Astyanax mexicanus (Mexican tetra): 103042510
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Entry
103042510 CDS
T05042
Symbol
usp38
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amex01002
]
103042510 (usp38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103042510 (usp38)
Enzymes [BR:
amex01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103042510 (usp38)
Peptidases and inhibitors [BR:
amex01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103042510 (usp38)
Ubiquitin system [BR:
amex04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103042510 (usp38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
HPF1
Motif
Other DBs
NCBI-GeneID:
103042510
NCBI-ProteinID:
XP_022540128
Ensembl:
ENSAMXG00000005773
LinkDB
All DBs
Position
25:complement(3622646..3638985)
Genome browser
AA seq
963 aa
AA seq
DB search
MDKILEALVSSSHPLPIKRAIVKKVVEAAEKEVTQEQCQALYQLSTRLILQGEDAFQRQV
GQQVQEAYARFHRDEFARFLSKEFVLGLLQQGYGTLDRRDPAILDFLHGSLRLLLSCPAV
LELAPLLQTEVLRMVCERPEATLCAKLATLLNDFSQCMPRDKTAVLFCQQLVRTFAHFQC
PAGQEAELRLYVTQVNSVATLLQGIWKAEPATLLPSLQEVFAIISSTDPSFDPSIALASL
VQHIPLQMITVLIKSLTTDQNVKDASMTQALSRMIDWLSWPLANHVDTWVIALLKGLAAV
QKFTILIDVTLLKIELVFNRLWYPIVRQGALAVLSHMLLSFQHSPEAFHLVVPHVVSLVQ
SLQNDGLPTSKAFVLQFTELIHCMMYQYSGFPDLYDSILEAIKVRYPIYSNPSELFIILI
VLISLFFHQRAAYAPRNFLEASRPPWFTVGSQQDCSEYLRFLLDRLHEEEKTLRALQTTK
PKTDSSDADIIDEGAAHSVPNSLPSSHPEPEDAKGEGQTLVERMFGGRLSTGIRCLQCHS
LSEKEEPFTDLSLAFCPPALQSTVGPCQGSVNGGSENSEGPVKEPQSVGRPTSEPALSLT
DLVEYFLAPEILEEENCYFCERCGSLQRAERAMRVVAAPEYLILTLLRFSYDATCHVRRK
ILDNVRIPRRMCLPVHQHHASASNTGAATVALSSSSSSSSPLAPMDSPESGENLAKKLKP
SRREEEEEEEQEKGLTDSGREGGLRGERSDMHSVPYVLSSVVMHSGMSSESGHYYSYGRN
VSGTDRCAVASTLANPCCRTSETDAGLSNSSQSESCAAPREVLESAGQNSRDWFLFNDSR
VTFTNFQSVQNITSRFPKDTAYVLIYRKQDVIGQSGGAQGSMNGSRLNAEPPLHKDLMDA
ITKDNKLFLQEQELNARTRALQAASASCSFRPNGSDDNEPPGSCGPSGGGGGGGFNTVSR
LVF
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggataagatcttggaagctttggtgagttcctctcaccctttacccatcaagcgagcc
atagtgaagaaagtggtggaggcggcggagaaggaggtgacgcaggagcagtgccaggcc
ttataccagctgtcgacgcgcctgattctgcagggcgaggatgccttccagcgtcaggtg
ggccagcaggtgcaggaggcgtatgcccgcttccaccgggatgagtttgcccgttttctc
agtaaggagtttgtgctggggctgctgcagcaaggctacggcacactggacagaagggat
cccgctatcctggactttctgcacggctccctgaggctcctcctcagctgccctgccgtg
ctcgagttggcgccgctgctgcagacggaggtgctgaggatggtgtgtgagcgccctgag
gctacgctctgtgctaaactggccactttactgaacgacttctcgcagtgcatgccacgg
gataaaacggctgtgctgttctgccagcagctggtgcgaaccttcgcccacttccagtgc
cctgccgggcaggaggcagagctcagactatatgtaacgcaggtgaacagcgtagccacg
ctgctacaggggatctggaaggcagagccggccacactgttgccctcactgcaggaggtg
ttcgccatcatctcctctacagacccttcgtttgatccctctatcgctttggccagcctg
gtgcagcacatccctctgcagatgatcacagttctcatcaagagtctcactactgaccag
aacgtcaaagacgccagtatgacacaagcactgagcaggatgatcgactggctgtcgtgg
ccccttgccaatcatgtagacacctgggttattgctctactaaagggtctggctgctgtg
cagaaatttaccatcctcatagacgtcacattgctcaaaattgaactggtatttaatcgt
ctgtggtaccccattgtgagacagggagcgttagcagttctctctcacatgctgctcagc
ttccagcactctccggaggctttccacctggtggtcccccatgtggtgtctctagtgcag
tctctgcagaacgatggcctccccaccagcaaagccttcgtgctgcagttcactgaactg
atacactgtatgatgtaccagtactctggcttccctgacctctacgacagcatcctcgaa
gccattaaggtgagatatccaatttacagtaatcccagtgaactgttcattattcttatt
gtactcattagtctgtttttccaccagagagcagcatatgcaccaagaaatttcctagaa
gcatctcgaccaccctggttcacagtaggatcacagcaggactgctcggagtatctgcgc
tttcttttggacagactacatgaggaagaaaagactctcagagctctgcagacaaccaaa
cctaagaccgactcctctgacgctgacattattgatgagggtgcagcacacagcgtgccc
aacagcctgccaagttctcatccagaacctgaagatgctaaaggtgagggacagactcta
gttgagcgaatgttcggcgggcgtctctctacgggcatccgctgtctgcagtgccacagc
ctctctgagaaagaggaacccttcacggatctttccctggccttctgccctccagccctt
cagtccactgtaggaccctgccaaggatcagtcaatgggggcagtgagaattcggaaggc
cctgttaaagaaccccaaagcgtggggaggcccacatcagagccagctctgtccttaact
gacctggtggagtattttctggccccggagattctggaggaggagaactgctacttctgc
gagcgctgtgggtcgctgcagcgagccgagagggccatgagggtggtggccgctccggaa
tacctcatcctcacactgctgcgcttctcgtacgatgccacgtgccatgtacgccgcaag
atcttggacaatgtacgcatcccgcggcgcatgtgcctgcctgttcaccaacaccacgca
tctgcctctaatactggtgctgctactgttgctttatcttcgtcttcctcatcctcatca
ccattggcaccaatggactcccctgagagtggcgaaaacctggccaagaagctaaagccc
tcaaggagagaggaagaagaagaggaggagcaggagaaagggttaacggacagtggtaga
gagggaggattaaggggggaaaggtcagatatgcattcagtcccatatgtcctcagttca
gttgtaatgcattccggcatgtcctcagaaagcggtcactactactcgtatggcaggaac
gtaagcggaacagacaggtgtgctgttgcctcaacattagccaatccctgctgcagaact
tctgaaacagatgcagggcttagcaacagcagccaatcagagagctgcgcagctccacgt
gaggtattagagagcgcaggacaaaactccagggattggttcctgtttaatgacagccga
gtgactttcaccaacttccagtccgtgcagaacatcacaagccgcttcccaaaggacaca
gcctacgtcctgatctacaggaaacaagacgtcatcggacagtccggtggtgcacaaggt
agcatgaatggttctaggttaaatgcagagccgccgcttcataaagacctgatggatgcc
atcaccaaagacaataagctcttcttacaagagcaggagctgaatgccagaacccgtgct
ctccaggcagcctcagcctcctgctcgtttcggcccaacggctcggacgacaacgagcct
ccgggcagctgcgggccttcgggtgggggagggggcggaggcttcaacactgtcagcaga
ctggtcttctga
DBGET
integrated database retrieval system
