Astyanax mexicanus (Mexican tetra): 103043090
Help
Entry
103043090 CDS
T05042
Symbol
tnpo3
Name
(RefSeq) transportin-3 isoform X2
KO
K15436
transportin-3
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03013
Nucleocytoplasmic transport
amex03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103043090 (tnpo3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103043090 (tnpo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amex03016
]
103043090 (tnpo3)
Transfer RNA biogenesis [BR:
amex03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
103043090 (tnpo3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
Importin_rep_3
Motif
Other DBs
NCBI-GeneID:
103043090
NCBI-ProteinID:
XP_007245074
Ensembl:
ENSAMXG00000016236
UniProt:
A0A8B9K0K4
LinkDB
All DBs
Position
2:35436211..35457542
Genome browser
AA seq
923 aa
AA seq
DB search
MDGGKPSLAMVYQAVQALYHDPDPSGKERASVWLGELQRSMHAWEISDQLLQLKQDVESC
YFAAQTMKMKIQTSFYELPQETHLALRDSLLSHIQNLKDLSPIIVTQLALAIADLALQMA
SWKGCVHTLIEKYSNDVTSMPFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSTTV
ITLLLSCVEKSGSDEKMLIKVFRCLGSWFNLGVLDSNFMASNQLLMVLFQVLQRDETSTN
LHEAASDCVCSALYAIENVDTHVALAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFT
ELCETFLEITVRSPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTNDPA
LHGVFRPYIQRLLHSLARHCQLDPDHEGIPEDTDDFGEFRMRVSDLVKDVIFLVGSMECF
SQLYSTLKDGNPPWEVTEAVLFIMAAIAKSVDPENNPTLTEVLEQVVLLPQTVHVAVRYT
SIELVGEMSEVVDRNPRFLNPVLSYLMKGLREKPLASVAAKAIHNICSVCRDHMAHHFQG
LLEIARSLDSFALSTEAAIGLLKGTALVLARLPLEKIAECLSDLCSVQVLALKKLLGQDS
SNGKSADPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNTHQADNRIVE
RCCRCLRFAVRCVGKGSASLLQPLVTQMVNVYQVYPHSCFLYLGSILVDEYGMEEGCRQG
LLDMLQALCMPTFQLLEQPNGLRNHPDTVDDLFRLATRFVQRSPVTLLGSNIIVHIIQCA
IAATTLDHRDANCSVMKFVRDLIHTGVSNDHEDDFELRKRLIGQAMEQHGQQLVTQLIHT
CCFCLPSYTLPDVAEVLWEIMVFDRPTFCRWLEAALKGLPKEMSGGAVTVTHKQLTDFHK
QVTSAEECKQVCWAVREFTRLYR
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggacgggggcaagccgagcctggcgatggtctatcaggccgttcaggcgctctaccac
gacccggacccatccggcaaggagcgggcctcggtgtggctcggggagctgcagagatcg
atgcacgcgtgggagatatcagaccagctcctgcagctgaagcaggatgtggagtcctgt
tactttgcagcccagactatgaagatgaaaatccagacgtcattctatgagcttccacag
gagacgcacctcgccctgcgcgactcgctgctctctcatatccagaacctcaaagacctc
tcgcctatcattgtcacacagcttgctctggcaattgctgatcttgcccttcagatggcc
tcatggaagggctgtgtccacaccctcatagaaaaatacagtaacgatgtgacctcgatg
cctttcctgattgagatcctcacagttctgccagaggaggtgcacagccgctctttaaga
atcggtgcaaaccggcggacagaaatcatagaagatctggcttactactccaccactgtg
atcacactgcttctgtcatgtgtggagaagtctgggagtgatgagaagatgcttattaaa
gtgttccgttgcctgggcagttggtttaacctgggcgtgctcgacagcaactttatggcg
agtaaccagttgctgatggtgctcttccaagtgctgcaaagggatgagacctcaactaac
ctacacgaggcagcatccgactgtgtttgttcagcactctatgccattgagaacgtagac
acacacgtggctctggctatgcagctcttccagggagtactgaccctagaaacagcctac
cacatggctgtggctcgagaagatctcgacaaagtattaaactactgcaggatcttcact
gagttatgtgagacgtttctggaaattactgtgagaagccctgggcaaggcatgggagac
ctgcgcaccttggagctgctgctcatttgtgcaggacacccccaatatgaggtggtggag
atctcctttaacttctggtaccgtctcggggagcacctgtataaaaccaatgatccagcg
ctgcatggtgtcttcaggccctatatccagaggctgctgcacagcctggcacgccactgc
cagctggacccagatcatgaaggaattcctgaagacactgatgactttggagagttcagg
atgagggtgtctgatcttgttaaggatgttattttccttgtgggctccatggaatgtttc
tcacagctttactctactcttaaagatggtaacccaccctgggaagtgactgaagcggtg
ctctttatcatggctgcgattgcaaaaagtgttgatcctgagaataaccccacacttaca
gaggtgctagagcaggtggtgcttctgcctcagacggtgcatgttgctgtgcgctacacc
agcatcgaactggtgggagagatgagcgaggtggttgaccggaatccacgctttctgaat
cctgtgctgagctatctgatgaaagggctgcgggaaaagccgctggcctctgtagcggcc
aaggccatccacaacatctgctcagtgtgtagagaccacatggcacatcatttccagggg
ctgctggaaatcgcccgctccctcgattccttcgctctgtccactgaggctgccattggc
ctgcttaaaggcacagctctggtgctggctcggcttcctctggagaagatagcggagtgt
ctaagtgatttgtgctccgtgcaggtcttggctctgaagaagcttctgggacaagactcc
agtaatgggaaatcagcagacccaacagtatggctagacagactggcggtaatcttcaga
catacaaatcctatcgtagagaacgggcagacacatccctgtcagaaagtcatccaagag
atctggcctgtgttgtctgagacactgaacacacaccaggcggataatcgaattgtggaa
cgttgctgccgatgtttgaggtttgctgtgcgttgtgtgggcaagggctcagcctcccta
ctgcagcccctcgtcacacagatggtgaatgtatatcaggtctatccccactcctgcttt
ctgtacctgggtagtattctggtggatgaatatggtatggaggagggctgtagacaaggg
ctgctggacatgctgcaggcactctgcatgcccaccttccagcttctggagcagccaaat
ggcctccgaaatcaccctgacactgtggatgacctattcagacttgctactaggtttgtc
cagcgcagtcctgtcacattgctcggtagcaacatcattgtccacatcatccagtgtgcc
attgctgcaacaaccctagatcacagggatgctaattgcagtgtcatgaagtttgtcaga
gacctcattcacacgggggtttcaaatgatcatgaggacgactttgagttgcgcaagcgt
ctgattggtcaagccatggagcaacatgggcagcagttggtcactcagctgatacacacg
tgttgcttctgcctgccttcgtacacactgcctgatgtagctgaagtgctctgggagatc
atggtctttgaccggccgaccttttgccgctggctagaagctgcactgaaaggactcccc
aaggagatgtcgggaggggctgtaactgtcactcataagcagctcacagacttccataag
caggtcacaagtgcagaggagtgtaagcaggtatgctgggcagtcagagagttcaccagg
ctttaccgatag
DBGET
integrated database retrieval system