Astyanax mexicanus (Mexican tetra): 103042992
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Entry
103042992 CDS
T05042
Symbol
gtf2f2a
Name
(RefSeq) general transcription factor IIF subunit 2 isoform X1
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103042992 (gtf2f2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amex03021
]
103042992 (gtf2f2a)
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
103042992 (gtf2f2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
Serglycin
LYRM_2
Motif
Other DBs
NCBI-GeneID:
103042992
NCBI-ProteinID:
XP_007246734
Ensembl:
ENSAMXG00000024494
UniProt:
A0A8B9RG17
W5LQY4
LinkDB
All DBs
Position
21:30621702..30635961
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AA seq
265 aa
AA seq
DB search
MSDRGDVDLTGAKQNTGVWLVKVPKYLSQQWAKASGRGEVGKLRIGKNQGKAEVSFTLNE
ELTTIDSTSEKASLVRAPREHPFTMQTVGGQTLAVFTENSSGQSDAEGSSSGTGSGPDKI
ALEGVVVQRAECRPAASENYMKLKKLQIEESLKPHRFSQQLDKAVTTNYKPVANHAYNLD
YEKKKKEEGKRARADKQQVLDMLFSAFEKHQFYNIKDLVDITKQPVIYLKEILRDIGIYN
VKGTHKNTWELKPEYRHYQSEEKSD
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagaggcgatgtggatttaaccggggccaaacagaacaccggagtctggctg
gttaaagtacccaaatatttgtcccagcaatgggccaaagcatcaggaagaggagaagtg
ggaaaactgcgaattggaaagaatcaagggaaagcagaggtgtccttcacattaaatgag
gagttgaccacgatagacagcactagtgagaaggcgtctttggtgcgcgccccccgggaa
caccccttcaccatgcagaccgtgggaggccagactctggccgtgttcactgaaaactcc
tcaggccagtcagacgctgagggcagcagctcaggtactggttcaggcccagacaaaata
gcactggagggagtggtggtgcagcgagccgagtgcagaccagccgccagtgaaaactac
atgaagttaaaaaagctacagattgaggagtcattgaagccccacagattctcccagcag
cttgacaaggcggtcaccaccaactataagcctgttgccaaccacgcgtataacttggat
tacgagaagaagaagaaggaagaggggaaaagagcgcgagcagacaagcagcaggtgctg
gacatgctcttctccgcctttgagaagcatcagttttacaacatcaaagacctggtggac
atcaccaaacagcctgtgatctatctgaaggagatcctgcgtgacatcgggatctacaac
gtgaagggaacccataagaacacctgggagctgaagccggagtacaggcattaccagagc
gaggagaagagcgactga
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integrated database retrieval system
