Astyanax mexicanus (Mexican tetra): 103042485
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Entry
103042485 CDS
T05042
Symbol
ofd1
Name
(RefSeq) oral-facial-digital syndrome 1 protein homolog isoform X1
KO
K16480
oral-facial-digital syndrome 1 protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103042485 (ofd1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amex03037
]
103042485 (ofd1)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
103042485 (ofd1)
Pericentriolar materials (PCM)
Centriolar satellite
103042485 (ofd1)
Centrosome duplication proteins
Centriole replication proteins
103042485 (ofd1)
Cilium and associated proteins [BR:
amex03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
103042485 (ofd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LisH_2
eIF3_subunit
FOP_dimer
Motif
Other DBs
NCBI-GeneID:
103042485
NCBI-ProteinID:
XP_049341222
Ensembl:
ENSAMXG00000001654
LinkDB
All DBs
Position
11:complement(1324353..1341181)
Genome browser
AA seq
1067 aa
AA seq
DB search
MSAVNEEGLSPEELRKRLYQTFKNKGLLDTLKTQLRNQLIQELQSPGEPVPRGLSAKGDS
VSVLASNSLVIDHLHRCGYEYTLSVFYPECGLSKDKVFSTRDLLQLLKISPQSPLYTSVV
SNVQSGQKGLLMNLLSELIAHRAHLQLRDADTQTSSTPPDSTQSLVEKLQVVDEEYEVLR
QKGNRWASVEAKLAEFRKEMEEQARAELKAKLQHFQEVEVSRVRMEEQERSRREVSEIRH
RLEKNYELKAEALMSREKNAIERLQKQQEIEEKEVYAQRQALLKEIETVRNREAELRLRT
EAFEKTCKLHEEKVKSTEELLRRRELSVKTQEDTYDQKLNNELKKVQLEFKEDYARRNEA
FIENERRNKEETARLHKEATILDTKMEEHERALRELKRVQVEMESLRAQGGALTRQNALL
RERLDGMSDYTAIRSERLELQAEVHLLKEQLEKKQQENQKLRQELSTPSHEQLVLQAEVR
RLETARRLDQEEFQTQREVFQSQLTQEVERCAQLKAQFLECEERTKWMSANAEEIKQQLR
LTQLALENEVLRNPKPSLVDRSVLDLNPDKVVPPDVYVDGALLKATVGYDDEDEDVCDPG
PTIRGRRRVPRPRSGSLEPETEAVAEALARMRELEKEAETLEEAYRSYQQRAVRAPLERN
ATAYIRPTAAAQHRVTFDLNAPNLGPVFTARDLHHRDFPEPTSPSERAPPRARSPPPRRL
SSTPVSASKTRGQRTHTDQEVHVESSRVGGSAVTFTGLSSERDVSPIPAAEYSHITPPSS
PQMKSTARDHCSPPKLQEIISSSSQESSPKPEKISIQDLTQPVSVLSADLHCSLAQLQDG
RVTSPNLQPSERERVSPLPSPWRENTSGVTPSNLASDGDKVKEEEQERKRREQEEEEERK
RRQKDKEEEEQERRQRERKEEEEQEKRKREREEEERDEEEEQERRQKERDEEEERDMREL
EQELVNQAVSEGGVRGEGSERGGVRGEGSERGGVMEQNIPALQNQSSTDSLQRYMMMVME
GQEKEQREQISLKDDSVNLSQEAAALSESKDDSIAAFSHDEPDDDFW
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagtgaatgaagagggtctttctccagaggagctcaggaagaggctttaccag
accttcaaaaacaaaggacttctggacactttaaagactcagcttcggaaccagctgatc
caggagctgcagagtccgggtgaaccggttcctcgggggctctcagctaaaggggattca
gtctcagttctggcatccaacagtctggtcatcgatcacctgcacaggtgtggatatgaa
tacacgctgtctgtgttctacccagagtgcggactgagcaaagacaaggtgttttcaaca
agagatcttcttcagcttttaaagatcagtccacaatcacctctctacacgtctgtggtg
tcaaatgtccagagtggacagaaaggtctgttgatgaatcttctctctgagttgattgca
caccgcgctcacctgcagctcagagatgctgatactcagacctcctcaacaccacccgac
tccacacagtcactcgtggagaagctgcaggtggtcgatgaggagtatgaagttctgagg
cagaaggggaaccgctgggcatcggtggaagcgaagctcgctgagttcaggaaggagatg
gaggagcaggcgcgggcggagcttaaagcaaagttgcagcacttccaggaggtggaggtg
tcccgggtgcggatggaggaacaggagaggagtcggagagaagtctctgagatcagacat
cgcctggagaagaactacgagctgaaggctgaagcgctgatgagccgagagaagaatgct
atagagcgtctgcagaaacagcaggagatagaggagaaggaggtgtatgctcagcgtcag
gctctgctgaaggaaatcgagaccgtccgcaacagagaggctgaactgaggctcagaaca
gaggcctttgagaagacctgtaaacttcatgaggagaaagtgaagagcacggaggagctc
ctgaggcggagggagctctctgtaaagacccaggaggacacatatgaccaaaagctcaat
aacgagctcaagaaagtccagttggagtttaaggaggactacgccaggaggaacgaagca
tttatcgaaaatgaaaggagaaataaagaggagaccgcgaggctccataaagaagccacc
atccttgacacaaagatggaggaacacgaacgagcgttgcgtgaactgaagcgtgtgcag
gtggagatggagtcgttgcgagcacaagggggcgcactaacccgtcagaatgctcttctg
cgagagcgtctggatgggatgagtgattacacggctatacggagcgagcgcctggagctg
caggctgaggttcatctgctgaaggaacaactggagaagaaacagcaggagaaccagaaa
ctccgccaagagctgagtacaccctctcacgagcagctggtcctgcaggctgaggtccgg
aggctggagacggctcgcagactggaccaggaggagttccaaacccagagggaggtgttc
caatcccagctcacgcaggaggtggagcgctgtgcccagctaaaggctcagtttctggag
tgtgaggagaggactaagtggatgtcggcaaacgcagaagagatcaagcagcagctccga
ctcactcagctggctctggagaacgaggtgctgaggaacccgaagccctcgctggtcgac
cgctctgttctcgatctgaaccctgataaagtggtgcctcctgacgtgtatgtggacggc
gctctgctgaaggccactgtgggttatgatgatgaggatgaggatgtgtgtgacccaggg
ccgaccatcaggggacgcaggcgagtaccgaggccccgcagcggctccctggagccagaa
acggaggcggtggccgaagccctggcacgaatgcgagagctggagaaggaggcggagacg
ctggaggaggcgtaccggagctaccagcagagggcagtgcgggcaccgctcgaacgaaac
gccaccgcgtacatccggcccaccgccgcggctcagcacagagtgaccttcgacctgaac
gcaccaaatctgggcccggtgttcacggcaagagatctgcaccatagagacttccctgaa
ccgacatcacccagtgagagagcgccccctagagcacgctctcctccaccgagacgcctg
tcctccactccagtctccgcctccaaaacacgaggacagaggacacacactgaccaggaa
gtgcatgtggaatcctccagagtgggcgggtcagcagtaacatttacaggtttgagctca
gagcgggacgtctctccgattcctgctgctgaatactctcacatcaccccacccagcagc
ccccagatgaagagcacagcgcgggaccactgcagtcctccaaaactgcaggagatcatc
tccagttcatcccaggagtcttcacccaaacctgagaaaatcagcattcaggacctgact
cagcccgtatcagttctctctgcagatcttcactgcagtttagcacagcttcaggatgga
cgtgtgacgtctcctaacctgcagcccagcgagagagagagggtcagccccctgcccagc
ccctggagagagaacaccagcggtgtgactccatcaaacttggccagtgatggagataaa
gtaaaggaggaggaacaagagaggaaacgaagggagcaagaagaggaagaggagcgaaaa
agaagacagaaggacaaagaggaggaggaacaagaaaggagacaaagggagagaaaagag
gaagaggagcaagagaagagaaaaagggagagagaggaagaggagcgagatgaggaagag
gagcaagagaggagacaaaaggagcgagatgaggaagaggagcgagacatgagagaactg
gagcaggagttggtaaatcaggctgtgagtgagggaggagtgagaggagaggggagtgag
agaggaggagtgagaggagaggggagtgagagaggaggagtgatggagcagaatattcca
gctttgcagaaccagagttctacagattctctccagagatacatgatgatggtgatggag
ggccaagagaaggagcagagagaacagatttctttaaaagatgattcagtaaatctgagc
caggaggcggcagctctgtctgagagcaaagacgacagcatcgctgcattctcccatgat
gagcctgatgatgatttttggtga
DBGET
integrated database retrieval system
