Astyanax mexicanus (Mexican tetra): 103042820
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Entry
103042820 CDS
T05042
Symbol
kars1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103042820 (kars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
amex01007
]
103042820 (kars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amex03016
]
103042820 (kars1)
Enzymes [BR:
amex01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
103042820 (kars1)
Amino acid related enzymes [BR:
amex01007
]
Aminoacyl-tRNA synthetase
Class II (A)
103042820 (kars1)
Transfer RNA biogenesis [BR:
amex03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
103042820 (kars1)
Prokaryotic type
Other AARSs
103042820 (kars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
103042820
NCBI-ProteinID:
XP_022525787
Ensembl:
ENSAMXG00000030719
LinkDB
All DBs
Position
16:36468120..36482388
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AA seq
601 aa
AA seq
DB search
MLTLVRAARRQVCQAAGLRAQLTAPLLIQGCRWKGGKSELKRRMKAEKKAAEKDAKVKDQ
VPQNKDTNDKAQQNAYGADEETLDPNQYFKIRTQAIQALKGTAEDPYPHKFNVDLSLSEF
IEKYNHLEAGEQLTDVVLNVAGRVHAKRASGAKLLFYDLRGEGVKLQVMANSRNYKSEED
FVHINNKLRRGDIIGVRGNPGKTKKGELSIVPIEMTLLSPCLHMLPHLHFGLKDKETRFR
QRYLDLILNDFVRQKFVTRSKIITYLRSFLDQLGFLEIETPMMNLIPGGAVAKPFVTYHN
DLDMNLYMRIAPELYHKMLVVGGIDRVYEVGRQFRNEGIDLTHNPEFTTCEFYMAYADYY
DLIEITEKLLSGMVKHITGSYKVTYHPDGPEGQAYEIDFTPPFKRISMTHDLEREMGVKF
PPPETYDSDETRKFFDDLCAQKGVECPPPRTTARLLDKLVGDFLEVTCINPTFICDHPQI
MSPLAKWHRSQKGLTERFELFVMKKEICNAYTELNDPVRQRELFEQQAKAKAEGDDEAMF
IDETFCNALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPDDNKPAPPAEGTS
V
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccctggtcagagcagcccggcggcaggtgtgccaggccgctggcttgcgggct
cagctaaccgcgccgttgcttattcaaggatgtcgttggaaaggtggcaaaagtgagctg
aagaggcggatgaaagcagagaagaaagctgctgagaaggatgccaaagttaaagaccag
gtcccgcagaacaaggacaccaatgataaggctcagcagaacgcgtacggggctgacgag
gagactctggaccccaaccaatactttaagatccgcacgcaggccattcaggctctgaag
ggcacagcagaagacccctatccacacaagttcaatgtggacttgtcacttagtgaattc
attgagaaatataatcacctggaagcaggagaacagctgactgatgttgttctcaatgtg
gcaggtcgtgtccatgccaagagagcctcaggagccaaattgctcttctatgacttgcga
ggggaaggagttaagttgcaggtcatggcgaactccaggaattacaaatccgaggaagat
tttgttcacatcaacaataagttacgacgtggtgacattatcggtgtccgcgggaaccct
gggaagaccaagaaaggagaactgagcatcgtccccattgagatgaccctgctgtcaccc
tgtctgcacatgcttccccacctccacttcggcctcaaagacaaggaaacccggttccgt
cagcgatacctggacttgattctcaacgattttgtgagacagaagtttgtgacccgttct
aagatcatcacttacctgcgcagcttcttggatcagcttggtttcctcgagattgagact
ccaatgatgaacctgattcctggaggagccgtggctaagccttttgtcacctaccacaat
gatctggatatgaacctgtacatgaggatcgcccctgagctttaccataagatgctggtg
gtgggtggtattgaccgtgtgtacgaggttggccgccagttccgaaatgagggcattgac
ctcacccacaacccagaattcaccacctgtgaattttacatggcctacgctgactattac
gatctgatagagatcaccgagaagcttctctcagggatggtgaagcatatcacagggagt
tacaaggttacgtatcatcctgatgggcctgagggacaggcctatgaaattgactttact
ccgcctttcaaaaggataagcatgacccatgacctggaaagagagatgggagtgaagttt
ccacctcctgaaacctacgactctgatgaaactcgcaaattcttcgatgacctgtgtgcc
cagaaaggagtggaatgtccacctcccagaacaacggctcgtctgctagataagctggta
ggagactttctggaggtgacctgcatcaacccaacattcatctgtgatcatcctcagatc
atgagtcctctggccaaatggcacagatcacagaaagggctcactgagcgctttgagctc
ttcgtcatgaagaaggagatctgcaacgcctacacagagttaaacgacccagtcaggcag
cgagagctgttcgaacagcaggctaaggccaaagcagaaggtgatgatgaggctatgttt
atagatgagacgttctgcaatgcgttagaatacggccttccacccactgcaggctggggc
atgggcatcgaccgcctcaccatgttcctcactgactccaacaacatcaaggaggtgctt
ctcttcccagctatgaagcctgacgacaataagcctgctcctccagcagagggcacttca
gtttaa
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integrated database retrieval system
