Astyanax mexicanus (Mexican tetra): 103042616
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Entry
103042616 CDS
T05042
Symbol
ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amex03021
]
103042616 (ctr9)
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
103042616 (ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_16
TPR_8
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
ARM_TT21_5th
TPR_Slam
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
103042616
NCBI-ProteinID:
XP_007254723
Ensembl:
ENSAMXG00000010162
UniProt:
A0A8B9JWU5
LinkDB
All DBs
Position
16:complement(35832322..35851503)
Genome browser
AA seq
1162 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKDLINQSTLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFGRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLER
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLYAANGIGAVLAHK
GYYREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKYQNTEVL
LYLARALFKCGKLQECKQMLLRARHVAPNDTVLMFNIALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLSKAGDKMRFDLALASSEARQCSDLLSQAQYHVARARKQDEEEKE
LRAKQDQERELLRQQLVKEQEEKKIKEAEEQKKLLEQRAQYVEKTKNLLNFTEEMKESSK
EKKKGGGGGGRRKKGGEYDDFVNDDSDEDLPLKKRKKKKPRSGSEQEEEGGEEGETKPRK
KRRRPAKGEDGSDDEEGGSRPKKQRKPRERKKIERSKPERMPPSLKGKIKSKAIISSSDS
SSDEDGLKIAEDRNPRDSGSGSDEGGHRKRIASDSESDQGRKRSGSEAGSPRRSANSDDD
SGAERPVKRRRPRPQSDSEQSDNESKRSRSEGSEDESRRGSPAPASDQASDNEGSPRRSD
NESEPEGSNNEASNRGSDEDSD
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggatctatagaaatccccctgcgggacacggacgaggtgattgagcttgat
ttcgatcagctaccagaaggagacgaagtcatcagtatcctcaaacaagaacacacacag
ctgcacatatggatagcacttgctctggagtactacaagcagggaaagacggaggacttt
gtgaagctgctggaggcggctcgtatcgatggaaacctcgactacagagatcacgagaag
gaccagatgacttgtctcgacacgttagctgcgtactatgtgcagcaggctcgcaaagag
aagaacaaagatgcaaagaaggatctcatcaaccagtccaccctgctttacaccatggca
gacaagatcatcatgtacgatcagaaccacttgctgggaagagcttgtttttgcctgttg
gaaggggataagatggatcaggcagatgcccagtttcatttcgtcttgaaccagtccaca
aacaatataccggcactattgggtaaagcttgcatttccttcaacaaaaaggattacagg
ggagctttggcctactataaaaaagcactacgcacaaacccaggctgtccagctgaagtg
aggcttggaatggggcactgcttcgtgaagctcaacaagctggagaaagctcgcctggct
ttcggtcgtgcgctggagctcaactccaagtgtgtgggagctctggttggtctggccgtt
ctggagctcaacaacaaagaggctgactccatcaagaacggagttcagctgctctccaga
gcgtacaccatcgaccccagcaaccccatggtgctcaaccacctggcgaatcactttttc
ttcaaaaaggactacagcaaagtacagcacttggctcttcatgcctttcacaacacagag
gttgaagccatgcaggctgaaagctgctatcagctggcccgctctttccacgttcaggag
gactacgaccaggcttttcagtactactaccaagccactcagtttgcctcgtccaccttc
gtgctgccgttctttggtctgggtcagatgtacgtgtaccgcagagacaaagaaaacgct
gcacagtgcttcgagaaggtcttgaaagcttacccaaataactacgagaccatgaagatc
ctcgggtcactttatgccacctcagatgaccaggagaagagggatattgctaaaggccat
ctaaagaaagtcacagagcagtatcctgatgatgtagaggcctggattgagcttgcacag
attctggaacagacagacatccagggagcgttgtctgcgtacggcacggctacacgcatt
cttcaggagaaggttcaggctgacgttcctcctgagattctcaacaatttgggggctttg
cattttagactgggcaaccttggagaagcaaagaaatacttcctggcctctctggaaaga
gccaaagctgagggagaacacgacgagcattactacaatgccatctccgtcaccacctcc
tacaacctggcacgactctacgaagccatgtgcgagttccatgaggctgagaagctgtac
aagaacatcctgagagagcatccaaattatgtagactgttacttgcgccttggtgccatg
gctcgtgacaagggcaacttctatgaggcttcagattggtttaaagaagctctacagatc
aaccaggatcaccctgatgcttggtccctgattggaaatctccacttggccaagcaggag
tggggtccaggccagaagaagtttgaacgcatcctgaagcagccttctacacagaacgat
acctattccatgctggcactgggcaacgtgtggctgcagacactgcaccagcccacgaga
gatcgggaaaaggaaaagagacaccaagatcgagcgctagccatttataagcaagtgctg
aggaatgattccaaaaatctgtatgctgccaatggtatcggggctgttttggctcacaaa
ggctattaccgagaggctcgtgatgtgtttgcccaagtcagggaggcgactgctgatatc
agtgatgtctggctgaacttggcacatatttacgtggagcagaagcagtacatcagtgct
gtgcagatgtacgagaactgcctgaagaaattctacaagtaccagaacacagaagtgctg
ctgtatctggcgcgagctctgtttaagtgcgggaagctgcaggagtgcaaacagatgcta
ctgagggctcgtcatgtggcacccaatgacacagtgttgatgttcaacattgccctggtg
ctgcagagattggccacgctggtgctgaaggacgagaagagtaacctgaaagctgtgctg
agtgctgtgaaggagctggagctggcccacaggtacttcagctatctcagtaaagcagga
gacaagatgaggttcgacctggctctcgcatccagtgaagcaaggcagtgctcggacttg
ctgagccaggcgcagtaccacgtggcccgagcccgtaagcaggacgaggaggagaaggag
ctgcgggccaaacaggaccaggagagagagctgctgaggcagcaactcgtcaaagaacag
gaggagaagaagatcaaggaggctgaggagcagaagaagctgctggagcagagagctcag
tacgtggagaagaccaagaacctgctgaacttcactgaggagatgaaggagtcttccaag
gagaagaagaagggaggaggcggtggtggacggcgcaaaaaaggaggggagtatgatgac
ttcgttaacgacgactccgacgaagatctgcccctcaagaagaggaagaagaagaagcca
cgcagcgggagtgaacaggaggaggagggaggagaggagggtgagacgaaacctcgcaag
aagaggagaagaccagctaaaggagaagatgggagtgatgacgaggagggaggctcaaga
cccaagaaacagcgcaaacccagagagcgcaagaagattgagaggtccaaacctgagcgc
atgccaccgtctcttaaaggaaagatcaaatccaaagccatcatttcctcctctgactct
tcttctgatgaggatggcctgaagattgcagaggacaggaaccctcgggacagcggttcc
ggatcagatgagggggggcaccggaagcgcatcgcgtccgacagcgagtcggatcagggg
cgtaaacgctcgggcagcgaggcgggcagcccccgccgctccgccaactccgacgacgac
tccggcgccgagcggccggtgaagaggaggagaccgcggccgcagtccgactctgagcaa
tcagacaacgagagcaagaggagccgatccgagggatcagaggacgagtcccgccgcggc
tctcctgctccggcctccgatcaggcctcagataacgagggatccccgcgccgctcagac
aacgagtccgaaccagaggggtccaacaacgaggcctccaaccgaggctctgacgaggac
agtgactga
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integrated database retrieval system
