Astyanax mexicanus (Mexican tetra): 103042516
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Entry
103042516 CDS
T05042
Symbol
dennd4c
Name
(RefSeq) DENN domain-containing protein 4C isoform X2
KO
K20163
DENN domain-containing protein 4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103042516 (dennd4c)
Membrane trafficking [BR:
amex04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
103042516 (dennd4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
DUF2464
PPR_2
PPR
PPR_3
Motif
Other DBs
NCBI-GeneID:
103042516
NCBI-ProteinID:
XP_007255256
Ensembl:
ENSAMXG00000002524
UniProt:
A0A8B9L1W8
LinkDB
All DBs
Position
8:complement(28127904..28189184)
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AA seq
1945 aa
AA seq
DB search
MIEDKGHRVTDYFVVAGLTDKSTPLEQDLSETKSSGPKAPITDLAVINKSAGETVPEGFT
CIEVTTTGQPANLNHGSLKSPELFLCYKRGYGKPPLSDIGVLYEGKDRLMQGCEVIQATP
YGRCANVNNSSATSQRIFVTFRRSPPVQPQNSLAVTDICVIITSKGETPPHTFLKVEKNL
NCGMWGSSVFLCYKKSVSASNSIAYKAGLIFRYPEEDYESFPLSDSVPLFCLPMGAKIES
WAPNTRYPLPVFSTFVLTSSSGEKVYGAAIQFYELYPTENLSEKQKIQLGLLTAVDKKPI
PGRTVNTNKCICLLSRWPFFKAFKEFLMFLYRLSADSVNPLPIEKHISHFMHNVPFPSPQ
RPRIMVQTWAHENIMLSQPVCTPLPLSGADYSTLLKNLGPENCATLLHFILLENKILLHS
LRPDVLTGIAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVDSRYFDLHEPPP
DVVCVDLDTNTIYLSDEKKYSNWKNLPKKPCKSLINSLVNLHHQLTIVRRNASENSAVEM
TPIEADFTWVNKMAGLEMEVQEAFLRFMASILKGYRSYLKPITQAPSEKATAADSLYDLQ
GFLKSRDRAHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDYCIEKLFPSDKGTDKG
TKVEGEWSEDAKLLELDESQKSEHTVFIMPPEPPPDDGSQPPATYSYKSFPRLRLELFDR
PQELKPALSNRAAGASLSSSPALLAKRTKQEVKLAYKMAKRCYSNPPQWAKCLYSHCYSL
WFICLPAGLRISHSKPRAMQQALNVLVKMRSTEVEVLDEVCYRVVMQLCGLWGMPVLAVR
VLMEMKKAGVEGNAITYGYYNKAVLESPWPSRNRSGRFMWTKVRNVVRGVAQFKQGLQSS
ARSKRAPPITTVVSLDAIADGEGDRLSHCSADSASLANGEEHALFPRRLIVEDTNGSHCS
TGGQSDQGYGSKDELHQDTVDASKSTVFPLSTGDHVSKSKTVMSQENGKDIAGSVDSAVA
VSEPPSPAEPTSPSPSIVKLSTGSFDLSTGRRDSGGGSTGGGKLFTPRSMSEDISLPEDD
GPANADTTQPSQQQRVKAFAERSCSFSAESRAGMLLKKNSLELSVDHMGADAKILAAAFS
GGKTPPPTTVSGSVFKELEMGPSAPSALKEEDNEEGGEKKELIDLSDEPTDKGKKPTEVI
TPSDEGAGKGLSVSSSSKGVEREDVEIGADPLSLLASENEEAASIQSQESARLVPTVVSR
KLADEIEMYMNLKSPLGAKASSMELHQGPQRDADLRKSDLVDSPAGKQSLERRSSLPAGP
VKAPDSLETPKRSPAVTRSKTFAIKSPKTPGSAGQRSSSLTALVRSSQSGSLGSVITSIS
GIKMDTLLSGPKVDMLKHGMKQAATVAGKVWNAVASAYNYSDDEDDQNQPRDSFPAHLEE
QLLGDDEADRPMPRGLMTSLAANGLTHSNTSLGSSGSSDNGRGLHGQHLTSGRFMRGADS
ERSEQSSSHHASSSSIYCALEVLMSSCSQCRSCEALVYDEEIMAGWTADDSNLNTTCPFC
QTSFLPLLHVEFNDLRTTPGFYLKISTSGDSLHSSSTQPTASTSSEVKVGSPSDPPDLIS
FSDSPDSKGQHEETLTNQGGAQKALVPEPVISDPLGLLERQAEKRGTSLTRSNSVGGPLQ
SLDSTQRPNHGISTTSLPNSLQEVVDTLGQKRPNPKPVSVPYLSPLVLRKELETLLENEG
DQVIYTQKFLSQHPIIFWNLVWYFRRLDLPSILPGLILTSEHCNNGVQLPQTSLPQDSKL
VYVQLLWDNVNLHQEPTEPLYQRWRTFLQMKGSLAPTDHQEIRTLLNSIVRSIQTNDVYG
PINLLLREIKRHPELKRQRSIYREILFLSLVALGRENIDVEAFDREYRVAFDELSPEQLK
ALSSIDRPPSNNVQWCVKCFGAPFI
NT seq
5838 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagacaagggtcatcgcgtgacggactacttcgtggtggccggactgacagac
aagtccacaccgctagagcaggatctttctgagacaaagtctagtggtcccaaagcccca
atcactgatctggcagtaatcaacaagtctgcgggtgagactgtgcctgaaggctttaca
tgcattgaggtcaccaccacaggccagccagccaacctcaaccatggaagccttaagagt
ccagaacttttcctgtgttacaagaggggctatgggaagcctcctttaagcgacattggg
gtgctgtatgaaggtaaggaccgtctgatgcagggttgtgaagtgatccaggctacacca
tatgggcgctgcgctaacgttaacaacagttcggccacatctcagcgcatcttcgtcacc
ttccgtcgctcgccgcctgtccagccacagaactcccttgcagtcacggacatatgcgtc
ataatcacaagcaaaggagagactcctccacacacttttcttaaggttgagaagaacctg
aactgtggcatgtgggggtccagtgtgttcttgtgttacaagaagtctgtgtctgcctcc
aactctatcgcctataaagcaggtttgatcttccgctacccagaggaagattatgagtcc
tttcctctctcagactcggtgcctctcttctgccttcctatgggagccaagattgagtcc
tgggcaccaaatacacgttaccccttacccgtcttctccactttcgtcctaaccagctcc
tctggggaaaaggtctacggtgcagccatccagttctatgagctctacccaacagaaaat
ctgagtgagaagcagaagatccagctgggactcctcaccgctgtagacaagaaacccatt
cctggccgtacagtcaacaccaataagtgcatctgtctgctttcacggtggcccttcttc
aaggcctttaaagaattcctcatgttcctctacaggctctcagctgatagtgtcaaccct
ctgcccattgagaaacacatctcccactttatgcataatgtgcccttcccctcaccacag
aggcctcgaataatggtccagacttgggcacatgaaaacattatgttgtcccagcctgta
tgcacacctttaccactaagcggggcagactacagcactctgctgaagaacctgggccca
gagaactgtgctacactgttgcatttcatcctgctggagaataagattctgcttcactct
ttaagaccagatgttctgaccgggatagctgaagctgtggtagcgatgatctttcctttc
cagtggcagtgcccctacatccctttgtgtcctctctccctggctggggttctgaatgcc
ccctgtccttttattgtgggcgtggactccagatactttgacctccatgaacctccacca
gatgtggtttgtgtggatctggacaccaacactatctacctgtctgatgaaaagaagtat
agcaactggaagaatctccccaagaagccttgcaagagtcttattaactcactggtcaac
ctccaccaccagctcaccattgtgaggcggaatgcttcagaaaactctgcagtagagatg
actccaattgaggcggacttcacttgggtaaataagatggccgggctggagatggaggtc
caagaggcctttctccgcttcatggcctccatactaaagggctaccgcagctacctcaag
cccatcacccaggcgccctcggagaaggccacagccgcagactctctctacgatttgcag
gggttcttgaagagtagagatcgtgcacaccagaaattctactcccagctcaccaagacc
cagatatttattcgctttatcgaagaatgcaccttcgtcagtgacaaagacacaggactg
gccttttttgactattgcattgaaaagcttttcccgtctgataaaggaacagacaagggc
acaaaggttgaaggagagtggtcagaggatgcaaagctgctggagctggatgagtctcaa
aagagtgagcacactgtcttcatcatgcctccagaaccacctcctgatgacggctcacag
cctcctgctacatacagctacaagagcttcccccggttgcggttggagttgtttgatcgg
ccacaggagctgaagccagcactcagcaacagagcagcaggggccagtctgtccagcagc
cctgcactcctggcaaaaagaaccaagcaggaagtgaagctggcctacaagatggcaaag
cgctgctactcaaaccctccccagtgggctaagtgtctgtacagccactgctacagcctg
tggttcatttgtctgcctgcaggcctgcgtatatcccattctaaacctagggccatgcag
caggccctcaatgtcctagtaaagatgaggagcactgaggtggaggtgctggatgaggtg
tgttatcgtgtggtgatgcagttgtgtgggctgtgggggatgcctgtcttggctgtgcgt
gtcttaatggagatgaagaaggctggagtcgagggcaatgccattacttacggatactac
aacaaggctgtcctggagagcccttggcctagcagaaaccgcagtggccgcttcatgtgg
accaaagtgcggaacgtggtgcgaggtgtggcccagttcaaacagggtctgcaaagctca
gctcgctctaaaagagctcctccaattaccacagtagtgtctctggacgcaatagcagat
ggtgaaggagaccgactcagccactgtagtgccgatagcgccagtttggctaatggagaa
gaacatgcactattcccacgtcgacttatcgttgaagacaccaatgggagtcactgtagc
acaggagggcagtctgaccagggatatggctccaaggatgagctacatcaggacactgta
gatgcttccaaatctacagtttttccactttccactggggaccatgtcagcaagagcaaa
acagtcatgagtcaagaaaatggtaaggacattgctggttctgttgacagtgcagtggct
gtttctgaaccacccagtcctgctgagcccacatctccttcacccagcatagtcaaactc
tctactgggagctttgacctctctacagggagaagagactcaggtggtggttcaacaggt
ggtggaaaactcttcacccctcgcagtatgagtgaggacatctccctgcccgaagatgac
ggccctgcaaatgcagacacaacccagcctagtcaacagcagcgagtcaaagcttttgct
gagcgcagctgtagcttcagtgcagagagcagagctggaatgctcctgaagaagaacagt
ctggagctgagtgtggaccacatgggcgccgatgctaaaatattagccgctgctttttcc
ggaggcaaaactcctccacccactacagtctcaggctcagtctttaaagagctggagatg
gggccaagtgcaccgtcagctctcaaggaggaagataatgaagaaggcggtgagaaaaag
gaactaattgatttaagtgatgaacctacggacaaagggaagaagccgacagaggtgatc
acaccttcagatgaaggagcagggaaaggtttaagtgtatcctcctcttctaaaggggtg
gagagagaggatgtagaaataggggcagaccccttgtccctactggcctcagaaaatgag
gaggcagcctccatccagagccaagagtctgctcgcctcgtcccgacagtggtctcacga
aagctcgccgacgagattgagatgtacatgaacctcaagagcccattaggggccaaggcc
tccagcatggagcttcatcaggggccacagcgtgacgcagacctgcggaagtctgacctt
gtggactctccagctggcaagcagtctctggagcgacgatccagcctccctgctggacca
gtgaaagcccccgattcactggaaacccccaaacgcagccctgcggtcacaagatccaag
acctttgccatcaagtccccaaagacacctggctctgcaggtcaaaggtcatcctcgttg
actgcactagtcaggtcttctcagagtgggtcattggggtctgttatcacctccatctct
ggcatcaagatggacaccttgctttcaggacctaaagtggacatgctaaagcatggcatg
aagcaggcagccaccgtggctggaaaagtctggaatgccgtggcctcagcctacaactac
tctgatgatgaggatgaccagaaccagcctagggacagctttcctgctcatctggaggag
cagctgctcggtgatgatgaagcggataggcccatgcctagaggcctgatgaccagcctt
gccgccaacggcctcactcacagtaacaccagcctgggtagcagtggcagcagtgataat
ggccggggactacatgggcaacatttgacttccggcaggttcatgagaggtgctgactct
gaaaggtctgagcagagctcatctcatcatgcaagcagttcaagcatttactgtgcttta
gaggtgttaatgtccagctgttctcagtgtcgctcctgtgaggctctggtgtatgatgag
gagatcatggcaggctggacagcagatgattccaacctgaacaccacttgtccgttctgc
cagacctccttcttgcccctgcttcatgtggaatttaatgatctgcgcactacacctggg
ttttacctgaagattagcacttcaggagacagtctccacagtagtagcacccagcctaca
gcctccacatcatcagaggtcaaggtgggcagtcccagtgatccacctgatctcatcagc
ttctctgattcccctgacagcaaagggcagcatgaggagacactgaccaatcagggtgga
gcacagaaagctctcgtgcctgagccagtgatttcagaccccctgggactcttggagaga
caggcagagaagcgtggcacatctctgacccgcagcaacagtgtgggtgggcctctacag
agcttggattcaacccagcggcccaatcatggaatctccaccaccagcctgcctaatagc
ctgcaggaggtagtggacacactgggtcagaagcgacccaatccaaaaccagtctctgtg
ccttacctcagccctctagtgttacgaaaggagctagagaccttactggagaatgaggga
gatcaggtaatctacactcaaaagttcctcagccagcaccctatcatattctggaaccta
gtgtggtatttccgccgattggaccttcccagtattctacctggactcatactgacctct
gaacactgcaacaatggtgtacagcttccgcagacatccttgcctcaagacagtaagctg
gtttatgtgcagctgctgtgggacaatgtcaacctgcaccaggagcccacagagccgctc
taccagcgctggaggaccttcttacaaatgaaggggtctttggctcccactgaccaccag
gaaatacggacactactgaacagcattgttaggagcatccagacgaatgatgtctatggt
cctatcaacttgctacttagggaaatcaagaggcacccagagctcaagcggcaacggagt
atttacagggagatcttattcctttcacttgtggccttggggagagagaacattgatgtc
gaggcctttgatcgggagtatcgagtagcctttgacgagctgagccctgagcaactcaaa
gctctctcatccatcgacaggccaccttccaacaacgtgcagtggtgcgtcaagtgcttt
ggagctccatttatctga
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integrated database retrieval system
