KEGG   Astyanax mexicanus (Mexican tetra): 103043088
Entry
103043088         CDS       T05042                                 
Symbol
pals1a
Name
(RefSeq) protein PALS1
  KO
K06091  MAGUK p55 subfamily member 5
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04530  Tight junction
Brite
KEGG Orthology (KO) [BR:amex00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    103043088 (pals1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:amex04990]
    103043088 (pals1a)
Domain-containing proteins not elsewhere classified [BR:amex04990]
 PDZ domain-containing proteins
  MAGUK family proteins
   103043088 (pals1a)
SSDB
Motif
Pfam: Guanylate_kin L27_N PDZ SH3_2 PDZ_6 L27 SH3_1 PDZ_2 MMR_HSR1 CSN4_RPN5_eIF3a SH3_9 ZNHIT3_C
Other DBs
NCBI-GeneID: 103043088
NCBI-ProteinID: XP_007244724
Ensembl: ENSAMXG00000011726
UniProt: A0A8B9JZD6
LinkDB
Position
14:29482047..29524274
AA seq 713 aa
MQKSALLSFTAPTYASSRTLPYAYTGGSVGMMTTSHMNGHVNDSEDRRDGGGGVSEGLDE
PLQWHREMAVDCPGDLGARTLPVRRSAQLERIRQQQEDRRRREEEGRTRQELDLNASMRL
KKLAQNPKVGIDNPTFEPIEGSWGTLGQLQGFSGAPKLLELEELLMSLKQVQYCLGDAQS
QEDVELVLQLVQKSDFQKAFNIHNAVALHMNRPSPPFPLTDRAQSLAHEVQTMLHNSSQK
EGLELNTLLRSPHVQALMLAHDSVAEQEMQPEPLSPLDGPCETLTQWGGETVKIVRIEKA
KDIPLGATVRNDMDSVIISRIVKGGAAERSGLLHEGDEVLEINGVEIRGKDVNEVFDILA
EMHGTLTFILIPSQQTKPPPIKETVVHVKAHFDYDPSDDPYVPCRELGLCFQKGDILHII
SQDDPNWWQAYRDGDEDNQPLAGLVPGKSFQQQREAMKQTIEEDKEPEKSGKLWCAKKNK
KKRKKLLYNANKNDDYDNEEILTYEEMALYHQPANRKRPIALIGPPNCGQNELRQRLLSN
DPDRFGGAVPHTTRSRRDGEVNGRDYHFVSRQAFEVDAAAGKFIESGEFEKNLYGTSTDS
VRQLINSGKICLLCLHTQSLKVLRSSDLKPYIIFIAPPSQERLRALLAKDNKNPKPEELR
DIIEKAREMEQNFGHLFDAAIVNTDQEKAYQELVRLIDKLDTEPQWVPSSWLR
NT seq 2142 nt   +upstreamnt  +downstreamnt
atgcagaagtcagccctcctaagcttcacggcccccacgtacgcatcctctcgcaccctg
ccctacgcctacacaggaggcagcgtcgggatgatgaccacttcccacatgaacggccac
gtgaacgactcggaggaccggcgggacggaggcggaggcgtgagcgagggcctggacgaa
cccctgcagtggcacagggagatggctgtggactgtccgggtgatctgggcgcccgcact
ctgcccgtccgtcgcagcgcccagttagaacgcatccgccagcaacaggaggaccgcagg
aggagggaggaggagggtcgcacccggcaggaactggacctgaacgcctccatgcgccta
aagaagctcgcacagaaccctaaggtgggcattgataaccccacctttgagcccattgag
ggttcctgggggactctggggcagctgcagggtttcagcggagctccaaaactgctggag
ctggaggagctgctgatgtctctgaagcaggttcagtactgtctaggagatgcccagagt
caagaggacgtggagctggtcctgcagctggtgcagaagtcggacttccagaaggccttc
aacatccacaacgctgtggctctgcacatgaaccggccaagtcctcctttccccctcaca
gatcgagcccagagccttgcacacgaggtccagaccatgctgcacaacagttcacagaag
gagggactggaactcaacacactgctgaggagccctcatgtgcaggctttaatgcttgcc
cacgacagtgtggcagagcaggagatgcagccagagcccctcagtcctctcgatggccca
tgcgagaccctcacacagtgggggggtgagacggttaagattgtacgcatagagaaagct
aaggacatcccactgggagccaccgtgaggaacgacatggacagcgtgatcatcagccgg
atcgtgaaggggggtgcagcggagcgcagtgggctgcttcacgaaggggacgaggttttg
gagattaacggagtggagatccgtgggaaagatgtcaatgaagtgtttgatatcctggcg
gagatgcacggcacgctgacgtttattctgattccgagccaacagacaaagccccctccc
attaaagagactgtggtccatgtaaaggcacattttgactatgacccttctgatgaccca
tacgtaccgtgccgtgagttgggactttgcttccaaaaaggggacattctccacatcatc
agtcaggacgaccccaactggtggcaggcttatagagacggagacgaggataaccagcct
ctggctggcctggtaccaggcaagagcttccagcagcaaagagaagccatgaaacaaaca
atagaggaagataaggagcctgaaaaatcaggaaagctgtggtgcgcaaaaaagaacaaa
aagaagcggaagaagctgctatataatgcaaacaaaaatgatgattatgacaacgaggag
attcttacctatgaagagatggccctgtatcaccagcctgccaataggaagcgtccaatt
gctctgattgggcctccaaactgtggacaaaatgaactgaggcaaagacttctgtctaat
gaccctgatcggtttggaggcgctgttcctcacaccacgaggagccgaagagacggagag
gtgaacggccgcgactaccactttgtgtctcgtcaggcgtttgaggtggacgccgctgca
gggaaattcatagagtctggagagtttgagaagaacctttacggcaccagcacggactca
gtgcggcagctcatcaacagcggcaagatctgcctcttgtgtttgcacactcagtccctg
aaggttctgcgaagctcggacctcaaaccctacatcatcttcatcgcaccgccctcccag
gaacgactgcgtgctctcctagctaaagacaacaagaacccaaagccagaggagctgagg
gacatcatcgagaaagccagagagatggagcagaactttggccacttgtttgatgctgcc
atagtgaacactgaccaggagaaggcttatcaggaacttgtgcgcctcatcgataagctg
gacaccgagcctcagtgggttccttcgtcctggctacgctga

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