KEGG   Astyanax mexicanus (Mexican tetra): 103042939
Entry
103042939         CDS       T05042                                 
Symbol
ccnt1
Name
(RefSeq) cyclin-T1 isoform X1
  KO
K15188  cyclin T
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    103042939 (ccnt1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:amex03021]
    103042939 (ccnt1)
Transcription machinery [BR:amex03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     103042939 (ccnt1)
    Brd4/P-TEFb complex
     103042939 (ccnt1)
    7SK RNP complex
     103042939 (ccnt1)
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N TFIIB
Other DBs
NCBI-GeneID: 103042939
NCBI-ProteinID: XP_022532800
LinkDB
Position
13:complement(1455336..1467636)
AA seq 696 aa
MAASFVSPLEEESRWYFTREQIENSPSRRAGLDPDKELSYRQQAANFIQDMGQRLNLSQL
SINTGIVYMHRFYMVQSFTLFHRNVIAPAALFLASKVEEQPRKLEHVIRVAHACLNPQDP
TLDSRSDTYVQQSQDLVALESIILQTLAFDITIDHPHSHVVKCTQLVRGVKLFPALKSDF
RASKDLAQTSYFMATNSLHLTTFCLQYSPTVVACVCIHLACKWSNWEIPVSTDGKHWWEY
VDSKVTLELLDELTHEFLQILEKTPNRLKRIRNWKAGGQTDKKPQVQEGSDKAETMMNMI
SMASSGSTLAGLMSLTAPPSDSSSSRDEQGATWQPAGKDLQQQSNHELQPTARVSLSLSE
YRAKHADELAAQKKKLEHMEASVKREYATAAQALLSQQRKEKHHHHQQQQQQQHSSSHHS
SSSSSDPNNPSPIVLKIPLDERQGHSSLKMRLHPSSGQSQGHSSRGSGQDIKVRIRVPDR
RGGGGSSEEGKSKEKHRERSNHHQHHHHHHHHSSSSGSISSSSSSAHKHSSSGSGSGSSK
KAQSSDSMRTSSSSSSSSSSSRKRPHASEPSASSHPSKISKSSRNSYHLPPLNMPLAHSA
DMLPALGLAHHQESYSHSKGDKADTNGHSVAGGNQSNEYQDTFDMLNSLLSAQGVQPTQP
PMFDYHSQYGEYRYGGGTQLPPLPSDPPPQLPPLPK
NT seq 2091 nt   +upstreamnt  +downstreamnt
atggcggcttcgttcgtgtctcctctggaggaagagagtagatggtattttacccgcgaa
cagatcgaaaacagcccgtcccgacgggcaggactcgaccccgacaaagagctgtcttac
cggcagcaggcggccaacttcatccaggacatggggcagcggctcaacctgtcccaactg
tcaatcaacactggcatcgtctacatgcatcgtttctacatggtccagtccttcacactc
tttcatcgtaatgtgatcgctccagctgcactctttttagcatccaaggtggaggaacag
cctcgtaagttggaacatgtaatcagggtggcccatgcatgtttaaatcctcaggaccct
actctggacagtaggagtgacacgtacgtgcaacaatcccaagacctggtcgctcttgag
agcataatactccagaccctcgcctttgatatcaccattgaccatcctcacagtcatgta
gtcaagtgcactcagcttgtgcgaggggtgaagttattcccagctctgaaatctgacttc
cgagcgagcaaggacttggcccagacgtcgtactttatggcgaccaacagtcttcacttg
acaacattctgcctacagtacagtccaacagttgttgcttgtgtgtgcattcatttggca
tgtaaatggtccaattgggaaatccctgtgtccactgatggcaagcactggtgggagtat
gttgactcaaaagtcacgctcgagcttctggatgagctcacacatgagtttctccagatc
ttggaaaagacccctaacagattaaaacgcatcagaaactggaaagcaggaggccagaca
gacaaaaagccccaggtccaggagggcagcgacaaggccgagaccatgatgaacatgatt
tctatggcgtcgtctggaagcacgttggccggcttaatgagcctcactgctcctccctcg
gactcctcctcttccagagacgagcagggcgccacctggcagcctgcaggtaaagatctg
cagcagcaaagcaaccacgaactacagccgaccgccagggtctccctgagcctgagcgaa
taccgcgccaagcacgccgacgagctggcggcgcagaaaaagaaactggagcacatggag
gccagcgtgaagcgagagtatgccacagcagcccaagccctgttgagccagcagcggaag
gagaagcaccatcaccaccagcagcagcagcagcagcagcattccagctcccaccactca
agctccagctcatcagacccaaataatccatcgcctatcgttctaaagatccccctcgac
gagcggcaaggtcacagctcattaaagatgcgcctacaccccagcagtggccaatcgcag
ggccacagcagccgagggtctgggcaggacattaaagtgcgcattcgtgttccagacagg
cgaggaggaggaggatcttcagaagaaggtaagagcaaagaaaaacacagggagcggtcc
aatcaccatcagcaccaccaccatcaccaccaccattcttctagtagcggctccatctcc
tcgtcatcctcctcggcacataaacactctagttctgggagcgggtctggaagtagcaaa
aaagcccagtcgagtgactccatgcgaacgagctcgtcttcttcctcgtcctcctcctcg
tccagaaagcgaccgcacgcctcagaaccgtcagcaagttcccacccttctaaaatcagc
aaatcctccagaaactcgtatcacctgcctcccctgaacatgcctctagctcacagtgcg
gacatgctgcccgctctcggactcgcgcaccatcaggagagctactcgcactccaaaggc
gacaaggccgacaccaacggccacagcgtcgccggcgggaaccagtccaacgagtaccag
gacacgttcgacatgctaaactcgctgttgagcgcacagggggtgcagcccacccagcca
cccatgtttgactaccactcccagtacggggagtacagatacgggggcggcacccagctt
ccgcccctcccgtccgacccccctccacagctgccgccgctgcctaaatga

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