Astyanax mexicanus (Mexican tetra): 103042959
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Entry
103042959 CDS
T05042
Symbol
alcamb
Name
(RefSeq) activated leukocyte cell adhesion molecule b isoform X1
KO
K06547
activated leukocyte cell adhesion molecule
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
103042959 (alcamb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
amex04515
]
103042959 (alcamb)
04090 CD molecules [BR:
amex04090
]
103042959 (alcamb)
Cell adhesion molecules [BR:
amex04515
]
Immunoglobulin superfamily
Other
103042959 (alcamb)
CD molecules [BR:
amex04090
]
Proteins
103042959 (alcamb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
C2-set_2
I-set
ig
V-set
C1-set
Ig_4
Ig_PDGFR_d4
TM_ErbB1
S_layer_C
DUF3377
Psb35
DUF6377
Syndecan
TNFR_16_TM
Motif
Other DBs
NCBI-GeneID:
103042959
NCBI-ProteinID:
XP_007260593
Ensembl:
ENSAMXG00000002938
UniProt:
A0A8B9JNC4
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All DBs
Position
18:5539923..5568179
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AA seq
564 aa
AA seq
DB search
MRFLGFSETALLIISLLETVRGLPTFVGKYGETIDVPCGEGKDKPEKLFLTKWKYTKADG
STGDLLKLSDKNLAIIPDVDYTGRVNLTQDLSLRITQTRLSDQKMYTCMLVAGEDILEYP
VQVRILKTPSAPTITNQAKEMEIGKPTLLGECSTKDANPAANITWLKNNVPLMSDEKAIK
ITTTVQTDKTTGLASTSSKLEYTAVKEDLNAKFACAVKHSSLTADLVSTPVDFVINYPTE
KVSLQVVAADAIKEGDNVTLKCKADGNPPPSSYSFHIKGKKVKVENSDSHTLTNVTRANT
GEYKCSLVDNDAMAASVNITVMYLDITSITKGKVVKQLDESFEPTLFVNASGEPKVTWSK
NNISLNSPPKFDKLKYSDSGVYECVVSMPGLFRKASFELIIQGAPVINKLSKKLSNNGNF
KVLSCEAEGSPKPTVQWSINGTNATETPYVGGRVTHRITIIPTVNLTVNCTVSNELGQAS
KSLDVSTLFEEVTVDKRAEDSNDQTRVAVGVVIGVILAAVAIGLIYWIYMKRTRQGTWKT
GEKEDGTTEESKKLEENQSQKAEV
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttctggggttttctgagactgctctgctcatcatatccctgctggagacagta
agaggacttccaacctttgtcggaaagtatggagagaccattgacgtgccttgcggcgaa
gggaaggacaagccagaaaaactctttttaaccaaatggaaatataccaaagcggacggc
agcactggtgacctcctaaaactttcagataaaaatcttgcaattatccctgatgtggat
tacacagggagagtgaacctcacacaggacctaagcctgcgcattacccaaaccaggctg
tccgatcagaagatgtacacctgtatgttggttgcgggtgaagacatacttgagtaccct
gttcaagtgagaattctgaagaccccctctgcacccacaatcaccaatcaagctaaagaa
atggaaattggaaagccaacactgcttggagagtgttctaccaaagacgccaatccagca
gctaacatcacatggctaaagaacaacgtgccgctcatgtctgatgagaaagctataaag
atcaccacgactgtgcagacagacaaaacaaccggccttgcatctacatcctctaaactt
gagtacacagctgtgaaggaagacctgaatgctaagtttgcgtgtgctgtgaaacatagc
agcttgacagcagatttagtgtccactcctgtagacttcgtcattaactaccccactgag
aaggtcagtctccaggtcgttgctgcagacgcgatcaaggagggagacaatgtgaccctg
aaatgtaaagctgatgggaatccaccaccctccagctacagcttccacatcaaggggaag
aaggtgaaagtggagaactcagacagtcacactctgaccaacgtcacacgagccaatact
ggagagtacaagtgctccctagtggataacgatgcaatggcagcctctgtgaatatcaca
gttatgtatttggacatcaccagcatcacaaaaggaaaagttgttaaacagttagatgag
agctttgagccaacactttttgtgaacgcatccggagagccaaaagtcacctggtcaaag
aacaacatcagcctgaattcacctcctaagtttgacaagctgaagtactcagactctggg
gtttacgaatgtgttgtttccatgcctggactcttcagaaaagcctcgtttgaactgatt
atacagggtgccccagtgatcaacaagctgtctaagaaactcagtaacaacggcaatttc
aaagtcctgagctgtgaggctgaaggatcacccaaacctacagtccagtggagcatcaat
ggcactaatgctactgagactccttacgtgggagggagggtcacgcacagaatcaccatc
attccaacagtcaatctcacagttaactgcactgtttctaatgaactgggccaggcttca
aagagccttgatgtgtcaactctatttgaggaggtgacagtggacaagcgagcagaagat
tcaaatgaccagactcgagtggcagtgggggtcgtcataggtgtgattctggcagctgtg
gctattggcctgatttattggatatacatgaagagaaccaggcaaggtacctggaaaact
ggagaaaaagaggatggcacaacggaggaaagcaaaaagctggaggagaatcagagtcaa
aaagcagaggtgtaa
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