Astyanax mexicanus (Mexican tetra): 103042533
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Entry
103042533 CDS
T05042
Symbol
si:dkey-13a21.4
Name
(RefSeq) ras-related protein Rab-7a
KO
K07897
Ras-related protein Rab-7A
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04137
Mitophagy - animal
amex04140
Autophagy - animal
amex04144
Endocytosis
amex04145
Phagosome
amex04148
Efferocytosis
amex05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103042533 (si:dkey-13a21.4)
04145 Phagosome
103042533 (si:dkey-13a21.4)
04140 Autophagy - animal
103042533 (si:dkey-13a21.4)
04137 Mitophagy - animal
103042533 (si:dkey-13a21.4)
04148 Efferocytosis
103042533 (si:dkey-13a21.4)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103042533 (si:dkey-13a21.4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103042533 (si:dkey-13a21.4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amex04147
]
103042533 (si:dkey-13a21.4)
04031 GTP-binding proteins [BR:
amex04031
]
103042533 (si:dkey-13a21.4)
Membrane trafficking [BR:
amex04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
103042533 (si:dkey-13a21.4)
Exosome [BR:
amex04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103042533 (si:dkey-13a21.4)
Exosomal proteins of other body fluids (saliva and urine)
103042533 (si:dkey-13a21.4)
Exosomal proteins of colorectal cancer cells
103042533 (si:dkey-13a21.4)
Exosomal proteins of bladder cancer cells
103042533 (si:dkey-13a21.4)
GTP-binding proteins [BR:
amex04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
103042533 (si:dkey-13a21.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
RsgA_GTPase
MMR_HSR1
GTP_EFTU
ATP_bind_1
Gtr1_RagA
cobW
AAA_22
AAA_16
AAA_24
AAA_5
PduV-EutP
Septin
AAA_7
MobB
NACHT
ABC_tran
Motif
Other DBs
NCBI-GeneID:
103042533
NCBI-ProteinID:
XP_007237580
Ensembl:
ENSAMXG00000032663
UniProt:
A0A8B9H7E4
A0A3B1IQ02
LinkDB
All DBs
Position
24:complement(297378..300968)
Genome browser
AA seq
217 aa
AA seq
DB search
MRGLSDMMGDWTKPHLKLVLVGNSGVGKTSLMTRFVDHRFTNMYRATIGVDFLTKELTVD
KNTVILQLWDTAGSERFFSLGSALYRGAHCCLLVFDLGSDSSFRALDGWISEVLLQTDPA
DPAERGTFPFIVVGNKTDLQTRQVCSERVQQWCEGLGAEYFECSAKENTAVDSAFITAAR
AALRTFKHSAVDQTNNIQITDKDQEQHPNYRESKCSC
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgaggggattatctgatatgatgggcgattggactaaaccccatctgaagttggttctg
gtgggaaactctggggtggggaaaacctcactgatgacgcggtttgtggaccatcgattc
actaatatgtaccgagccacgattggagtggatttcctgactaaagagctgactgtggat
aaaaacaccgtgattctgcagttgtgggacacggctggttctgagcggttcttctctctg
ggttctgctctgtaccgcggggctcactgctgcctcctggtgtttgatctgggttcagat
tcctctttcagggctctggacggctggatctctgaggtcctgctgcagactgacccggct
gacccggccgagcgcgggaccttcccctttatagtggtggggaacaagacggacctccag
acccggcaggtgtgttctgagcgtgtgcagcagtggtgtgagggtttgggggctgagtat
tttgagtgcagcgctaaagagaatacagctgtagattcagcttttataactgcagcccga
gcggctctccgtacctttaaacacagcgctgtggatcaaacaaacaacatccaaatcacc
gacaaagaccaagaacagcatccgaattacagagaatcaaaatgctcgtgctga
DBGET
integrated database retrieval system