KEGG   Astyanax mexicanus (Mexican tetra): 103042533
Entry
103042533         CDS       T05042                                 
Symbol
si:dkey-13a21.4
Name
(RefSeq) ras-related protein Rab-7a
  KO
K07897  Ras-related protein Rab-7A
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04137  Mitophagy - animal
amex04140  Autophagy - animal
amex04144  Endocytosis
amex04145  Phagosome
amex04148  Efferocytosis
amex05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:amex00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103042533 (si:dkey-13a21.4)
   04145 Phagosome
    103042533 (si:dkey-13a21.4)
   04140 Autophagy - animal
    103042533 (si:dkey-13a21.4)
   04137 Mitophagy - animal
    103042533 (si:dkey-13a21.4)
   04148 Efferocytosis
    103042533 (si:dkey-13a21.4)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    103042533 (si:dkey-13a21.4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:amex04131]
    103042533 (si:dkey-13a21.4)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:amex04147]
    103042533 (si:dkey-13a21.4)
   04031 GTP-binding proteins [BR:amex04031]
    103042533 (si:dkey-13a21.4)
Membrane trafficking [BR:amex04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    103042533 (si:dkey-13a21.4)
Exosome [BR:amex04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103042533 (si:dkey-13a21.4)
  Exosomal proteins of other body fluids (saliva and urine)
   103042533 (si:dkey-13a21.4)
  Exosomal proteins of colorectal cancer cells
   103042533 (si:dkey-13a21.4)
  Exosomal proteins of bladder cancer cells
   103042533 (si:dkey-13a21.4)
GTP-binding proteins [BR:amex04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    103042533 (si:dkey-13a21.4)
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase MMR_HSR1 GTP_EFTU ATP_bind_1 Gtr1_RagA cobW AAA_22 AAA_16 AAA_24 AAA_5 PduV-EutP Septin AAA_7 MobB NACHT ABC_tran
Other DBs
NCBI-GeneID: 103042533
NCBI-ProteinID: XP_007237580
Ensembl: ENSAMXG00000032663
UniProt: A0A8B9H7E4 A0A3B1IQ02
LinkDB
Position
24:complement(297378..300968)
AA seq 217 aa
MRGLSDMMGDWTKPHLKLVLVGNSGVGKTSLMTRFVDHRFTNMYRATIGVDFLTKELTVD
KNTVILQLWDTAGSERFFSLGSALYRGAHCCLLVFDLGSDSSFRALDGWISEVLLQTDPA
DPAERGTFPFIVVGNKTDLQTRQVCSERVQQWCEGLGAEYFECSAKENTAVDSAFITAAR
AALRTFKHSAVDQTNNIQITDKDQEQHPNYRESKCSC
NT seq 654 nt   +upstreamnt  +downstreamnt
atgaggggattatctgatatgatgggcgattggactaaaccccatctgaagttggttctg
gtgggaaactctggggtggggaaaacctcactgatgacgcggtttgtggaccatcgattc
actaatatgtaccgagccacgattggagtggatttcctgactaaagagctgactgtggat
aaaaacaccgtgattctgcagttgtgggacacggctggttctgagcggttcttctctctg
ggttctgctctgtaccgcggggctcactgctgcctcctggtgtttgatctgggttcagat
tcctctttcagggctctggacggctggatctctgaggtcctgctgcagactgacccggct
gacccggccgagcgcgggaccttcccctttatagtggtggggaacaagacggacctccag
acccggcaggtgtgttctgagcgtgtgcagcagtggtgtgagggtttgggggctgagtat
tttgagtgcagcgctaaagagaatacagctgtagattcagcttttataactgcagcccga
gcggctctccgtacctttaaacacagcgctgtggatcaaacaaacaacatccaaatcacc
gacaaagaccaagaacagcatccgaattacagagaatcaaaatgctcgtgctga

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