Astyanax mexicanus (Mexican tetra): 103042909
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Entry
103042909 CDS
T05042
Symbol
socs5a
Name
(RefSeq) suppressor of cytokine signaling 5a
KO
K04698
suppressor of cytokine signaling 5
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103042909 (socs5a)
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
103042909 (socs5a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SOCS
SH2
SOCS_box
Motif
Other DBs
NCBI-GeneID:
103042909
NCBI-ProteinID:
XP_007231032
Ensembl:
ENSAMXG00000025122
UniProt:
A0A8T2LAP1
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Position
15:complement(39549316..39578778)
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AA seq
531 aa
AA seq
DB search
MEKVGKVWSNLKRGCQSLLHPDGGSRGEQVQQQTQQDTFCQSVDQPEREAQPPQSPASPS
SRSRSALPLVSRRVNGSAGRRHHNCVADVPQILEITVEQDTEDGRVPLGTRRDSYSRHAP
WSGKKRHSCSTKAQSSLETTERRSGRSRRRHGTSGISREELEPGAPRSLRQQFHDTMGLC
LPLRSSSRNAQVRPPKRKIQITELMLETCPFPPGSDLARKWHLIKQHTTPVASTAVDCST
EGPDAARGSPEDEEERLRERRRLSIEEGVDPPPDAQIHTVEAITAPLASIYKLGPKLAPG
MGETVGESRGATAADCDSEDDDSTTLCLQARRPKQRHVSTESHLGSKQAGLWKVHTQIDY
IHCLVPDLLQITALPCYWGVMDRYEAEALLDGRPEGTFLLRDSAQEDYLFSVSFRRYGRS
LHARIEQWNHNFSFDAHDPCVFHAATVTALLEHYKDPSACMFFEPLLTSPLHRTFPFGLQ
SLARATICRGTTYDGIAALPLPQALQDYLREYHYKQRVRVRWLEREPLKAK
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggtaggcaaggtgtggagcaacctgaagaggggatgtcagtctctgctccac
ccagatggaggttcccgtggggaacaagttcaacagcagactcagcaagatacattttgc
cagagtgtggaccagcccgagcgagaggcccagccaccacaatcaccagccagcccttcc
tctcgcagccggtcagctctccctctggtctcccggagggtcaatgggagcgctggaagg
cggcaccataactgtgtggctgatgttcctcagatattggagataacagtagagcaggac
acagaggatggacgtgtccctctgggtacccgcagagactcttattcgcgtcacgctccc
tggagtggcaagaagaggcactcgtgctccaccaaggcacaaagctccttggagaccacc
gaacgacgcagtggccgttctcgccgtaggcatggaacaagcggcattagcagggaagag
cttgaaccaggagcgccgcgctccctgcgccagcagttccatgacactatgggcctgtgc
ctacctctccgctcttcgtcgcgcaatgcccaggttcgaccacctaaacgcaagatacag
atcaccgagctcatgctggagacgtgccccttcccacctggctcagaccttgcccgcaaa
tggcaccttatcaaacaacatacaacgcctgttgcctccacagcagtggactgttctaca
gaaggtcctgatgccgctcgtggatctccggaggacgaggaagagcgcctgcgcgagcga
cgaagactcagtatagaagagggcgtggacccaccacctgatgcccagattcacacagta
gaggccattacagctcccctggcctccatctacaagctaggacctaaactggcccccggg
atgggggagaccgtcggcgagagccggggagccacggcggctgactgtgactccgaagac
gatgactctaccaccctttgcttgcaggctcgtcgacccaagcagcggcacgtctcaacg
gagagccacttgggcagtaagcaagcagggctgtggaaggtgcacacacagatcgactac
atccactgcctggtgcctgacctgctgcagatcacagcactgccgtgctactggggggtg
atggaccgctacgaggctgaggcgctgctggacggccggcctgagggcaccttcctactg
cgcgattcggcgcaagaagactacctgttttctgtaagcttccgtcgctacggccgctca
ctacacgcgcgcatcgagcagtggaatcacaacttcagcttcgacgcccacgacccctgc
gtgttccacgcggccacggtgacggcgttgttggagcactacaaagaccccagtgcctgc
atgttcttcgagcccctgctcacctcgcctcttcaccggacctttccattcggactgcag
agcctggccagggccaccatctgccgcgggaccacctacgacggcattgcggcgctgcct
ctgccgcaggcactgcaagactatctcagggagtatcactacaagcagagggtgcgagtg
cgctggctggagcgagagccgctcaaggctaagtga
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