Astyanax mexicanus (Mexican tetra): 103042639
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Entry
103042639 CDS
T05042
Symbol
cnot7
Name
(RefSeq) CCR4-NOT transcription complex subunit 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103042639 (cnot7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103042639 (cnot7)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103042639 (cnot7)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103042639 (cnot7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
103042639
NCBI-ProteinID:
XP_007258686
Ensembl:
ENSAMXG00000008075
UniProt:
A0A8B9LDJ3
W5KL28
LinkDB
All DBs
Position
10:45490913..45501211
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AA seq
286 aa
AA seq
DB search
MPAATVDHSQRICEVWASNLDEELKRIRQVIRKYSYIAMDTEFPGVVARPIGEFRSNADY
QYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSG
IQFKKHEDEGIETLYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILSNSKLPEEEVD
FFDILRLFFPIIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK
MREMFFEDHIDDAKYCGHLYGLGSGSSYVQNGTGNAYEEEANKQQS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcagccactgtggatcatagccaaagaatatgtgaggtgtgggctagtaacctg
gatgaggagctgaagaggattcggcaggtcatccgaaaatacagttacattgcaatggac
acagagtttccaggtgtagttgcgaggccgattggagagtttagaagcaatgcagactat
cagtaccagttactgcggtgtaacgttgatttgttaaagattatccagcttggccttacc
tttatgaatgaacaaggggagtatcccccaggaacttcaacatggcagtttaacttcaaa
tttaacctcacggaagatatgtatgcacaggattcaatagagctactgactacatcaggt
atccagttcaaaaagcatgaagatgagggcattgaaacactgtattttgcagagctcctc
atgacttcgggtgtggtgctttgtgaaggcgtcaagtggctttcattccatagtggctat
gactttggttacctgatcaaaattctgtccaactccaagttgccagaggaggaagttgac
ttctttgacatcctcagattatttttccccatcatctacgatgtgaaatacctcatgaag
agctgtaaaaacctgaagggtggcctgcaggaggtagctgagcagctcgagctggagagg
attgggcctcagcatcaggcaggctcagactctctcctcactggaatggctttctttaag
atgagagagatgttttttgaggatcatattgacgacgctaagtactgtggtcacttatac
ggactgggctccggctcgtcctacgtccagaacggcaccggcaatgcctacgaagaggag
gccaacaagcagcagtcatga
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