Astyanax mexicanus (Mexican tetra): 103042948 Help Entry 103042948         CDS       T05042                                  Symbol col17a1a Name (RefSeq) collagen, type XVII, alpha 1a   KO K07603   collagen type XVII alpha Organism amex  Astyanax mexicanus (Mexican tetra) Pathway amex04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:amex00001]  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     103042948 (col17a1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen DUF8066 Motif Other DBs NCBI-GeneID:  103042948 NCBI-ProteinID:  XP_049325802 LinkDB All DBs Position 21:complement(23090595..23134769) Genome browser AA seq 1495 aa AA seqDB search MDNLIISKSVNAEGGLGASGKVTETLVTTTRLTSLPPKGNSSSVSSQRVVTSSSSSSSAA DSGASGGAVLVEKRIITQSSGGGGGSSSSGSTSYVISSSSVGSSSGSTVRVVSGGSGSSS SGSTLSSSGLSSSESSSSRVVGSSGATGGGSSSLSVVTVGGSSGGGSSGTFESRSSSSSS RLVTGSSAESAGMSGGSLSMSSSSAMMSGGGSSSLTVTKYSSSSSGGGMMKSGISSATYS PVLTERKSSVNMRAGGYEGGSSANSSPEYTRKEYISSSATTNAVTRGRTQTRESEIRARL QSASPSTRWTELDDVKKLLKGSRSSSSSPPRSPTNTLPIPKKRSVDTRTESHSGYDSTVI DPSYHGYGYHTNPNNLSPTSTLHHSMGQQNNMILGSSAMGSGFVTGGAVCGMHNNLVTSG GLTLTANGISSGPVYGVQKNIVAPGISATTAAAPSSPVTTDDVFGKDYRFMLIEKDNVAV KKETERLIKSKDSGKHFTSTTSTSGPGSFSDDSLKREKKMVSSTIESTTVSSGGKAAVKD KATYAEIRKEESGSTKLGFCSCCTWWMWLLGLLLGLLFMLGLLFGLIALAQEVKALKARV DALEGGPDRVSSAHTSRLSSSVNIVDPLDSSYASVARSENTINLGSDPSQTDPAALQRAI KQLVQSELQSDTVRATLATSLRGERGEPGQKGDPGAPGVKGDAGFPGLPGPPGPPGHAGQ EGPRGPKGSAGEPGHDGPPGQRGREGPTGPRGEPGPPGAGEKGDKGSPGDPGAPGPAGPP GLMGPRGEVGSPGSAGIPGAPGPQGFRGDAGDPGPKGERGPAGPPGAKGDQGEKGPRGAT GEPGQIGPAGPPGEKGPKGSAGSPGPDGEKGSRGDQGAVGLPGARGPAGAPGDAGTPGSP GLPGPPGLPGTPGQPGAKGEPGEPGRVISAGSASNTVAIPGPPGPPGSPGPAGPPGLSGP IGPAGLPGTPGPKGDRGDKGDDGEPGVSVKTVETNKSEKPVAGPPGPPGPPGPAGPPGEP GKPGEGKEGPPGPPGKPGVGQPGPPGDKGEPGSFVPNSETFFAGPPGPAGPPGPPGDPGH PGLPGEPGVGSPGQRGPEGPPGPQGPMGPEGPKGDAGVPGAPGIPGYSYGGGRSSPGAPG PPGPPGPPGPPGDGSSSPNQQLSDLLRNDGIRQYLAGPPGPPGPPGSVSDADLADRVINY IQREEVRRYLVGPPGPPGAPGLPGGYALNPQEVAGRVLNLMNEQGILRQSGPPGPPGPPG LPGPTYSDLSLLLQNSEYRGLLGPAGPPGPPGPAGFPGPPGPPGPVPYTGTFSLEEIQRY MEIAGFKGPPGPPGPPGPQGPPGIARGLVSYAENAQQDPLRAELQQYLKNEPLDYPSIAA EVVNYLKSHGLMLRDVANEDAHRSQEPFRPYSNMTEIINFIRDHGLVGPPGRPGQKGEMG YPGPKGPRGPRGERGLPGLPGFPGNDGPQGPKGERGDAAYMSLKRKRRSRGFKSN NT seq 4488 nt NT seq  +upstreamnt  +downstreamnt atggacaatttaatcatatccaagagtgtgaacgcagaggggggattgggagcctcaggc aaagtcacagagacactagtgactaccaccagattaacgtcccttccaccaaagggtaac agtagttcagtgagctctcagcgggtggtgacctccagctcaagctctagctctgctgct gactctggagcttctggaggagcagtgctggtggagaagaggatcatcacccagagcagc ggaggaggaggaggaagcagcagcagtggcagcactagttatgtcatatcctcctcttca gtaggtagctcaagcggcagcacagtccgagtcgtgagtggtggatctggcagcagctct tctggaagtacattgtcctcttctggtttatcttcgtctgaatcttcctcaagccgagtc gttggaagttctggagctacaggaggaggttcttccagcctctctgttgttacagttgga ggttcctcaggaggaggttcctctggtacttttgagtcccgttcctcctcctcttcatca cgtttggtaactggctcctctgctgagtcggctggcatgtccggcggttccctttccatg tcctcctcttcagccatgatgtcaggagggggctccagctctctgacggtgaccaagtac agctcctcatcctcaggtggtggaatgatgaagagcggcatctcatctgctacctactca cccgttcttacagagaggaagagcagcgtgaacatgcgtgctggaggatacgagggaggc tccagtgcaaattcatcccctgaatacaccaggaaagagtacatttcatcttcagcaact acaaatgcagtcaccagagggcgcacccagaccagagaaagtgagatcagagccagactg cagagcgcctctccctccaccagatggactgagttggatgatgtgaagaagctgctgaaa ggcagccgctccagcagcagtagtcctcctcgatctcccaccaacactctccccatcccc aagaagcgcagtgtggacactcgtactgagagccactcaggttacgacagtactgttata gatccttcataccatggatatggctaccacaccaaccccaacaaccttagcccaaccagc actctacatcacagcatgggacagcagaacaacatgatcctgggatcctctgctatgggc agtggttttgtcactggtggtgcagtgtgtggaatgcataacaacctggttaccagtggc ggtctgaccctcactgcaaatggaatcagttctggtccagtatatggtgttcagaagaat attgtggcccctggaatatcagccacaactgcagctgctcccagcagtcctgtcactact gatgacgtgtttgggaaagactatcggttcatgctgattgagaaagacaacgttgcagta aagaaagagactgagaggctgatcaagtcaaaagactcaggcaaacacttcacctctacc acctccaccagtggaccaggctcgttttcagatgattcgctgaagcgagaaaagaagatg gtctccagcaccattgaaagcaccactgtgtcgagcggtggcaaagctgcagtgaaagac aaagccacatatgcagagattcgtaaagaggaatcagggtcgaccaaactagggttctgt tcttgttgtacgtggtggatgtggctgctgggattgttgctggggctgctcttcatgctg ggccttctgtttgggctcatcgctctggcccaggaagtgaaggctctgaaggctcgagta gatgctctggaaggtggaccggatcgcgtatcctcggcccacaccagccgtttatcatcc tctgtgaacattgtggaccctctggactcctcatatgcgtcagtggcacgctctgaaaac actataaacctggggtctgacccatcacagactgaccctgcggccttgcagagagcaatt aaacagctggtccagtcagagctccagtcagacactgtcagagctacactggcaacttca ctcagaggagaaagaggagagcctggacagaagggtgaccctggagccccaggagttaaa ggtgatgcaggatttcctggactgccaggtcctcctggccctcctggtcatgcaggacaa gaaggccccagaggacctaaaggaagtgcaggtgagccaggccatgatggtccaccagga cagaggggtcgtgaagggccaacaggccctagaggagaaccaggccctccaggagctgga gagaaaggagataaagggtctcctggagatcctggagcacctggacctgcaggaccacct gggcttatgggacccagaggtgaagtgggttccccaggtagtgcaggaattccaggagct cctggtcctcaaggattccgtggagatgctggagatcctggaccaaaaggagagagaggt cctgcagggcctcctggagctaaaggtgatcaaggagagaaaggaccccgtggtgctact ggagagccaggacagattggacccgcaggaccacctggagagaaaggacctaaaggatca gcaggttcccctgggccagatggtgagaaaggctcaagaggcgatcagggggcagttggg ttgccaggtgcacgtggcccagctggggctcctggagatgcaggaacaccagggtctcca gggcttccaggaccaccaggtttgccaggaacaccgggtcagcctggagctaaaggtgaa ccgggtgaacctggaagggttatcagtgcaggctctgcttccaacactgtggccattcct gggcctcctggacctcctgggtctccaggccctgccggaccacccggactgtctggtccc atcggccctgcaggccttcctggaacaccagggccaaagggtgacaggggcgacaaagga gatgatggagagcctggtgtctcggtcaaaactgttgaaacaaacaaatctgagaagcct gtcgctggtccccctggaccccctggaccacctggacccgcaggacctcctggagaacca ggaaaaccaggtgaaggaaaagaaggcccaccaggacctcctggaaaaccaggtgttggt cagcctggtccacctggtgataaaggtgaaccaggaagctttgtgcccaactcagaaact ttctttgcaggaccaccaggacccgctggacctcctggacctccaggagatccaggccat cctggattaccaggagaacctggagtgggatccccaggacaaaggggtccagaaggtcca ccaggcccacaaggacccatgggaccagaaggtccaaaaggtgatgctggtgttccagga gcccctggcatcccaggatattcttatggtggaggcagaagttcacctggagcaccaggt ccacctgggcctcctggacctccaggacctccaggtgatggctccagctcaccaaatcag cagctttctgacctcctcagaaatgatggtattaggcagtacttggctggtcctcctggg cctcctggaccaccgggaagtgtctctgatgctgacttggctgaccgtgttatcaattac atccagagggaggaggtgaggcggtatctagttggacccccaggaccccctggagctcca ggtctaccaggaggttatgcactaaaccctcaggaagtggctggaagagttcttaatctg atgaatgagcagggtatccttagacagtctggacccccaggcccacccggccctcctgga cttcccggaccaacttacagtgatctctctcttcttctgcaaaactcagagtacagaggt cttctgggacctgcagggcccccaggtcctccaggccctgctggcttcccaggacctcct ggacccccaggcccagttccttatactggcactttcagtttggaagaaatccaaagatac atggaaattgctggctttaaaggaccacctggacctcctggacccccagggccacaagga cctcctggcattgcgagagggctggtgtcctatgctgaaaacgcacagcaagaccctctc cgagctgaactacagcagtatctgaagaatgaacctctggactaccccagtattgcagca gaagtggtgaactacctcaaatctcatggtttgatgttgagggatgtggctaatgaagat gcccaccgttcccaggagccattcagaccctacagcaacatgactgagatcattaacttc attagagaccacggccttgttggaccaccaggtcgacccggccagaaaggagagatggga tatcctggtcccaaaggaccaagaggtcctagaggagagcgaggcctccctggtctacca ggctttcccggcaatgatggacctcaaggaccaaaaggagaaagaggagatgctgcctac atgagcctcaaaagaaagagaagaagccgggggtttaagagtaattaa

DBGET integrated database retrieval system