Astyanax mexicanus (Mexican tetra): 103042545 Help Entry 103042545         CDS       T05042                                  Symbol dchs2 Name (RefSeq) protocadherin-23   KO K16507   protocadherin-16/23 Organism amex  Astyanax mexicanus (Mexican tetra) Pathway amex04519   Cadherin signaling Brite KEGG Orthology (KO) [BR:amex00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04519 Cadherin signaling     103042545 (dchs2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:amex04515]     103042545 (dchs2) Cell adhesion molecules [BR:amex04515]  Cadherins   Cadherin related    103042545 (dchs2) SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Cadherin_FAT4_N Cadherin_CELSR2_9th Ig_Cad99C_N Ig_CLSTN Cadherin_2 RET_CLD1 MmeI_N Invasin_D3 Motif Other DBs NCBI-GeneID:  103042545 NCBI-ProteinID:  XP_022522918 Ensembl:  ENSAMXG00000001379 LinkDB All DBs Position 25 Genome browser AA seq 3260 aa AA seqDB search MPHLCTLLQCALPVLVLTWNGLSAQVHHLRLQVQEGLPASTVVGDLRAALPSGSGVSGFF ISESRDSEVFRDLEIDSDSGIISTAASLDRERRDRYEFAAATLTGEVIRVTVVVKDVNDH WPTFPAEAVELNVSESSLPGSRFELPGALDLDEGQFGTQGYRLLTGRAEELFKVELRTGG GSTILNFDLVLMEKLDREGQDLYSLTVEAFDGGVPPKTGHLQVHVNVLDENDNPPVFNQS EYQAVLWENAPLLTPVCQVFAVDPDLGNNGLVTYEINRRQSDPNEFFIVDKNTGVILLNK PLDYETQTFFELVVTAKDHGVQPESSNTFVGIKVLDVNDNSPNINLLFLSESGDPEVSEG AAYGEYVARIAISDPDLGEIKKVSVFLEGGDQKFTLKATDEFLYALCVDGPLDREQKDLY ELTVVASDFGSPPLRSERTFLLQVTDVNDNPPSFEQKVYEVSVPEDLPAGGSVLQVKALD RDQDSGIFYSILRSTQDHLLNIHPQSGIISTAAGLDREREADLAFLVVAVDGGFPPLTST ATVNIHVEDINDNKPVFTQQLYNTTIQEHLPNATCFLQVSAEDADGGEYGMVHYSFSDGY NGEDSHPLFHINPVTGDICVSQDIDRDEGLLTFDLLVKAEDQGGLWSQAYLHIDVEDVND NAPVFNPEKYVTSVSSYTQPGAEILSVIATDRDSGHYGQITYELLPGDSSSLFSVHQSTG TVSLSSPLSALGIGSFRLGVSAQDSSGVAAVRPADIIINVLHTDYAPALFHQSHYTFSIP EDTPPGTAVGAVQAIKPLNSVEALSYRISSGDPLCLFSVDPRSGVISTSLTLDHESTAYT LLTLQALTGSLPVYSTTQVNITITDTNDNPPVFPKTSDYITISHNTPPGTILFLAHAHDA DSGENGRIHYSLRPQSEVFSIHPQLGMLTLNGYISRDANRRYRLSVVAEDEGSPSLSSSL NLVVELDSSNPAEETLAFETLIYQVEIGEGAQRDTRVIQVRAHASKTRRGSDLTPVLKYS LEPLSKPPPFLLHPDTGWLFVAQSLDYESEPSYRFTVRAEAQSAAANLTATATVVVTVQD ENDNAPVFSRDRFFFRVPEGPSPHGLIGAVKATDRDSRKNGQLSYILLSDGKHFRINSKT GEIINWVALDREEHSHHTLRVLVTDNGHPRLNASTTVHILVSDINDNPPEFTHLPANKQL NVQVWSGLPEGSVVTSMFAKDRDAGENATVTFSLISGNGHFDIDGESGDIRVTAGFLFNP YTNYTLTVVARDSGPVPLEQTALVHIQVHASPKQNDVLGLRQFTVKENTQLGTVIGSFQV SGSSSTQVRYSVAEGDGSLHFGIDSCSGALYVAQPLDYEATQRYFLIVRAEALPAVNATV PVSVSVEDVNDHSPWFPGKDSIVVIGVEEDVAVGTVVYTFNARDGDGSVRNSAIHYSMTF DPDSSVEEEPPFRIDPDSGSVSTTAELNRERLQSFSFTVTAGDRAENTDAQRFTSITAQV FLLDVNDNTPVFVSTETLQVAENVQVGSLIFHLLATDEDEGENGHVTYSLIGGNKGGHFR LERTGYLYLNSSLNYESQHAFSLTVQASDCGLPSLSSTQTLSVEVLDVNDEVPVFQRRVY LANVSENREPGEPVVRVTAVDLDSEENGMVSYSLLPGSGYEFFTIDSHTGLISTSTQLDR EIHQSFTLRVQAEDSGATPLSSTATVLCSVLDENDNAPEFSQPSFYITIPENLHPGAIHT TQASDPDRGVNRTLRYFIQNPDGRFSVDPVSGVVSTLKALDREERCNYTLILTASDQGPS PLTSTTLLSISLSDQNDNSPAFSRKSYRASVSEGLPVGSQILQLIASDPDEGPNGDVTFS LAEDTFGTFSVDPETGVVLLTKPLDRETRSQHTFRAIATDNCSQGPRSSVTIVTVQVEDL NDNPPACFKEPTQIIINTRGNAYPGQPITTVTAYDPDYRENGTVVFGLEEEDELFQVDRL SGEVRLKTTLSGGASGTRMLSVLASDQGTPALTSTCLLLVQLNGEQPLLQFTETVYEMSL PENSKTGSWVGNVVAHDQTAQRSSVRYSIFSGNENGAFSINPSTGDITVRDPALLDFEVE RRIHLVLLVENGRQSAYARASVSLQDLNDNAPVFKQSLYRTAVWEGQIHNTYIMQVMAMD YDSGLNGQIEYSIVEGNHNNAFIIDSVRGILATNAVLDREITSSYRLVLEAKDSGSPPLT GSCTVRVQVVDVNDNSPAIPAVEPLVVAENLPAGHMVTQIMANDVDLNSAIIYSLAGHGE EDGSFAIDRYSGVITTTRTLDYEEQVLHTLRIRASDSIHQTEAELTVQVLDVNDNAPIFS LEFYQVSLSELTSADSFVVAVSATDRDSGLNGKISYRLLSSLMKGFYVDAENGSIYTSKP LKYVTSDHHVIRLLVEARDSGDPSLSSITSVDVLVEDCNDHAPFFQNNSYQVSVGEDTPA GSLLLTLQAEDQDYSDQNTHLDYTITAGNEQRRFCVEVVSVPSETLQRTVGYLILCAGLD REITEVYSLTVTVTDRGVPPLNSSATVSVFVLDVNDHEPVFNSSEYHAQASENSLVGTIL VLVSAQDLDLGANGTVQYNIISGNSKGLFRLDPQTGSLEVSDTLDYEEDTKHILTVQASD GGVPGDRKVSFAVIFITVLDENDNSPFFMFSTINCSVAENLPAFTPVCMVHAVDQDAGTF GLLTYSILTSCFMDYGSGNPDRKEAFAIDPLTGDIHTRQTFDYERDSEYCFLVEARDKGD QTATVKVQVDIEGMDEFSPVFTQKVYQFALPDNARIGESVGHVMAMDHDGGLDGIVQYSL VNLSPFFNINKTTGSVYISNPVYRRKGSALNEEVEDLSILASSPKLDSRSTACRVIVNIS NSAEALTGTSLSVQTVSLSVSLTVFLLLLISFVALVLRYKTKENALKKAASLAANLNHGT GNFGRLGSYPQNGISAINLQDLHAPLDMRAKRDISNPLRSSGSSGRGSAEGETAEDQEIK MINEYQRMKQPAAVMLEPDTGIPIDSDQLSCHSVDAHVVAGANLGAGHMVEMASAESLHT FKEEGGGEGMLPRVVNMREMEEIMRCCMPLPDHQDSIEGSLTNLICPEEQLRGSYSWDHL LNWEPRFQPLASVFTDIGMLPDEEAGDKPAGPAEFHSLLRPPPLITGVAQPGIRAVPPRM PQRIVSLGRKPSYPKYAYSPLARNTGLTPSVMTPSFSPSLSLLTLRTPNASPVVSETGVG SFPKVAPLPGDISVEAEIRV NT seq 9783 nt NT seq  +upstreamnt  +downstreamnt atgcctcacctgtgcactctgctgcagtgtgccttacctgtgctcgtgctcacctggaat ggcctgagcgctcaggtgcatcacctgcggctgcaggtgcaggagggtctcccagcctcc acggtggtgggggacctgagggccgccctgccctcggggtcaggggtcagcggcttcttc atctccgagagcagagactcggaggtgttccgggacctggagatcgactcggactctggg atcatctccacggctgcctcgctggaccgggagcgcagggacaggtatgagtttgccgcc gccacgctgaccggagaggtcatcagggtcacagtggtggtgaaggacgtaaatgaccac tggcctactttccccgcggaggccgtagagctgaacgtgtccgagtcgagtcttcccggc tcgcggttcgagctgcccggagctctggatctggacgagggtcagtttgggactcaaggt tacagactgctgacaggtagagcagaggagctgtttaaggtggagctccgcactggtgga ggaagcaccatcctcaactttgacctggttctcatggagaagctggaccgagaaggtcaa gatctctacagcctgaccgttgaggcctttgatggaggtgttccaccaaaaacaggtcat ctgcaggtgcacgtcaatgttctggatgaaaacgacaaccctcctgttttcaaccagagc gagtaccaggcggtgttgtgggaaaacgcaccactgttgacccctgtgtgccaggtgttc gctgtggaccccgatctagggaacaacggcctggtcacctatgagatcaaccggcgtcag agcgacccaaacgagttcttcattgtcgacaagaacacgggagtcatcctcctcaacaag cctttagactatgaaacccagaccttcttcgagcttgtcgtgacggcgaaggaccacggg gtccaacctgagtccagcaacactttcgtgggcatcaaggttctggatgttaatgacaac agccccaatattaacctgctgtttctgagtgaaagcggagatccagaggtatcggaaggt gctgcttacggggaatacgtggccagaatcgccatttctgatccagacctgggagagatt aaaaaggtcagtgtgtttctggaaggtggagatcagaagttcaccctgaaggcgacggat gagttcctgtacgcgctgtgtgtggacggcccactggaccgggagcagaaggacctgtac gagctcaccgtggtcgcctcggattttggatccccccctttgaggagtgaaaggacgttt ctgctgcaggtgacggacgtgaacgataacccccccagctttgagcagaaagtgtatgaa gtcagcgttcccgaggacctgccggctggaggctccgtcctgcaggtgaaggccctcgac agggaccaggactccggcatcttctactccatcctgcgctccactcaggaccacctgctg aacatccaccctcagagcggcatcatcagcacggctgcaggcctggaccgggagagggag gctgacctggccttcctggtggttgctgtggatggagggtttcctccgttaacctccaca gccacggtgaacatccacgtggaggacatcaacgacaacaagcctgtgttcacccagcag ctctacaacaccaccatccaggagcacctgcccaacgcaacctgctttctacaggtcagt gctgaggatgctgatggaggagagtatggaatggtgcactattcgttttctgatggctac aacggtgaagactcacatcctctcttccacattaacccggtaactggggacatctgtgta tctcaggatattgaccgagatgagggcctgctcaccttcgaccttctggtgaaagcagaa gatcagggaggtctgtggtctcaggcgtatcttcatatcgatgtggaggatgtaaatgat aacgctccggtgtttaatccagagaaatacgtcactagtgtgagcagttacactcaaccc ggagccgagatactcagcgtcatcgccaccgaccgagactctggacactacggacaaatc acatacgagcttttacctggagactcctcctccctgttctcagtccaccaatccacaggt acagtctcgttgtcctctcctctctctgctctgggtatcggcagcttcaggctcggcgtt tctgcgcaggacagctcaggtgttgctgctgttcgacctgctgacatcatcattaacgtc ctgcacacagactacgcccccgcgctcttccaccaatcacattacaccttctctatccca gaggacacgcccccgggcacagctgttggggcagtgcaggccatcaaaccactcaattca gtggaggctctttcgtaccgtatctcttctggagaccccctgtgtttgttctcagtggac ccccggtcgggagttatctccaccagcctgactctggaccacgagtccacggcctacacc ctgctgaccctgcaggccctcaccggctccctgcccgtctacagcaccacccaggtcaac atcaccatcaccgacaccaacgacaacccgcctgtgttccccaagacctccgactacatc accatatcccataatactccacccggcaccatcctcttcctggctcacgctcacgatgcg gacagcggcgagaacgggcgtatccattattctttacgccctcagagcgaagtcttctca atccaccctcagctgggaatgctaactctcaacggctacatctccagagatgctaatcgc aggtacaggctgagcgtggtggctgaagacgagggaagtccatcgcttagctcttcactc aatctggtggtggagctggattcctccaaccctgcagaggaaaccttagcgtttgagacg ttaatctaccaggtggagatcggagaaggagctcagagagacactcgagtgattcaggtc cgagctcacgccagcaagacccggcgagggtcggatttaaccccggttctcaaatattca ctggagcccctttccaaacccccgccgttcctgctccaccctgacaccggctggctgttt gtggctcagagtctggattacgagtcagaaccttcctacaggttcaccgtccgcgcagag gctcagagcgccgctgctaatctcaccgctacggccacggtggtggtgacggttcaggac gagaacgataacgctcctgtcttcagcagggacaggtttttcttcagagttccagaagga ccttctcctcacgggctgattggtgcggtgaaagctacggacagagactccagaaaaaac ggacagctgtcctacatccttctgtctgacgggaaacacttcagaatcaactccaaaaca ggagagatcattaactgggtggctctggatcgtgaggaacattctcaccacactctgaga gttctggtgactgataacggtcatcctcgtctcaatgcctctacgaccgtacacatcctg gtctctgacatcaacgataacccacctgagttcactcacctgcccgccaacaagcagctc aacgttcaggtgtggtctggacttccagaaggatcagttgtaaccagtatgtttgcgaag gaccgagatgcaggagagaacgccaccgtcacgttctctctcatttcaggaaatggtcat tttgatatagacggtgagagtggagatatcagggtcactgctggattcctgtttaacccc tacactaactacactctcactgtggtggccagggacagcggccccgttcctctggagcag actgcactcgtccacatccaggtgcatgcttcaccaaagcagaacgatgttctgggtctc aggcagtttacagtgaaggagaacacccagctgggaaccgtaattggttctttccaggtt tctggatcctccagcactcaggtgcggtactccgttgccgagggcgacgggagtttgcac ttcggtattgactcgtgcagcggtgctctgtacgtagcgcagcctctggattatgaagct acgcagcgctacttcctaatcgtgcgagccgaggccctgccggcggtgaacgccactgtg cccgtgtctgttagcgtcgaggacgtcaatgatcactccccttggttcccaggcaaggac agcatcgtggtgattggtgtcgaggaggatgttgccgtgggaacggtggtgtacaccttt aacgcacgggatggggacggtagtgttcgtaacagtgcgattcattattccatgaccttc gacccggactcttctgtagaggaggagccacccttccgcattgaccccgactctggatct gtctcaaccacagcggagctgaatcgagagcgtctgcagagtttctccttcaccgtcacc gccggagaccgggcggagaacaccgacgcccagcggttcacctccataaccgcccaggtg ttcctgctggatgtaaacgacaacacacctgtctttgtttccacggaaacacttcaggta gcagagaacgtccaggtgggaagcctcatctttcacctgctggctacggacgaagatgag ggagaaaacggtcatgtgacttacagcctgattggtggaaacaaaggtggacacttccgc ttggagagaacaggttacctgtacctgaattcttctctgaactacgaatcccagcatgcc tttagtctcacagtgcaggcctcagactgtgggcttccgtctctctccagcactcagact ctcagcgtggaggtgctggacgtgaacgacgaggtgccggtgttccagcgccgcgtttac ctcgccaacgtctccgagaaccgagagccgggagaacctgtggtcagagtgaccgctgtc gacctggactcagaagagaatgggatggtgagttacagcctgttacccggttctgggtac gagttcttcaccatcgactctcacactggcctgatcagcacctccacccagctggaccga gagattcatcagagcttcacgctcagagttcaggcagaagacagcggggccacgcctctc tccagcactgccaccgttctctgctctgtactggatgaaaatgataacgctcctgaattc tcccagccctccttttacatcacaataccggagaacctccacccaggagccattcacacc acccaggcctccgaccccgaccgcggagtcaaccgaaccctgcggtactttatacagaat ccagacggccgtttctccgttgatccggtgagcggagtcgtcagcactctgaaagctctg gacagagaagaacgctgtaactacactctgatcctcaccgccagcgatcagggtccatct cctctaacctccaccaccctgctctccatctctctctccgaccaaaacgacaacagcccc gccttcagccgtaagagctaccgggcctcggtcagcgaggggctgcccgtcggctcccag atcctccagctcatcgccagcgaccccgacgagggtccgaacggagacgtcaccttctcg ctggccgaggacacgtttggaacgttctccgtggatcctgagacgggtgtggttctcctg accaaacctctggacagagagacgcgctctcagcacacgttccgcgccattgctacagac aactgcagccaggggccacggagctccgtcaccatcgtcactgtacaggtggaggacctc aacgacaacccacctgcctgcttcaaagaacccacccagattataatcaacaccagaggt aatgcatatccaggccagccaatcaccacagtgacagcatatgatccagactaccgggaa aacggaacagtggtgttcggtctggaggaggaagatgagctgtttcaggtggacaggtta tctggagaggttcggctgaagaccacgctgtccgggggagcatcaggaaccaggatgctg tcggtgttggcttcagatcagggaacacctgccctcacctccacctgtctgctgctggtc cagctgaatggagaacagcccctcctgcagttcactgagacggtctatgaaatgagttta cctgagaacagcaagacaggctcctgggtggggaacgttgtggctcatgatcagactgca cagagaagctcagtcagatacagcatcttcagtggcaacgagaacggagcgttcagcatc aaccccagcacaggtgatataactgtgagagacccggctctgctggattttgaggtggag cgcaggattcacctggtgcttctggtggagaacggccgtcagtcggcctacgccagagcg agcgtctccctgcaggacctgaacgataacgctcctgtatttaaacagagcctctacaga actgcagtgtgggaggggcagatccacaacacctacatcatgcaggtgatggcgatggat tatgacagtgggctgaacgggcagatagaatactccattgttgaggggaatcacaacaac gccttcattatcgactcggttcgcgggattttggccactaatgccgtcctcgaccgagag atcacctcctcttaccggttggttcttgaggcaaaggactcgggaagcccccccctcact gggtcctgcactgttcgggttcaggttgtggacgttaacgacaacagcccagcaatacca gcagtggagcccctagtggtggcagaaaatcttccagctggtcacatggtcactcaaatc atggccaacgatgtggacctcaactcagccatcatctacagcctagcaggacatggagaa gaagacgggagcttcgccatcgaccgttactccggggtcatcaccacaaccaggactctg gattacgaggagcaggttctccacaccctgaggatcagagcttcagactccatccatcag acagaggcggagctcaccgtccaagttctggatgtgaacgataacgcccccatcttctct ctggagttctaccaggtgtcgttatctgagctgacgtctgcagattcatttgttgtagcc gtttcagctacagacagagactctggactgaacgggaagatctcctacaggctgctttct tcactaatgaaaggcttctacgttgatgctgaaaatggttctatatataccagcaaacct ctgaagtacgtcaccagtgatcaccacgtgatcagacttctggtggaagctcgggatagt ggagacccctcgctctctagtattacgtctgtggacgtactggtggaggactgcaatgat catgcgccgttcttccagaacaactcgtaccaggtgagcgttggtgaagacacacctgct gggagcttactccttaccctgcaggctgaggaccaggattactcagaccaaaacacccat ctggattacaccatcaccgcgggaaacgagcagaggcgattctgcgttgaggtcgtcagt gtgccatcagagaccctgcaaaggactgtgggttatttgattctctgtgctggtttggac cgagagatcacagaggtgtactcgttaaccgttacggtgacggacagaggagttcctccg ctcaacagctcagctacagtatcggtctttgtactcgatgtcaacgaccacgagcctgtt ttcaacagctcagaataccatgcacaagccagtgagaacagtctggttggcaccatcctg gtcctggtctctgctcaagatcttgatcttggggcgaacggcactgtacaatacaatata atctctgggaacagcaagggtctgttcaggctggaccctcaaacaggttctctggaggtc agtgacactctggattatgaagaagatacgaaacatattttaacagtccaagcttcagat ggaggcgttccaggcgacaggaaggtatcctttgcagtcatcttcatcacagtgctcgat gagaatgataattctcctttcttcatgttctcaaccatcaactgctcggttgcagaaaac ctacctgcgtttaccccagtgtgcatggtccacgctgtcgatcaggacgcaggaacgttt ggcctgttgacttattcaatcctaacctcttgtttcatggactacggcagtggaaacccg gacagaaaggaagcttttgcaattgaccctctcactggagacattcatacaaggcaaacc tttgactatgaacgagacagtgaatactgttttctcgtagaagctcgggataaaggagat cagacggctacggtgaaggttcaggtcgatattgaaggcatggatgagttcagtcctgtc ttcactcaaaaggtctaccagtttgctttgccagacaatgccagaattggtgaaagtgtt ggacatgtgatggccatggatcatgatgggggtctggacgggattgtacagtattcttta gtcaatctgtctccctttttcaacatcaacaaaactactggcagcgtttatatctcaaac cctgtctaccgaagaaaaggctctgctttaaatgaagaagttgaagacttgtcgattctg gccagcagtccaaagcttgattccagatcaacagcctgtcgtgtcattgtcaacatttcc aactctgctgaggcactaactggtacgtctctcagtgtgcagacggtcagccttagtgtc tccttaacggtattccttctgcttttgataagttttgttgctctagtgttgaggtacaag accaaggagaacgctctgaagaaagcagcttcattagctgcaaatctaaaccacggcaca ggaaactttgggcgattgggcagctatcctcaaaacggcataagcgctataaatcttcaa gatctgcacgcccctttggacatgcgagcgaagagggacatttctaaccccttgagaagc tccggctcaagcggtcgaggctcagcagaaggtgagactgccgaggaccaggagattaag atgattaacgagtaccagcgcatgaagcaacctgccgcagtgatgcttgagccagacact ggaatccctatcgattcagatcagctttcctgccactctgttgatgcacatgtagtcgct ggggctaatctgggtgcaggccatatggtggaaatggccagtgctgagagccttcatacc ttcaaggaagaaggcgggggtgaagggatgctacctcgcgtggtcaacatgagggagatg gaggagattatgagatgctgcatgcctttgccagaccaccaggattccatcgaaggctcc ctcaccaatctgatctgcccagaggagcagttgcgtggaagctacagctgggaccacctc ctcaattgggaacctcgatttcaaccgttggcatctgtctttactgacattggcatgctt cctgacgaggaagccggcgataaaccagcagggcctgcagagttccacagcctcctgcgc ccgcctccgctcatcacaggggtggcacagccaggcattcgcgccgtacctcctcggatg cctcagagaatagtatccctgggaagaaagccctcctaccccaagtatgcttactcacct ttagcaagaaacacgggactaacgccttcagtcatgacccccagcttctccccttccctt tccctcctgactctgaggactcctaatgcctcgcctgtggtttcagagaccggcgtgggc agtttccccaaggtggcgccgctgcctggagatatctctgtggaagcagagataagggtg tag

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