Astyanax mexicanus (Mexican tetra): 103043138 Help Entry 103043138         CDS       T05042                                  Symbol cdc40 Name (RefSeq) pre-mRNA-processing factor 17   KO K12816   pre-mRNA-processing factor 17 Organism amex  Astyanax mexicanus (Mexican tetra) Pathway amex03040   Spliceosome Brite KEGG Orthology (KO) [BR:amex00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     103043138 (cdc40)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:amex03041]     103043138 (cdc40) Spliceosome [BR:amex03041]  Complex C   Other components    Step II factors     103043138 (cdc40) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I WDR55 Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_NWD2_C WD_LRWD1 Beta-prop_Vps41 Motif Other DBs NCBI-GeneID:  103043138 NCBI-ProteinID:  XP_007255715 Ensembl:  ENSAMXG00000013725 UniProt:  A0A8B9JFC7 LinkDB All DBs Position 1:complement(54193954..54218325) Genome browser AA seq 578 aa AA seqDB search MAAVLGSLVAYGSDSDSENEPESSTSPEKTHPDAVAHLQPLKSDRTTSLAVLNSAPEVAV KEDVETGTHLDPSLKEVSYNPTYDTMFAPEFGPVNPFKTQQMAAPRNMLSGYAEPAHVND FMFEQQRRTFSTFGYALDPSVDNSQLSSNSYIGAVDEAEKKKGLTVFEAGPKKGEKRKKV KGGDASEIDSFLGPWAKYQDEKDVTKPSEEEQKELDEIIAKRQKKGRNEEEAPAEEKTIL HVKEAYDYQGRSYLHIPQDVGINLRSADIPEKCYLPKKQLHVWTGHTKGVSAIRLFPVSG HLLLSSSMDCKIKLWEVYSDRRCLRTFIGHSKAVRDICFNNSGTQFLSAAYDRYLKLWDS ETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQFDIRSGEVVQEYDRHLGAV NTITFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSM DNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWKTTK LYHRIKAHDKVCISALWHPHETSKVITCGWDGQIKLWD NT seq 1737 nt NT seq  +upstreamnt  +downstreamnt atggcggcggtgctcggctccctcgttgcgtacggcagcgattccgattcggaaaatgaa cctgagtccagcacgagcccggagaaaacacacccggacgcagtggcgcatctccagcct ctgaaatccgacagaacgacgagtctggctgttctcaattcagcgcccgaggtcgctgtg aaggaagatgttgagacaggcacacatttggatccctcacttaaagaggtcagctacaac cctacatatgacaccatgtttgcacctgagtttggtccagttaatccattcaagacacag caaatggctgcgccgaggaacatgctctccggttatgctgagcctgctcatgttaacgac ttcatgttcgaacaacagagaagaacgttttccacattcggctatgcattggacccatct gtggacaacagtcagctctcttcaaacagttatattggagcagtggatgaggcagagaaa aaaaaaggtctgactgtttttgaagctggcccaaagaagggagagaagaggaagaaggta aaaggaggggatgcatcggagattgacagcttcttgggaccctgggccaaatatcaggat gaaaaggatgttaccaaaccctcagaggaggagcaaaaagagttggatgaaattatagca aagagacaaaagaaaggaaggaatgaggaagaagcacctgcagaggagaagaccattcta cacgttaaagaagcttacgactaccaaggccggtcttacctgcacattccacaggatgtg ggtattaatctgcgctcagcagacataccagagaagtgctatctgcccaaaaagcaactg catgtctggacgggacatacaaagggcgtcagtgctattcgcttgtttcctgtgtctggt cacctgctgctttctagttctatggactgcaagatcaagctgtgggaggtgtacagtgac cggagatgcctacggacatttattggtcacagtaaggcagtgcgtgatatctgtttcaat aactccggtactcagttcctcagtgctgcttatgatcgctatctcaaattgtgggattcc gagactggtcagtgcatctcccggttcacaaaccgaaaagtcccctactgtgtaaagttc aatccagatgaagacaaacaaaacctgtttgttgctggaatgtcagacaagaagattgtg cagtttgacatccgctcaggggaggtggttcaggaatatgaccgtcacttgggagctgtc aatacaatcacgtttgtggatgaaaaccggcgctttgtcagcacctctgatgataagagt ctgcgtgtgtgggaatgggacattcctgtagacttcaaatacattgcagagcccagtatg cattcaatgcctgctgtgacgctttcacccaatggtaaatggctggcttgtcagtccatg gataatcagatccttatatttggggctcagaaccggttcaggctgaacaaaaagaagatc tttaagggtcacatggtggctggatacgcctgccaggtggacttttctccagatatgagt tacgtggtgtctggtgatgctgatgggaagctaaatatctgggactggaagaccaccaag ctctaccaccgaatcaaagctcatgacaaagtgtgcatcagtgctctctggcatccccac gaaacttccaaggtcatcacctgcggctgggacggacagatcaaactgtgggactaa

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