREILMKAAKSRSRQEDPEQLRLKQKAKEMQQQELAQIRQREANLT
ALAAIGPRKKRKVDSPALGTDAEGSGSSANATAGLSGGVSRQFARQRITRVNLRDLLFCL
ENERESSRSQLLYRALLK
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggtcactactttgcctagccacgaagtgaagcccgggacgtcaacggcgcaaactttt
agcgggggcgatgccatggatgcgcgggcagacagcggcgccgctctccccggcacgccc
gtgtcgaacagcagcctgcccgggtcgaacagtagtccaacggcgggcacggtgctcaat
aacgggcctggactgttaacgagtaaaggtgatggaagtagtagtagtagtagtagtaat
agtggtagtggcagcgttggtggcagcagcgtgcctgccacctccagcacggttatcatc
caggcgagcgcgtccaccggacccacaggagccaccagacccatcggacccacagttacc
gtcttgagaccggctgctatgcatacaacaccaccaacggggacgacaatcggcgctccg
gcgctcgccgtaaacgggagcaacatgaacgcggtcctgaatgtagcccagcaggcgccg
acagcacctccagcacctgccaccgccgcaggagtcacgttgacattaactccccaaacc
ccgggccaggctctagctcctgctcccgctcctccaggagctcctctaggcacgacgacc
atcaagcccgagccggccaagagcatcatccacagcgcggcagggcagagcgtggtgggg
catctgcacgtgtctcccggggcggccaagggggcggtgcagctgcagcagcagcaaggc
gtcgtgcggagcctcgtagcccaaacccccagccccgcgggggtcagggctatagcgccg
caacaggtgctggcgccccggatcccccagagcagcccgggacagcccagcatccagaac
atccagctacctccaggtatggtgcttgtacgaagtgagactggccagttgctgatgatc
cctcagcaggtgttggctcaaatgcaggcccagatgcaggccacacgcaccgccacgccc
gtcagcactacacccggacagatcacgtctgcacagacccctggtgctccgatcatgagc
agaccgtttgctcctgtaatcagacagggctcacccacaaccagtagccctgctaccacc
acactccagagacctccagcacagctgccctctgtgggctcggtgctgacagtgcagccg
gggaccgccccgcgggtggcgactcctgccacagggaccagcatcaccttgccaacggag
acgatggagaatgtgaagaagtgtaagaactttctgtccacgctgatcaagctggccacc
agtgcgaaacagtcgtcacaaaccgccgctaatgtcaaagaactggtcaagaatttgctg
gaggggaggattgaagccgaggacttcaccagcaggttatacaaggagctcaactcctca
ccacagccttatcttgtgcctttcctgaagaggagtcttcctgctctgaggcagctcact
ccggactccctcgccttcatccagcagagccaaggcctgccggtcagacctgcagctact
gtagctctggccagtcccacgttagttaacccagtcactgctgcttctgtggccaccacg
gttccagtggccacagcagctgccccggccgccacaggcactgcaaccatcgcagctggc
acagccactgccactacttcatctgtcgtgtctgctgccaccgctgccaccacagcccca
cggacactcatccagcccgctcacaacaaaaccacccagtctgcctcactggtgttgcag
tctcagcagcaagggacaatagttaagaccccccaggtggccctgactactactcccatg
gtagcgctcaggggtcagccccctagccgcatcgtagtgggacagcctcatatgcaggtc
aaaccactacaaacagtgtcgatgaagcccggtgcagtgagtgggcctagacttgcttcc
agcccggcgacactccttgcagctcaaaagagcaagctaaaggatgcagctggtggaaca
ttcagggatgatgatgacatcaacgacgtggcctccatggctggggtgaacctgtcagag
gagagcgctcgcatcctggccactaactcggacgtggtgggggctgtgactcgctcctgc
aaggatgaagccttcctttccactgctttgttgcaacgcagaatactcgacataggtaaa
cgctttggggtgactgatctggcaccagaggtagtaaacctggtctcccacgccgctcag
caaagactacagaacttattagaaaaagtctctgttatagcacaacaaaagaatatgacc
tataaggaggatggacgttatgagcaggtaactgatgttcgagcacagctgaagttcttt
gagcagcttgatcagatggagaagcagaagaaggaggagcaggagagagaaatactaatg
aaggcagccaagtctcgctctcgacaagaggacccggagcagttgcggttaaaacaaaag
gccaaagagatgcagcagcaggagctagctcaaataagacagagggaggccaacttaaca
gcgctggctgctattggacccagaaagaagaggaaagtggactcgcctgctcttggcact
gatgcagagggttctggatcgtcggcaaacgcaacagcgggtttgagtggcggagtgtcg
agacagtttgctcggcagcgcatcacacgtgtaaacctcagggatctgctcttctgcctg
gagaacgagagagaaagcagccgctctcagctgctctacagagcactgctgaaatag
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