Astyanax mexicanus (Mexican tetra): 103043197
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Entry
103043197 CDS
T05042
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103043197 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amex03009
]
103043197 (rexo1)
Ribosome biogenesis [BR:
amex03009
]
Eukaryotic type
Pre-60S particles
RNases
103043197 (rexo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Motif
Other DBs
NCBI-GeneID:
103043197
NCBI-ProteinID:
XP_007245848
Ensembl:
ENSAMXG00000016463
UniProt:
A0A8B9HV22
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Position
12:6083930..6104103
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AA seq
1281 aa
AA seq
DB search
MLRSTGFFRGVECPLAGCKRPYCHFRHSRPPAGLSASTRTRETSAGSNDQGYDPFSPEVV
RPGDQHNAKVSDLSEGPALDPGVMELELVNRAIEAVRSEMEKDKKKLSQIGDQGYEPAKS
SVKASQKRQLASATSSSHSAYDPGSYQMGQPADYNPTPRSSKYTLDSESSSHANSMEYVP
TAVSKPGVKKAVPPPATTRTPAAGLQSSSKCKYTLDNSKPSTDMEYDPLSNFSAKLAAKK
SGKNLAGLAAEVDGRKRTHSTGWEKQSTDEEYVPTVKKTRQMPQTVADKPKYTASFTDSD
EESSGTEYRPTPMNRLQRRKSSTGSTEDNSRRSEAEVRSSGHKRLHESLAESFDSDLEMP
DVEEVNDKPLNKKVTGHSDQIKSKSRSEKSKKEVKEVLKKSTNSSNSSSSHKDTHKKGSS
KESTEKTSKKPLQESVKKEKSHGKTIEEKVRPKEKNSEGSCKEGKDGKSKKVEKVKVDKE
KERRGSGGSSDAKRAKTDKVDQSKKESSKYKEQKNGKLEISSREKDKKKISSSSNSSKDK
KIKKSSSSLDQKETKAPKTKPRSLSHADLFGDESAEENEDEDDDDDDEDERIVRKSASAF
KRVALPSNKRKASDPAVSSSEDDDGSEDEGQNNVDDHNDDDDNVLEDYAALQEDLDYDSD
PMEECLRIFNESKDVKTEDKGRQAKQAPREDQEDEEAHSTLTTLFPGQKKRVSHFKAKGN
EETSLNTTPKPQRRLTAQQMCYQRMQIAQQQAAQLAAAVKTASASSGSAHKPTLSPVFAG
EKRRVMHKPNPALVSAKPGLSEAQRAGRGVLSPARVAPDQPSVKAQTSAAMLSKTISTSA
QKRVAHTPTLKSSSMKRPVIPTEFGAKVPTNVRQRYLNVFIDECLKFCSSEEAAFQMALE
EEKLVYDRSNSKNIYLNVAVNALKKLRSKSANAASTTTKKTAGSAGRKVQSHEGVLGGRL
AATTSYTINRTGKQQDMELKGAVLYRKLKEYVLTEEQLQEHCYPRPNPDRLGHAIIYNIP
EKNKNTEPFSKVCCRCGADYKINANGNCVRKEECSHHWGRLRRYRVPGGWETQYNCCSGA
VGSPGCQVSKQHVQDGRKESLEGYVQTFSKSLPADGNGGVYALDCEMCYTKQGLELTRVT
VINADLKVIYDTFVKPESKVVDYNTRFSGVTEEDLENATMRLRDVQAVLLNMFSAESILI
GHSLESDLTALKLLHSTVVDTAVVFPHRLGLPYKRALRNLMADYLKRIIQDNVEGHDSSE
DAAACMELMIWKIKEDAKVKR
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctccactggctttttccgcggggttgagtgtccgctggcaggctgtaagaga
ccctactgccacttcagacactcccgaccaccggccggactcagcgcctctacccggacc
agagagacctccgccggctccaacgaccaagggtatgatccgttcagtcctgaagtggtc
agaccaggagaccagcacaatgccaaggtgtcggatctgtcagaaggcccagccctggac
cctggggtcatggagctggagctggtcaaccgggctatcgaggctgtgcggagcgaaatg
gagaaggacaagaagaaactctctcagattggggaccagggatacgagcctgctaagagc
tcagttaaagcaagtcaaaagagacaattggcttctgctacgtcatcgtcccatagcgct
tacgaccctgggagttatcagatgggccagcccgctgactacaaccccacgcctcgctcc
agcaagtacactctggactcagagagcagcagccatgcgaattccatggaatacgtacct
acggctgtttctaagcctggggtgaaaaaggcagtgccgcctcctgcgacgacccgtact
cctgctgcaggccttcagtcttcctcaaagtgtaaatacacactggacaattccaaaccc
tccactgatatggagtatgatccactttcgaacttttcagctaaactggcggccaaaaag
agtgggaaaaatttggccgggctggcagcagaggtggatggcaggaagaggacgcactct
acaggctgggagaagcaaagcacggacgaggaatatgtaccaactgtaaagaagaccagg
cagatgccacaaactgtggcagataagccaaagtacacagccagcttcactgattctgat
gaggagagttccggcacggagtaccgccccacgcccatgaaccgtctgcagcggaggaag
agcagtacggggtctacagaggacaacagcaggagatcggaagcggaggtcagaagtagt
ggccataaacgacttcacgaaagcctggcagaaagctttgattctgacttagagatgccg
gatgtcgaggaggttaatgacaagccactcaataagaaagtgactggacatagcgatcag
ataaagagtaagagtagatcagaaaagtcaaagaaagaggtcaaagaggttcttaagaaa
agcaccaacagtagcaacagcagcagcagccataaagacacccacaagaaaggaagctcc
aaggaatctacggagaagacttccaaaaagccccttcaggagagtgtgaagaaagagaag
agccatggaaagaccatagaagaaaaggtcagacccaaagagaagaactcagagggaagc
tgcaaagaagggaaagatggaaagagcaaaaaggtggaaaaggtgaaagtggacaaagag
aaagagcgaagaggaagtggaggaagtagtgatgctaagagggccaaaacggacaaagtg
gaccaaagcaaaaaggagtccagcaaatacaaagaacagaaaaacggaaaattggagatt
agcagtcgagaaaaagacaaaaagaaaattagtagcagcagcaacagcagcaaagacaaa
aagatcaaaaagagcagctcatccttggatcagaaagagactaaagcacccaagactaag
ccacgctccctcagtcatgccgacctttttggagatgagagtgcagaggagaacgaggac
gaagacgacgatgatgatgacgaagatgagcgtatcgtcaggaagtctgcctcagctttt
aaacgagttgctctgcccagcaataagagaaaggcttcagatcctgcagtgtcttcatca
gaggacgatgatgggtctgaagatgaagggcagaataatgttgatgatcataatgatgat
gacgacaatgttcttgaagattatgcagcactgcaggaggatttagactacgattcagat
ccaatggaggagtgtctgaggatctttaatgagtccaaggatgttaaaacagaagacaaa
ggaaggcaagctaaacaggctcccagagaggatcaggaggatgaggaagcacacagcact
ttaaccacactcttccctggccagaagaagagagtttcacactttaaggccaaaggaaat
gaggagacgtcgctgaacaccacgccgaagccgcagaggagactgactgcgcagcagatg
tgttaccagcgcatgcagatcgctcagcagcaggcagcgcagctcgccgctgccgtgaaa
actgcgtccgcatcctcaggctccgcccacaaacccaccctcagccccgtgtttgcaggg
gagaagaggagagtgatgcacaaaccgaaccccgccttagtctctgcaaaacctggtttg
tcagaagcgcagcgggctggccgcggggtgttgtcacccgccagggtggcaccagatcag
ccgtcagtcaaagcccagacatctgctgccatgctgtctaaaaccatatcaacttctgca
cagaagagagtggctcacaccccaaccctcaagagctcttctatgaagcggccagtcatt
cccacagagtttggagccaaagtgcccacaaatgtccgtcagcgctacctcaatgtcttc
attgatgaatgtcttaaattctgctcctcagaggaggctgcttttcagatggctctggag
gaggagaagcttgtgtatgaccggagcaacagtaaaaacatctacctgaatgttgcagta
aacgcactgaagaaactccgcagcaagagtgccaacgctgcctccactaccaccaaaaag
actgctggctcagcaggcaggaaggttcagtctcatgagggagttctgggcggccggctg
gcagctacgaccagctacaccatcaaccgcacgggcaaacagcaggacatggagcttaaa
ggtgcagtcctctaccggaagctgaaagagtatgttttgactgaagagcagctgcaggaa
cactgttaccccagacctaatccagaccgcctgggtcacgcaatcatctataacatccca
gagaagaacaaaaacacagaacctttctctaaggtgtgctgtcgatgtggagccgactac
aaaatcaacgccaatggcaactgtgttcgcaaagaggagtgcagccaccactggggcaga
ttacgccgatacagagtgccgggaggttgggagactcagtataactgctgctcgggtgcc
gtgggctctcctggctgtcaggtgtctaaacaacacgttcaggatggccgtaaggagtct
ttagaaggctatgtgcaaaccttcagtaagtcattaccagctgatggcaacggaggagtc
tacgcactggactgtgagatgtgttacacgaagcaaggcttggagttgaccagggtcact
gtcatcaatgcggatcttaaggtgatttacgacacgtttgtgaagccagagagtaaagtg
gtggactacaacacacggttctcaggtgtgactgaggaggatctggaaaacgctacgatg
aggctgcgagacgtccaggctgtgttactgaacatgttcagcgctgagtccatcctgatt
ggccacagtctagagagtgacctcacagccctcaagctgctgcacagcacggtcgttgac
actgctgtggttttccctcaccgcctcgggcttccctacaagcgcgctctccgcaacctc
atggccgactacctcaaacgcatcatccaagacaacgtggagggacacgactccagcgaa
gatgccgccgcctgcatggagctcatgatatggaagatcaaagaggacgccaaagtgaaa
agatga
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integrated database retrieval system