Astyanax mexicanus (Mexican tetra): 103043212 Help Entry 103043212         CDS       T05042                                  Name (RefSeq) collagen alpha-1(XX) chain   KO K24357   collagen type XX alpha Organism amex  Astyanax mexicanus (Mexican tetra) SSDB OrthologParalogGene clusterGFIT Motif Pfam:  fn3 VWA Collagen Pur_ac_phosph_N Ig_DSCAM-DSCAML_C VWA_2 FN3_Tor_3rd DUF2529 Motif Other DBs NCBI-GeneID:  103043212 NCBI-ProteinID:  XP_049318722 Ensembl:  ENSAMXG00000012384 LinkDB All DBs Position 13:35160468..35201587 Genome browser AA seq 1555 aa AA seqDB search MALITGIVFLILASGVYAQGRLKLTVLSEDRLQMKWKEAEGAVQGYRVRVRSISVPQPEM MLTTTRGKATVVGLDSRQEYLLQVLVLNGTGEKLIAKRRFTISGLREEELVRNGNREQKK KVLAVGSGSGEMDDVTEALESMPTVLYQEPTTTEPPTVSDQEEQEVEKSSRDKKKKKKEK SLTKLEEKDEQVESRELPAEEEDKVRKSMPTQPGTAGASRKPFECRAGVQADLVLLVDGS WSIGRTNFRKVREFLEGLVMPFFIGPDAVQIALSQYSGDPRTEWQLNNFTTREQLLDAVR NFRYKGGNTFTGQALIHVLEENLNEESGARSDVPRFVLLLTDGKSQDDAVTAATRLKSEG VEIIAVGVKNADEAELRQVASEPLELNVYNVNDFPLLSKLVSRLVRILCGKIEDRSKTKR MERPTEDPVLSYPSPTELQYSELGSKEVRVSWTGPSRTVQQYRVVFHSSEGQSPQEVVVN GSVSTVMLTGLSSQTQYHLSIFPVYEHNVGSPLRGIFTTLPLAMPHSLEVTASSPTTLRV HWRPAPGATQYMALYSALTDGEPDDAREVKFGADETDVELQDLMPSTDYSVTLYALYDEE PSDPITAVASTFPLPSPLSLQFPMVSHSTLRVTWVPGAVSVPAHRITYSTNHGSDVKQVE VTGVNTVLLQNLASLSRYLVSVQSHYDKGLSTPLTANVTTLRVPAPSELRVTNYSESSLT VRWEAAADDVTSYLIKWISLSGGDLRQLKVDGESEGAILEEVEDDKEYQISLSALYADGA QSDAVAIRYSTLSGGGPSSMSISEETAVSMLVSWVPPNAHVLRYHVSYTPLTGAEARENT VSLPGSEQRVLLQSLQPDTRYSVLVTAEYRNREGGSASAQAKTTSLRVSSVSVVRSDHSS VCVSWRPVVAVTAYRIVIQALRDKHTKEDTVDATSNSHCFSELQPETVYRISVHSRLGTV ESAAVTILHPTAVAPVRIQLPPKLHPIQNEMCPETTIRNNVIKGFNMMEAFGLTQRAHST VEGVAAEPFIFSSLPSYTLYRDTQLTQSTAFIHPAGFAPEHTISMAFRLLQDSPREPFAL WQLTDNDFQPKMGVVLDPERKVLLYFSLDYRGEVQELTFDQPQVHTLFYGSFHKIHLSVS QVGVSLSVDCQRVGERPARPLGTLPTDGFEMLGKLVRTRGPRSGSAAFQLQSFEIVCNTT WASEDTCCDLPAQRDEESCPAPAYACTCTSDIPGAPGDTGPPGKPGPRGEKGEKGEDGQK GEMGPPGKAGPEGGFGSMGSIGPRGITVMGKMGPPGIRGEKGDMGRPGNQGLPGPPGPKG AEGNAGPKGTRGMEGNMGPPGTTGPRGFQGMPGHPGPAGERGPLGSVGPTGLPGSKGERG EKGEPQSLAIIYQLVTQACEKLVHNEVLKIDAFLNEISRNPVPIQEPVGPPGEPGIPGGK GPPGPRGPPGRQGDRGESGKPGYPGEQGRRGASGAKGAPGINVQGPQGSKGFAGPPGEAK VGMQGPRGDDGNQGAPGLPGLVGQPGEMGPPGACDSSGCHRGDPLAEDPYFGYQP NT seq 4668 nt NT seq  +upstreamnt  +downstreamnt atggctctcatcactgggatagtattcctaatactggcctctggagtgtatgcacaaggc cgattaaagctgactgttctatcagaagaccggctgcagatgaagtggaaggaggctgag ggggcggtgcagggctacagggtcagagtgcggtcaatctcagtgccccagccggagatg atgctgaccaccacacggggcaaggcaacagtagtggggctggactccagacaggaatac ctgctgcaggtgctggttctgaacggaacaggagagaagctcatcgccaagagacgcttc acaatcagcgggctgcgggaggaggaactggtgaggaatggaaaccgtgagcagaagaag aaagtgctggcagtgggctcgggctctggagagatggacgatgtaacagaggctctggaa tcaatgcccactgtgctctatcaggagcccaccaccacagagccccctacagtatctgac caagaagagcaggaggttgaaaagagcagcagagataagaaaaagaaaaagaaagaaaag agccttacaaagctggaggaaaaggatgagcaggttgaaagcagagagctgcctgcagaa gaggaggacaaagtaagaaaaagcatgcccacccagcctggtacagctggtgcctcgcgg aagccgtttgagtgcagggctggagtgcaggctgatcttgtcctgctggtggacggctct tggagcatcgggcgcacaaacttcagaaaagtacgagagtttctggaggggctggtcatg cccttctttatcggcccagatgcagtacaaatcgctctgtcacagtacagtggagaccct cgcactgaatggcagctcaacaacttcactaccagagagcagctcctggatgctgttcga aacttcagatacaaaggagggaacaccttcacaggtcaggctctaattcatgttctggag gagaatctaaatgaggaatcaggagctcggtcagatgttcctcgttttgtgctgctttta actgatggaaaatctcaggatgatgccgttactgcagcgaccaggctgaagagtgaagga gtggaaatcatcgctgtgggtgtgaagaatgcagatgaggctgagttgagacaggtggcg tctgagcctctagagctgaatgtatacaatgtgaatgatttcccgctgctcagtaagctg gtgagccgattagtgcgcattctatgtgggaagatagaagaccgcagtaaaacaaagaga atggagcgtcccacagaggaccctgttctgtcgtaccccagccccaccgagctgcagtac tctgaactgggctctaaagaggtgcgtgtgagctggacggggcccagccggactgtgcag cagtacagggtggtgttccacagcagtgagggacagagcccacaggaggtggtggtgaat gggtctgtctccacagtgatgctgacgggactgtcctcccagacacagtaccacctgtca atcttccctgtgtacgagcacaacgtcggctctccacttcgaggcatcttcaccacactg ccactggccatgccgcactctctagaggtcactgcatcctctcccactactctgcgggtg cactggaggccggctcctggagctactcagtacatggcgctgtattctgccctcacggat ggggagcctgatgatgctcgagaggtgaaatttggggcagatgagacggatgtggagctg caggatctgatgccctccacagattactcagtcacgctgtacgctctgtacgatgaggag cctagtgatcccatcacagccgtcgcttccacgttccctctgccctctcctcttagtctg cagtttcctatggtcagtcacagcaccctgagagtcacctgggtgccaggtgcagtcagt gttcctgctcatcgcatcacttacagcaccaatcatggcagtgatgttaaacaggtggag gtaaccggtgtgaacacagtcttactgcagaatctggcctctctatccaggtatctggta tctgtacaatctcactatgacaaaggcttgtccaccccactcaccgccaacgtcaccaca ttgagggttcctgctccttctgagctcagggtcactaattactccgagagctctctgacg gtgcgctgggaggcagctgcagatgacgtgacctcataccttattaaatggatctctctc agcggaggagacctgaggcagctgaaggtggatggtgaaagcgagggagccatattggaa gaggttgaggacgacaaggagtatcagatctcactgtctgcattgtacgcagatggagca cagagcgatgctgtggctatacgctacagcacattgtccgggggaggccccagctccatg tccatctctgaggagacagcggtcagcatgttggtcagctgggtcccacctaacgcccac gtgctgcggtaccatgtatcttacacacctttaactggagcagaggccagagaaaacaca gtgtcattgccaggcagtgaacagcgagttctgctgcagtccctgcagcctgacactcgc tacagtgtgctggttactgctgaataccgcaacagagagggaggcagtgcctcagcacag gccaaaaccaccagtctgcgtgtgagcagtgtgagcgtggtgcgctctgaccactccagt gtctgcgtgtcctggaggccagtagttgcagttacagcataccgcattgtcatccaggcc ctcagagataaacacacaaaggaggacacagtagacgccaccagcaacagccactgtttc tctgagctgcagccggagactgtgtatcgcatcagtgtgcactcccgcctggggacagta gagagcgctgccgtcactattctccatcccacagctgtggcaccagtcagaatacaactt cctcctaagctgcatcccatacagaatgaaatgtgtcctgaaaccaccattaggaataat gtaattaaaggttttaatatgatggaggcgtttggtctgactcagagggctcattccacc gttgagggcgtggcagcagaacctttcatcttcagctctctacccagctacaccctctac agagacacacagcttacccagagcacagcttttattcacccagctggctttgctccggaa cacaccatcagtatggccttccgtctgctacaggactcacccagggaacccttcgccctc tggcagctcaccgacaacgacttccagcccaagatgggggtggtgctggaccctgagaga aaagtgctgctgtacttcagtctggactacagaggagaggtgcaggagctgacctttgac cagccacaagttcacactctcttctacggcagcttccacaagattcacctgtcagtcagt caagtgggtgtgtccttgtctgtggactgtcagcgggttggagagagacccgcccgtcct ctgggaactttacctacagatggctttgagatgctgggtaaactagtgaggacccgaggg ccccgcagcggatctgctgctttccagcttcagtcgtttgagatagtgtgcaacactacc tgggcctctgaggacacgtgctgtgatctgcctgctcagagagatgaggagagttgccct gctcctgcgtatgcctgtacctgcacctctgacatccctggagcacctggagatactggc cctcctgggaaacctggtcctcgtggagagaaaggggagaaaggagaggatggacagaag ggtgaaatgggacccccaggcaaggcagggcctgaggggggctttggctctatgggttcc attggccctcgaggcattacagtaatggggaaaatggggcctccagggattaggggagag aaaggagatatgggaaggcctggaaaccaggggttgccaggaccacctggtcctaagggt gctgagggaaatgcaggacctaaggggaccagaggtatggaggggaatatgggaccacca gggactacagggccacgaggtttccagggaatgcctggccacccagggccagccggagag agggggccacttggatctgtcgggccgacagggcttcctggaagtaaaggagagagagga gagaagggagagccacagtctcttgccatcatttaccagctcgtcacacaggcctgtgag aagctagtgcacaatgaagtgctaaagatagacgccttcctaaatgagatcagtcggaac cccgtgcccatccaggagccagtcgggcctccaggtgagcctggaatcccaggagggaaa ggaccccctgggcccagaggcccaccgggacggcagggagaccgaggagaatcaggaaaa ccaggataccctggcgagcagggaagaagaggtgcatctggagctaaaggagctccaggg attaacgttcaaggtccacaaggatcaaagggttttgcaggaccccctggagaagcaaag gtagggatgcaagggcctagaggtgacgatggtaatcaaggtgctcctggtcttcctggg ctggtgggtcagccaggtgagatggggccccctggagcgtgtgacagtagtggctgccat cgaggagaccctctagcagaggatccatacttcggataccagccttga

DBGET integrated database retrieval system