Astyanax mexicanus (Mexican tetra): 103042544
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Entry
103042544 CDS
T05042
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amex04990
]
103042544 (snx13)
Domain-containing proteins not elsewhere classified [BR:
amex04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
103042544 (snx13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
HipN
Motif
Other DBs
NCBI-GeneID:
103042544
NCBI-ProteinID:
XP_022524244
Ensembl:
ENSAMXG00000004675
LinkDB
All DBs
Position
3:complement(2696644..2745683)
Genome browser
AA seq
1001 aa
AA seq
DB search
MGNLVTVTSYRASDGDWDYVYLHPCLQCDPFGALLNLKQASLSIWGWGGLGVVLFLITFG
PFAIFYLAFYIFCFVGGGFAVTLLFGKTNSEKHLEKCEHSYLPPTPTGIAKTLEELKQET
KQIKIDRRLTGSNIIDEPLQQVIQFALRDYIQYWYYTLSEDESFLLEIRQTVQNALVQFS
TRSKEVDWQPYFTTRLVDDFATHLRVFRKAQERLNERDDLKQRDAPEELLDAFFEAEVEM
ERKICRDMVCTSHKDEEGFLRDLCEVLLYLLLPPGDFHNKNMRYFLREILARGVLLPLIN
QLSDPDYINQFVIWMIRDSSCNYEAFMNILKLTDKPAELEAVKDKVLEELQYLRSLDTAG
DDINVIKNQINSLLFVKKVCETRIQRLQSGKEVDALKLAANFGKLCIIPLDHILVHNIAL
QFFMDYMQHMGGQADLFFWLTVEGYRVTAQQQLEVMQSWQKDGKKQSSQTKGLLKAAALG
VYEQYLSEKASPRVQVDEASLNRLAEKLNKEDPTPEIFDDIQRKVYDMMLRDERFYPSFR
QHPLYVRMLAELDMLKEPSYRGSDDGDGESFNGSPTGSINLSLDDLTNAAMDESLQLHAF
ISDTVADASLNQIPVPGVCNDHGKTYALYAITVFRKNPDGSEDTWKTYRRYSDFHDFHMR
ITEQFENLNSILKLPGKKTFNNMDRDFLEKRKKDLNAYLQLLLNPEMVKACPSLLPYIHD
FLENKAYSKGKGDFARKMDTFVNPLRSSMRNVSNAVKSFPDSLAEGMTKMSDNMGRMSER
LGQDIKQSIFKVPPMLPKSDIDPEHCRVSAQLDDNVDDNIPLRVMLLLMDEVFDLKERNQ
WLRRNIKNLLQQLIRATYGDTINRKIVDHVDFMTSPEQVADYVKRFRDSYWPNGILAETP
PRRDKSIRMRTRVAAKTNLLGIMPDELKHIIGADTTRKGILRVFEMFQHQQLNRRLAYVF
LEGFLETMFPQYKFPELFVKLHSRSPRMRAFQQKVRSLQKR
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggggaacctggttacagtgacctcctacagagcctctgacggagactgggattatgtt
tacctgcatccgtgcctgcaatgtgacccgtttggggctctgctcaatttgaaacaggcc
agtctgtccatctggggatgggggggtctgggagtcgtgctcttcctcatcacattcgga
ccttttgctatcttttacctggcgttttatatcttctgttttgttggcgggggctttgcc
gtcacccttttgtttggaaagacaaactcagagaaacacctagagaagtgcgaacactcc
tatctgcctcccacaccaactggcatagcaaagactttagaagagctgaagcaagaaacc
aagcaaataaagatcgaccggcgcctgacgggatccaacatcatcgacgagccgctgcag
caggtgatccagtttgcgctgagggactatatccagtactggtattacaccctgagtgag
gacgagtccttcctgctggaaatcaggcagacggtgcagaatgctctcgtccagttctcc
acaaggtctaaagaggtggactggcagccttatttcaccacaagactggtggacgatttc
gccacccacctccgcgtcttcagaaaggcccaggagagactaaacgagagagacgacctc
aaacagcgtgacgcccctgaggagctgttggatgcgttcttcgaggcggaggtggagatg
gagaggaaaatctgcagggacatggtgtgtacctcccacaaggacgaggaaggtttcctg
cgggatctgtgtgaggtgctgctgtatctgttactacctcctggagacttccacaacaag
aacatgagatacttcctcagggaaattttggcgagaggagttctgctaccactgattaac
caactgagtgatccagattatatcaatcagtttgtcatctggatgatccgggactccagc
tgcaactacgaagccttcatgaacatcctcaagctgaccgacaagccggccgaactggag
gccgtcaaagacaaagtgctggaggagctccagtacctccgctcattagatacagcggga
gacgatattaatgtgatcaagaatcaaatcaacagtttactgtttgtgaaaaaagtctgc
gaaacaagaatacaaaggctacaatcagggaaggaagttgatgctttgaagcttgcagcc
aattttgggaagttgtgtataatcccactggatcatatcctggtgcataatatagctctg
cagttctttatggactacatgcagcacatggggggtcaggcggacctgttcttctggctg
actgtggaaggataccgggtaacagcacagcagcagctggaggtcatgcagagctggcag
aaggacggcaagaagcagagcagccagactaaaggcctgctgaaagctgctgctctgggt
gtttatgagcagtacctctctgaaaaggcttctcccagagtgcaggtggatgaagcttct
ctgaacagactggcggagaaactcaacaaagaggatccaactccagagatatttgatgac
atccagagaaaggtttacgatatgatgttgagggacgagcggttctacccgtcctttcgg
cagcatcctctgtatgtgcgcatgctggcagagctggacatgctgaaggagcccagctac
cgaggctcagatgatggagacggagagtccttcaatggatccccaactgggagtattaat
ttgtcattggatgacctcactaatgctgccatggatgagtccctacagctacatgctttt
atctctgatactgtagctgatgcttctctaaaccaaattcctgtgccaggcgtgtgtaac
gaccacgggaagacttacgctctctacgccatcaccgtcttccgcaagaacccggacggc
agcgaggacacgtggaagacctaccgccgctacagcgacttccacgacttccacatgcgc
atcacagagcagtttgagaacctcaactcgatattaaaacttcccgggaagaaaacgttc
aacaacatggacagggacttcttggagaagaggaaaaaggacctcaatgcttacctgcag
cttcttttaaatccagagatggtgaaagcttgccccagcctcctgccatatatccacgat
ttcctggagaacaaggcttacagcaagggcaagggtgactttgcgcgaaagatggacacg
tttgtgaatcctctgcgcagctccatgcggaacgtgtcgaatgctgtgaagtcttttccc
gacagtctggcagaaggaatgaccaaaatgtcagataacatgggccgcatgtccgagagg
ctgggtcaggacatcaaacagtccatattcaaggtgccgcccatgcttccgaagtcagac
atcgaccccgagcactgcagagtttccgcccagctggacgacaatgtggatgataacatc
ccgctgcgtgtgatgctgctgctgatggacgaggtgtttgacctgaaggagaggaaccag
tggctgcggaggaacatcaagaatcttctgcagcagctcatcagagcaacctatggagac
accatcaacaggaaaattgtggatcatgtagacttcatgacttctcctgaacaagtagcc
gactatgtaaagagatttagagattcctactggccaaacgggatcctggcggagacgccg
cctcgcagagacaagagcatccgcatgagaaccagagtagcagccaagaccaacctcctg
ggaatcatgccagacgagctgaagcacatcatcggggcggacaccacgcgcaagggcatc
ctgcgggtcttcgaaatgttccagcaccagcagctgaaccgccgcctggcctacgtcttc
ctcgagggctttttggagaccatgttcccacagtacaagttccccgagctgttcgtcaag
ctgcactcgcgctcgccacgcatgcgcgccttccagcagaaagtccgcagcctgcagaag
aggtga
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