Astyanax mexicanus (Mexican tetra): 103043232
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Entry
103043232 CDS
T05042
Symbol
pola1
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103043232 (pola1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amex03032
]
103043232 (pola1)
Enzymes [BR:
amex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
103043232 (pola1)
DNA replication proteins [BR:
amex03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
103043232 (pola1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
DUF1744
Motif
Other DBs
NCBI-GeneID:
103043232
NCBI-ProteinID:
XP_049342460
Ensembl:
ENSAMXG00000007751
LinkDB
All DBs
Position
1:complement(99358970..99439744)
Genome browser
AA seq
1466 aa
AA seq
DB search
MAPVSNPDKDADGGDYDDADSCGLAASRSRREKREKVGRKSALEQLKRAKKGEKIKYEVE
DISSVYEEVDEEQYSKMVRDRQDDDWIIDDDGTGYVEDGREIFDEELEDNVAEKGPKGKS
GQGGGSKENKNAKKLAVSKPNSIKSMFMNSNVKRPTEKDVDLSKDDLLGDILQDLHSEKP
VLTPPPVITLKKKKALGSPMNPFSVKSQTPKESPTAPVSKPRLTVPCPPPTEPSPRPASK
PAPSVQTKKLKVEEPEEVGDSLDFDEMDFDEPMDLGAEEQKKVTVKVEAEPEPIVKVEPK
TEPQEEVLKSGMVGGSCWEKMEEEEADEAPVEVQVDSSQLPLVEGPDGEMVFRFYWLDAF
EDQYNQPGVVYLFGKVWIESAKAHVSCCVAVKNIERTMYFLPRENKVNLQTGEVTDVPVG
MMDVYQEFNSLSEKFKIMKFKSKKVEKNYAFEIPDVPTQCEYLEVRYSAEMPQLPSDLKG
TTFSHVFGTNTSSLEHLLLSRKIRGPCWLDIKTPTLSSQPMSWCKVEAIALKSDLISVVK
DLTPPPLVVMSISLKTVQNPKTHHNEIVSLAALIHYKFPLDKASPRVPYQTHFCVVSKPN
DCIYPYDFNEAVRKKKGIVEIAATERTLLGFFLAKMHKIDPDVIVGHDILGFDLEVLLQR
ITVCKVPFWSKIGRLRRANMPKLGGRGGFAEKSAACGRLVCDVEVSAKELIRCKSYHLTE
LAAQILKTERAVVAPENIRNMYSDSPHLLYLLELTWMDAKLILQIMCELNVLPLALQITN
IAGNVMSRTLMGGRSERNEYLLLHAFHEKNYIVPDKQFFKKPQQDPGEDEDVDVGKNKSG
KVKKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQREATGSRKKTE
EDDFNEVPELPDPDLEMGVLPKEIRKLVERRRQVKQLMKQPDLNSDLYLQYDIRQKALKL
TANSMYGCLGFSFSRFYAKPLAALVTHKGREILMHTKDMVQKMNLDVIYGDTDSIMINSN
STNLEEVMKLGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALMVEQQGDGRYTTK
QEFKGLDIVRRDWCDLAKECGNYVLGQILSDQNRDTILENIQQHLIEVGEKVASGSIPVN
MFEIHKALTKDPQDYPDKKSLPHVHVALWINSQSGRKVKAGDTISYVICQDGSNLAASQR
AYAPEQLQKQQGLSLDNQYYLSQQVHPVVGRICEPIEGIDGVLIATWLGLDPGQFRAQQR
QQREEESDGLLGVPAQLTDEERYRDCERFSFFCPDCGTENIYDSVFEGTGSVLEPSLKRC
CHIPCGGSPMDHHVKISNKLLLDIRRHIRKYYSGWLVCEDQACQNRTRRLPVAFSRSGPI
CPLCCKSTLKPEYSEKALYNQLSFYRYIFDWDYAANKSEEKQRCKSWNQEKEVYKKIKGV
VDRTLASSSYSEVNLAKLFQTFTTLK
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atggctccagtttcaaatccagataaagacgcagacggtggggattacgatgatgcagac
agctgtggtcttgctgcatcccgttccagacgggagaaacgagaaaaagtgggccgcaag
tccgcactggagcagctcaagagagcaaagaagggagagaaaataaaatatgaggttgag
gacatctccagtgtgtatgaggaagtggatgaggagcagtactcgaaaatggtgcgggac
aggcaggatgatgactggattattgatgatgatggaacaggctatgtggaggatggcaga
gagatctttgatgaggaactggaggataatgtggcggaaaaaggccctaaagggaaatcg
ggtcaaggaggcgggtcaaaagagaacaagaatgctaagaagttggcagtcagtaaaccc
aacagcataaagagtatgtttatgaacagcaatgtcaaaaggcctacagagaaagacgtt
gacctgtccaaagatgatcttctgggagatattctacaagatctgcactctgagaaacca
gtgctcactccaccaccggtcattaccttgaagaagaagaaagcactgggatcccccatg
aaccccttttctgtcaaatcacagactcccaaggagtcaccaactgccccagtatcaaag
cccagactcacagtcccatgcccccctccaactgaaccctcaccaaggccagcctctaaa
ccagctccctctgtccagaccaaaaagctaaaggtggaggaacctgaggaagtcggtgac
tcgttggattttgatgaaatggactttgatgagccaatggacctaggtgctgaggaacag
aagaaagtgacggttaaagtggaggcagaacctgagcctattgttaaagtagagcccaaa
actgaaccacaagaagaggtgttaaagtcaggcatggtgggaggatcctgctgggagaaa
atggaggaggaggaggctgatgaagctcctgtggaggtgcaggtggattctagccagctc
ccattggtggagggtccagatggagaaatggttttccgcttttactggctggatgccttt
gaagaccagtataaccagccaggtgtggtgtacttattcggcaaggtgtggatagagtca
gctaaagcccatgtcagctgttgtgtggctgtgaagaacattgaaagaactatgtacttc
ttgccacgggagaataaagtgaacctgcagactggtgaggtgacagatgttcctgttgga
atgatggacgtttaccaagagtttaacagcctgtcagaaaaattcaaaatcatgaaattt
aagtccaagaaagtggagaaaaactacgcctttgagattccagatgtgcctacccagtgc
gagtacctagaagtgcgatactctgctgagatgccccagctgccatctgacctgaagggc
actaccttctcccatgtgtttggtaccaacacttcaagcttggagcacctcctcctcagc
agaaagatccgtgggccatgttggcttgacattaaaacccctacacttagcagtcagcct
atgagctggtgtaaggtggaggccattgctctgaaaagtgacctgatttcggtggtgaaa
gaccttactcctcctccactggttgtcatgtctatcagcctgaagacagttcagaaccca
aagacccaccacaatgagattgtgtccctggctgctcttattcactacaagtttcctctg
gacaaagcttctccacgtgtcccttaccagacccatttctgtgttgtgagcaagcccaat
gactgtatctacccctatgatttcaacgaggcagtcagaaaaaagaaaggcattgtggag
attgctgcaactgaacgaacacttttgggcttcttcttggctaagatgcacaaaatagat
cctgatgttatagtgggtcatgacatcttgggatttgaccttgaagtgcttctgcagaga
attactgtgtgcaaggttcccttctggtccaaaattggacgactgagaagggcaaacatg
ccaaaacttgggggtcgtggtgggtttgcagagaagagtgctgcgtgtggtcgactggtg
tgtgacgtggaggtgtctgctaaggagctgatccgctgtaagagctaccatttgacggag
ctagcagcccagatcttgaagactgagagagctgtggtcgctccagagaacatcaggaac
atgtacagtgactctccacacctgctctacctgttggagctgacctggatggatgccaaa
cttattttgcaaatcatgtgtgagctaaatgtgcttccactggccctgcagatcaccaac
attgctggcaatgttatgtcccgcacactgatgggtggtcgctcagagcggaatgagtat
ctgcttctccacgccttccatgagaagaactacatagttccagacaagcagttcttcaag
aaaccacagcaggaccctggggaagatgaggatgtggatgtgggcaaaaacaagtctggt
aaagtgaagaagaaggctgcgtatgctggaggtctggttttggatcccaaagtcggtttc
tatgataaattcattctgctgctggacttcaacagtctgtacccgtccatcatccaggag
ttcaacatctgtttcaccacagttcagagagaggcgactggctctcgcaaaaagactgag
gaggatgactttaatgaggttcccgagcttcctgatccagatctggagatgggagttctt
cctaaagaaattcgtaagctggtggagcgtcgacgacaggtcaaacagctgatgaagcag
cctgatctaaactcagacttgtacctgcagtatgacattcgacagaaggccctgaagctg
actgctaacagcatgtatggatgcctgggtttctccttcagtcggttctatgcaaaacca
ctggctgcattggtcactcacaaaggcagagagatcctgatgcacaccaaagacatggtg
cagaagatgaatctggatgttatctacggagataccgactcaatcatgatcaactccaac
agcaccaacttagaggaggtcatgaaattgggtaacaaggtgaaaagtgaggtgaacaag
ctttacaagctgttggagattgacattgatggcgtgtttaagtctctgctgctgctgaaa
aaaaagaaatatgctgcactgatggtagagcagcaaggggacggccgctacaccaccaag
caggagttcaaaggtctggacattgtgcgcagggactggtgtgacctcgccaaggagtgt
ggcaactacgtgctaggtcaaattctgtcagaccagaatcgcgacactatattggaaaac
attcagcagcacctcattgaggtgggggagaaggtggccagtggcagcatccctgtaaac
atgtttgagattcacaaggccctgacaaaggaccctcaagactacccagataagaagagt
ctcccccatgttcatgtagccctgtggatcaactctcagtcaggcaggaaagttaaagca
ggcgataccatatcctacgtcatctgccaggatgggtcaaatcttgcagccagtcagagg
gcgtatgctccagagcagcttcagaaacagcaagggctgagcctggacaaccagtactac
ctctcccagcaggtgcatcctgtggtgggccgtatctgtgagccaattgaaggcattgat
ggtgtgctgatcgccacgtggttgggactggatccagggcagtttcgtgcccagcagaga
cagcagcgtgaggaggagtctgatggtcttctaggtgtcccggcacagctcacagatgag
gaacgttatcgtgactgtgagaggttctccttcttctgccctgattgtggcactgagaac
atctatgattctgtctttgagggaacggggagtgttctggagcccagcttaaagcgctgc
tgtcacatcccttgcggtggaagccccatggaccatcacgttaaaatcagcaacaaactg
ctgctagacatccgccgacacattcgcaaatactacagtggttggctcgtgtgtgaggac
caagcgtgccagaaccgaactcgacggctgcccgttgcgttttcccgttcgggccctata
tgtccactttgctgcaagtccactctcaagccagagtattctgagaaggcgctctacaac
cagctgagcttctacaggtacatctttgattgggactacgccgcaaacaaatcagaggag
aaacagagatgtaagagctggaatcaggagaaagaagtttataagaaaataaagggggtg
gtggatcgcaccttggcttccagcagctactctgaggtcaacctggcgaagctttttcag
accttcaccacactaaaataa
DBGET
integrated database retrieval system
