Astyanax mexicanus (Mexican tetra): 103043221
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Entry
103043221 CDS
T05042
Symbol
ythdc1
Name
(RefSeq) YTH domain-containing protein 1 isoform X5
KO
K20100
YTH domain-containing protein 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amex03041
]
103043221 (ythdc1)
Spliceosome [BR:
amex03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
103043221 (ythdc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
103043221
NCBI-ProteinID:
XP_007229742
Ensembl:
ENSAMXG00000006978
UniProt:
A0A8B9K4L1
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All DBs
Position
1:10371928..10395020
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AA seq
684 aa
AA seq
DB search
MAVDRRDDKDGELNVLEDILTDAPDQDDELYNPESEHGVSEKKGSKRKNDRGDSHDTKRL
RSAGHSTRQPVKRSAPSTGANGKKVTNLRGRHPPEDFYDDRKNHSGRGGSSRADLSKGHS
EKPLNRSRDQQRRIKPLMPELNEKLRRTSESSIGRASHSSKEEEEEARSEEYASDQETGS
SVGSSEGNRSDGEEEEVMEEEEEGEKDDEEEEEEEVEEEEGEEEEYELEEGDQREGNEQN
DYDTRSEASDSQSESVSFSDGESVHSGSGSDASGSEKKHEKLPSSVRAVRKDQTSKLKYI
LREARFFLIKSNNHENVSLAKAKGVWSTLPVNERKLNAAFRSARSVILIFSVRESGKFQG
FARLSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKTAHLSNPWNEHKPV
KIGRDGQEIEPECGMQLCMLFPPDESIDLYQVIHKMRHKRRMHSEPRSRGRPPHREPAPR
DPGRRRPEEYDMHNRKRPRVDYPAEFPQRPGFIQDPRNPPVDRRFSGVRRDVFLNGSYND
YMREFHHNIGPPPPWQGMAPYPGMEQPPHHPYYQHHPPPPQTHPPYSGHHPMPHDARFRE
KRVVRSFSSSLHDYDMRVDDFLRRTQAVVSGRRSRPRERERQRERDRPRDARRDRERERG
RERDRERDRMRDREREKERGRYRR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcgatcgacgagacgacaaagatggagagcttaatgttcttgaagacatattg
actgatgctccagaccaagatgacgagctgtacaaccctgaaagtgaacacggtgtcagt
gaaaagaaagggtccaaaaggaagaacgatcgtggggacagccacgatacaaagcggctt
cgatctgcaggccactcgaccaggcagccagttaaaaggtcagccccttccacaggagcc
aatgggaagaaagtgactaatctaagaggaagacacccacctgaagacttttacgatgat
agaaagaaccattctggcagaggtgggtcgtccagggctgacctgtctaaagggcacagt
gagaaacccctgaaccggagcagagaccaacagaggaggattaaaccgctgatgccggag
ctgaatgagaagctgcgtaggaccagtgagagtagcattggcagggccagtcactcatct
aaagaagaagaggaggaagcccgatcagaggagtacgcttcagatcaggaaacgggcagc
tccgtgggctcctctgagggcaaccgctctgacggggaggaagaggaggtcatggaggag
gaagaggaaggagagaaggatgacgaagaagaggaggaggaagaggttgaagaagaggaa
ggggaagaggaggagtacgagctggaggaaggtgaccagcgggaagggaacgaacagaac
gactacgacacgcgcagtgaagccagcgactcgcagtctgagtcagtctctttttctgac
ggagagtctgtacattctggctcaggctcggacgcctcagggtctgagaagaagcatgag
aaactcccctcatcagttcgagctgtgagaaaagatcaaactagcaagctgaagtacatc
ctcagagaagccaggttctttctgataaagagcaacaaccatgagaacgtttctctggct
aaagcgaagggagtatggtccaccctgcctgtgaacgagaggaagctgaatgcagcgttt
cgctcagctagaagtgtcattctcatcttttctgttagagaaagcggcaagtttcaaggt
tttgctcggctttcgtcagaatcacaccacggaggatcgcccatccactgggttctgcct
gcaggcatgaacgccaagatgctcggaggagtcttcaaaattgactggatctgcaggcga
gagttaccattcacaaaaacggcacacctttccaatccctggaacgagcacaaacctgtg
aagattggacgtgatggacaggagatcgagccagagtgcgggatgcagctgtgcatgctc
ttccctccagacgagagcattgacttgtatcaggttattcacaaaatgcgccacaagagg
aggatgcattcggagccccgctcccggggccgccccccgcacagagagcccgccccccga
gacccgggaaggcgtcgcccagaagaatacgacatgcacaacaggaagcggcccagggtt
gactatcctgctgagttcccccagagaccaggttttatccaagaccctcgcaatccacct
gtggacaggcgcttttctggagtaaggagagatgtgttcctcaatgggtcttacaatgac
tacatgcgagaattccaccacaacattggaccaccaccaccatggcaagggatggcacca
tacccaggaatggagcaaccaccacatcacccatactaccagcaccatcctccgccaccc
caaacccaccctccctactctggccatcatcctatgccccacgatgctcgattcagagag
aagagggttgttcgctctttttcttctagtctgcatgattacgacatgcgtgtggacgac
ttcctgaggcgtacccaagcggtggtgagcggccgcagaagccgcccgagagaacgtgag
cgacagagggaacgcgacagacctcgggatgcccgaagagacagagagagagagcgcggg
cgcgagagggaccgcgagagagaccgcatgagagaccgagagagggagaaggagaggggg
cgctatcgtagatag
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