Astyanax mexicanus (Mexican tetra): 103042875
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Entry
103042875 CDS
T05042
Symbol
colgalt2b
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex00310
Lysine degradation
amex00514
Other types of O-glycan biosynthesis
amex01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
103042875 (colgalt2b)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
103042875 (colgalt2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
amex01003
]
103042875 (colgalt2b)
Enzymes [BR:
amex01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
103042875 (colgalt2b)
Glycosyltransferases [BR:
amex01003
]
O-Glycan biosynthesis
O-linked Gal type
103042875 (colgalt2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
103042875
NCBI-ProteinID:
XP_022525909
Ensembl:
ENSAMXG00000041867
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All DBs
Position
12:complement(4926396..4964804)
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AA seq
603 aa
AA seq
DB search
MPPAGALRLAALVSLFSVSLLLSSDESPLLKPKVLIAIVARNAAHSLPYYLGCIENLQYP
KERIAIWAATDHNVDNTTAMLREWLKAAQSRYHYVEWRPMEEPRSYTDEWGPKHWSPSRF
NHLMKLRQAALKAARERWADYVLFADSDNLLTNPRVLDLMMAENRTLVAPMMESRSLYSN
FWCGITPQGYYKRTPDYQPIREWKRLGCFPVPMVHSTFLLDLRRSSSKSLAFYPPHPDYS
WAFDDIMVFAFSARQADVQMYVCNKEHYGFLPVPLKAHQSVKDEEESFTHTITEALIDHT
VKPSQLLFVPPKPRDMMGFDEIFLINLKRRTDRRERMLNTLDILGLEVTVTEAVDGKALN
SSKLQALGIEMMPDYKDPYSGRVLTRGEIGCFLSHHATWTEVVERGLQSVLVLEDDVRFE
PRFKKRLQTIMEDVEKAQLDWDLIYVGRKRMQVAQPEVSVEGVDNLVVADYSYWTLGYAL
SQQGAQKLLSAQSFHKMLPVDEFLPIMFNKHPNAAYMTHFEPRDLRAFSVEPLLIYPTHY
TGEPGYFSDTETSTIWDDEAVSTDWDRTHDPKTAQQGRIRPIAQNSVTGDTPPPAVRASR
DEL
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctgcgggagctctgaggctggctgcgctggtctcgctcttctcggtgtcgctg
ctgctctcctccgatgagtctccgctgctcaaacccaaagtcctgatcgccatcgtggcg
cggaacgctgcgcacagcctgccctactacctgggctgcatcgagaacctccagtacccc
aaggagaggatcgccatctgggcggcgacagatcacaatgtggacaacactacagctatg
ctgagagagtggctgaaggcggctcaatccagataccactatgtggagtggaggcccatg
gaggaaccacggtcgtacacagatgagtgggggccgaaacactggagtccgtccagattt
aaccacctgatgaagctcaggcaggctgctctgaaggcggcacgcgaacgctgggccgac
tacgtactgtttgcagacagtgataatctcctgactaacccgcgagtgttggacctgatg
atggcggagaatcggaccctggtggccccaatgatggagtcgcgctccctctactccaac
ttctggtgtggcatcactcctcagggctactataagcgaactccagattaccagccgatc
cgggagtggaagcgtttgggatgttttcctgttccgatggttcactccacctttctgctg
gatctccgacgctcctcctccaaatccctcgccttctaccccccccaccccgactacagc
tgggccttcgacgacatcatggtcttcgccttttctgcccgccaagcagatgtacagatg
tatgtgtgcaacaaggagcactatggcttcctgcctgttcctctgaaggcccatcagagt
gtgaaagatgaagaggagagtttcacacacaccatcactgaggcactgatcgatcacact
gttaaaccctcacagctgctgttcgtccctcccaaacccagagacatgatgggatttgat
gagatctttctcattaatctgaagaggaggacagaccggagggagaggatgttaaacaca
ctggatattttggggctggaggtcactgttactgaagctgtggacggcaaggctttgaac
tcttccaagttgcaggctctgggtattgagatgatgccggactataaggacccgtactct
ggacgcgttctgaccagaggagagattggctgcttcctcagccaccatgccacatggaca
gaggtggtggagaggggtctacagagtgtgctagtattggaggatgatgtcagatttgag
ccccggtttaagaagagactgcagaccatcatggaggacgtggagaaagctcagctggac
tgggaccttatctacgtgggccgtaagcggatgcaggtggcgcagccggaggtgtcggtg
gagggggtggataacctggtggtggcggattactcctactggactctaggctacgctctg
tctcaacaaggagcacagaaattactgtccgcacaatccttccacaagatgctgcctgtg
gacgagttcctgcccatcatgttcaacaaacacccaaatgctgcctacatgacgcacttc
gagccgagagatttacgggcgttctcggtggagccgctgctgatttaccccacgcactac
acgggtgagccgggctacttcagcgacacagagacctccaccatctgggacgacgaagcc
gtcagcacagactgggaccgaacacacgaccctaaaaccgcccagcagggccgaatacgc
cccatcgcccagaacagcgtcacgggggacacgccgcccccagcagtgcgagcatccaga
gatgaactgtga
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