Astyanax mexicanus (Mexican tetra): 103042564
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Entry
103042564 CDS
T05042
Symbol
cnga1a
Name
(RefSeq) cyclic nucleotide gated channel subunit alpha 1a
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
103042564 (cnga1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amex04040
]
103042564 (cnga1a)
Ion channels [BR:
amex04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103042564 (cnga1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Nop14
EMC3_TMCO1
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
103042564
NCBI-ProteinID:
XP_022537349
Ensembl:
ENSAMXG00000043371
LinkDB
All DBs
Position
25:complement(2008438..2017395)
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AA seq
716 aa
AA seq
DB search
MTIVTNKTTLAVPPSGEDNEDPRPPATPRRLFNVNNSNNNEEEEKDKKETKENKEKKEKK
EKKEKKKKKEDKEQENEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKPK
DKDKDKKEGPKEVFVINPASNLYYQWLLLITCPVMYNWTVIIARASFEDLQHKYLMTWFF
LDYICDLLYAADVAFRARTGYLEQGLLVKDEKLLLKHYTSSFQFRLDVVSMIPTDVLYFV
LGLDYPEIRINKLLRISRMFEFFDRSKAMTNYPNLFGICTLVMYIIIIIHWNACMYFSFS
KAIGFGADPWVYPSLEEPEFGDLLRKYSFSLYWSTLTLTTIGEMPSPEQDSEFFFHVVDF
LMGVLVFATIVGNIATMISNMNAAQAKFQARIDNIKQYMHVRHVSKDLEVRVIKWFDYLW
TNKKAQDEREVLRYLPDKLRAEIGMNVHLDTLKKVRIFADCEAGLMIQLVLRLQPQVFSP
GDYICRKGDIGREMYIIKEGKLAVVADDGITQFCVLGDGSYFGEISILNIKGSKAGNRRT
ANIRSIGYSDLFCLTKDDLMEALTEYPEAKTMLEDKGRQILLKDGLLDLDPANIKPDQKD
LEERVNRIYGTMMLMQVKVKKLLGDYEKTEKNLKQRIKLMERYTGEEVEEEEEEEEEVKE
EEKKEEDAAPEPEKKDDEEEKPAEEKKAEEEEETKPEEEEEEDKKTDEEEKMKTDE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgacgattgtgaccaataagacgactcttgcggtgcctccttcaggagaagataatgag
gatcctcgtcctcctgcgactccgagacgcctcttcaacgtgaacaacagcaacaataac
gaggaagaagaaaaggacaaaaaggagacaaaggagaacaaagagaaaaaagagaaaaag
gaaaagaaagaaaagaagaagaagaaagaagacaaggaacaggagaatgagaaagagaag
gaaaaggaaaaagagaaggaaaaggagaaggaaaaagagaaagaaaaagagaaggaaaaa
gaaaaagaaaaggaaaaagagaaggaaaaagaaaaagaaaaagagaaggaaaaaccgaaa
gacaaagataaggacaaaaaggaagggcctaaggaggtgtttgtgattaatccagccagt
aacctgtattaccagtggctgctgctcatcacctgtccagtcatgtataattggacagtc
atcatcgcaagagcaagttttgaagatctccagcataaatatctgatgacatggttcttc
ctcgactacatctgcgatttgctttatgctgctgatgtagccttcagggcacggactgga
taccttgagcagggcttgctcgtcaaagacgagaagctcctgctcaaacactacacgtcc
agctttcaattccgacttgatgtcgtctccatgatccccactgacgtgctgtacttcgtc
ctggggctggactaccccgagatccgcatcaacaaactgctgcgcatcagccgcatgttc
gagttcttcgaccgctccaaggccatgaccaactatcccaacttgtttggcatctgcact
ttggtcatgtacatcatcatcatcatccactggaacgcatgcatgtacttctctttctcc
aaagcaatcggctttggtgcggatccctgggtttacccttcgctcgaggagccggagttc
ggggaccttttgagaaagtactccttcagcctttactggtccaccctcacgctcactacc
attggtgaaatgccctcccctgagcaggactctgagtttttcttccatgtggtggacttc
ctgatgggtgtgctggtcttcgccacgattgtgggcaacatcgccaccatgatctcgaac
atgaacgcagcgcaggccaagttccaggctcgcattgacaacatcaagcagtatatgcat
gtgcggcacgtcagcaaggacttggaggtgcgcgtcatcaaatggttcgattacctgtgg
accaacaagaaggcgcaggatgaaagagaggtgctgaggtatcttccagacaagctgcgg
gcggaaattggcatgaacgtacatctggacaccttaaaaaaggtgaggatctttgcagac
tgcgaggctggcttgatgattcagttggtgctcaggttgcaacctcaagtcttcagtccc
ggtgactacatctgccgcaaaggtgacatcgggcgcgagatgtacatcatcaaggaagga
aagctggctgtggtggctgatgacggaattacacagttttgcgttctgggtgatggcagc
tactttggggagatcagcatcctgaacatcaagggcagcaaagccgggaaccggaggacg
gccaacatccggagcatcgggtactctgacctcttctgtttgaccaaggatgacctgatg
gaggccttgactgagtaccccgaagccaaaaccatgctggaggacaagggacggcagatc
cttttgaaagacggtctcctggacctggatccagccaatatcaaaccagaccagaaggac
cttgaggaaagagtgaaccgcatttacggcaccatgatgctgatgcaggtcaaagtcaag
aagctgcttggagattacgagaaaaccgagaaaaacctcaaacagcgcatcaaactgatg
gagcgttacacaggggaggaggtggaagaggaagaggaggaggaggaggaggtaaaggag
gaagagaagaaggaagaggatgctgcaccagagccagagaagaaagatgatgaggaggag
aagcctgcagaggagaagaaggctgaggaggaggaggaaacaaagccagaggaggaggag
gaggaggataagaagacagacgaggaagagaagatgaagacagatgagtag
DBGET
integrated database retrieval system
