KEGG   Astyanax mexicanus (Mexican tetra): 103042988
Entry
103042988         CDS       T05042                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
  KO
K12842  U2-associated protein SR140
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103042988
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:amex03041]
    103042988
Spliceosome [BR:amex03041]
 Complex A
  U2 snRNP components
   U2 related factors
    103042988
 Complex B
    103042988
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 RRM_7 DUF2299 SET_assoc
Other DBs
NCBI-GeneID: 103042988
NCBI-ProteinID: XP_022523427
Ensembl: ENSAMXG00000006189
LinkDB
Position
18:41500245..41519997
AA seq 977 aa
MADRTPGGAHKANSKALLESKLKAFSIGKMAVAKRTLSKKEQDELKKKEDEKAAAEIYEE
FLAAFEGGEGRVKTFVRGGIANATKEEAAVDEKKGKLYKPKSRVLEAKSFLPLETPPQFL
AIDKRNASKKGEKEKKKSNLELFKEELKQIQEERDERHRLKGRVSRFEPLSAMEGRRSSD
GSSRRNRPSSVLDDSAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIM
WPRTDEERARERNCGFVAFMTRRDAERALKHLNGKMIMNFEMKLGWGKGVPIPPHPIYIP
PSMMEHTLPPPPSGLPFNAQPKERLKNTNAPMPPPPKSKEEFEKTLSQAIVKVVIPTERN
LLSLIHRMIEFVVREGPMFEAMIMNREISNPLYRFLFENQSPAHVYYRWKLYSILQGDSP
TKWKTEDFRLFKNGSLWRPPPLNPYLHGTPEEEEGEEEEEEDEEGSKKGSLKDEERDKLE
ETLRGLTPRRGDIAEAMLFCLTHADAAEEIVECITESLSILKTPLPKKIARLYLVSDVLY
NSSAKVSNASYYRKFFETKLCQIFSDLNATFRTIQGHLQSEHFKQRVMSCFRAWEDWAVY
PDPFLIKLQNIFLGLVSLDPEKETPVEVPMPEEPPPTEDIDGAPIVEEELDGAPLEDVDG
MPIDGAPLDGAPLDDLDGVPIKGAEDELDGVPFDGPKPTFKMAPSKWEEVDGSALEAQAV
TTSKWEVVDMPEESEKSEERKTHETAVKESSSKSLYASEQPFHSQPVKEEYHESKSSKLS
EMSEEKRAKLREIELKVMKFQDELESGKRPKKSGQSIQEQVELYRDKLLQREKEKEVEKD
KEKEKEKKEKEKSEVSHKEKEKEKEKEESSSSRKEKKRRHSPSPSPTRSSSSRRGRSPSP
RSERSDRSYTKDSSRTSYKDSPRESSRKTSKRSPSPPATPKRSRRSRSRTPKKSSKKSRS
RSRSPHRSHKKSKKSKH
NT seq 2934 nt   +upstreamnt  +downstreamnt
atggcggacaggacgccaggcggggctcacaaggccaactccaaggctttgttggagagt
aagctgaaagccttcagtattggaaagatggctgtggctaaaagaaccttgagcaaaaag
gaacaagatgaattaaagaaaaaggaggatgaaaaagcagctgctgaaatctatgaagag
ttcctcgctgcgtttgaaggaggtgaaggcagagtaaagacctttgtcagagggggcatc
gccaatgccaccaaagaggaagctgcagtggatgagaagaaaggaaagctctacaaaccc
aaatcacgtgttttggaggcaaaaagttttttgccgcttgaaacaccaccacagtttctt
gcgatagacaagcgtaatgcatcaaagaaaggagaaaaagaaaagaaaaagagcaacctg
gagctttttaaagaagagctgaaacagatccaggaggagcgggatgagcggcacaggctg
aagggacgagtcagtagatttgaacctctgtctgctatggagggaagaagatcctcggat
ggttcttcacgaagaaaccgtccgtccagtgttttggacgactccgctccaggctcacac
gatgttggagacccatccaccacaaacctttacctgggaaatataaatcctcagatgaat
gaggagatgctgtgtcaggaattcggccgctacggtcctctggccagcgtgaagatcatg
tggcccaggactgacgaggagagagccagggagaggaactgtggttttgtggcctttatg
actagaagagatgctgaacgagcgctcaaacacttaaatggaaaaatgataatgaacttt
gaaatgaaactgggatggggcaaaggcgtgccaatcccacctcacccaatttacattcct
ccctccatgatggaacacaccctgcccccaccgccctccggcctgcccttcaacgctcag
cccaaagagaggctgaagaacaccaacgcccccatgcctcctccacccaagagcaaagag
gagttcgagaagactctgtcgcaagccatagtcaaagtggttatcccaacagaaaggaat
ttgctctctctcatccaccgaatgatcgagtttgtggtgcgtgagggacccatgtttgag
gccatgatcatgaaccgagagatcagcaatcctttatacaggtttttatttgaaaatcaa
agcccagctcatgtgtattaccggtggaagctgtattctatactgcagggagattcccca
accaaatggaaaacagaagactttaggttgtttaaaaatggctccttatggcggccgcct
cctctgaacccgtaccttcatggcactcctgaggaagaggagggtgaggaggaggaggag
gaggacgaagaaggcagcaagaaaggctctctgaaggacgaagagagagataagctggag
gagactcttcgagggctcaccccgaggaggggcgatattgcagaagccatgctgttctgt
ctcacacacgccgatgctgctgaagaaatcgtggagtgtatcacagagtctctgtccatc
cttaaaacaccgctgcccaagaagattgcgaggttatatttggtgtcagatgttctgtat
aactcttcagctaaagtctcgaatgcctcctactacaggaaattctttgaaacaaagctc
tgccagatattctctgatcttaacgccaccttcaggacgatacagggtcacttacagtca
gagcattttaagcaacgggtcatgtcgtgtttccgggcgtgggaggactgggcggtttat
cccgatccattcctcatcaaactccagaacattttcctgggactggtcagtctggatccg
gagaaagagacccccgtcgaggtgccaatgcccgaggagccgccaccgacagaggatata
gatggtgccccgattgtggaggaggagctggacggcgctcctctggaggatgttgacggc
atgcctattgatggagctcctctggatggagctccgctggacgacctggatggagttcct
ataaagggggcagaggatgaactggatggagttcccttcgatggaccaaagccaaccttt
aagatggctccatctaaatgggaggaggtggacggatctgcactggaagcacaagctgta
accacatcaaagtgggaggtagttgatatgccagaagagtcagaaaagagtgaggagagg
aaaacacacgaaaccgctgtaaaagaatcttcgtcgaagagtttgtacgcctcagagcag
ccgtttcactcgcagcctgttaaagaagaatatcatgaatccaaatccagcaagctgtcg
gagatgagtgaggagaagcgagctaaactgcgggaaatcgagctgaaagtgatgaagttt
caggacgagctggagtctggaaaacggccgaagaaatcgggacagagtattcaagagcag
gtggagctctacagggacaagttactacagagggaaaaggaaaaggaggtggagaaagat
aaagagaaggagaaagaaaagaaggagaaagagaaatctgaagtgtcgcacaaagagaag
gagaaggagaaggagaaggaggaatcttcatcaagcagaaaagagaagaagcgcaggcac
agtccctcccccagtcccacccgcagtagctccagccggcgtggccggtccccctcccca
cggtccgagcgctcagacagatcctacaccaaggacagctcacgcacctcctacaaagac
tcgccacgggaaagcagccggaaaacctccaaaaggtcgccttccccacccgctacaccc
aaacggtcccgcagatccagatcaagaacgcccaaaaaatcctccaagaagtccaggtcc
cgctcgcgatcgccacaccgctctcacaaaaaatccaagaagagcaagcactga

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