Astyanax mexicanus (Mexican tetra): 103042739
Help
Entry
103042739 CDS
T05042
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103042739 (sox2)
Transcription factors [BR:
amex03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
103042739 (sox2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
FTP
Motif
Other DBs
NCBI-GeneID:
103042739
NCBI-ProteinID:
NP_001306894
UniProt:
A0A076VDC7
A0A8T2L7B4
LinkDB
All DBs
Position
16:complement(26412928..26569110)
Genome browser
AA seq
328 aa
AA seq
DB search
MYSMMETELKPPAPQPSTGGTGNSNNPGGNNQKSSPERVKRPMNAFMVWSRGQRRKMAQE
NPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKK
DKYALPGGLLAPGGGGVGVGVGVGVGVGSGVGAGMNQRMDGYAHMNGWSNGGYGMMQDQL
GYAQHAGLNAPMQTSATAPVHRYDMSALQYGSMTSAQTYMNGSPTYSSMAYSQQQSGPPM
TLHGSMSSGVKSESSASPPAVVTSSSHSRSAAAQPCQTGDLRDMISMYLPGADVQDQTGQ
SRLHLSQHYQGAPVHGTTINGTLPLTHM
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatggaaaccgagctgaagcccccggcccctcagccgagcactgggggc
acggggaatagcaacaaccctgggggcaacaaccagaaaagcagcccagagagggtcaag
agacccatgaacgccttcatggtgtggtccaggggccagcgcaggaagatggcccaagag
aaccccaagatgcacaactcggagataagcaagaggctgggggccgagtggaagctgctg
tccgagtccgaaaagagacccttcatcgacgaggccaagaggctccgcgcgctgcacatg
aaggaacacccggattacaagtacagaccgcggaggaaaaccaagacgttgatgaagaag
gacaagtacgcgcttcctggtggactcctcgcaccgggtggcggcggggtgggcgtcggt
gttggggtcggcgttggagttggctccggcgttggggccggcatgaaccagagaatggac
ggctacgcgcacatgaacggctggagcaacggcggctacggcatgatgcaggaccagctc
gggtacgcgcagcacgccggcctcaacgcgcccatgcagacctcggccacggcaccagtg
caccggtacgacatgagcgcgctgcagtacggctccatgaccagcgcgcagacgtacatg
aacggctcgcccacgtacagcagcatggcgtactcccagcagcagagcggaccccccatg
acactgcacggctccatgagctccggggtgaagtccgagtccagcgcgagcccaccggcc
gtagtcacatctagctcgcactcgcgctccgccgctgcccagccgtgccagacgggtgat
ctgagggacatgatcagcatgtacctgcccggtgcggacgtgcaggatcaaacgggccaa
agcagactgcacctgtcccagcactaccagggcgcacctgtgcacgggacgaccatcaac
ggcacgctgcccttaacgcacatgtag
DBGET
integrated database retrieval system
