Astyanax mexicanus (Mexican tetra): 103043245
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Entry
103043245 CDS
T05042
Symbol
sh3tc2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103043245 (sh3tc2)
Membrane trafficking [BR:
amex04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
103043245 (sh3tc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_8
TPR_2
TPR_10
TPR_7
SH3_2
TPR_MalT
CFAP70_TPR_C
TPR_19
TPR_4
SH3_9
PGA28-like_dom
TPR_5
SNAP
Motif
Other DBs
NCBI-GeneID:
103043245
NCBI-ProteinID:
XP_049339832
Ensembl:
ENSAMXG00000001194
LinkDB
All DBs
Position
10:50286895..50331877
Genome browser
AA seq
1448 aa
AA seq
DB search
MMSCCCRPPPCLRNCFLFSDISTAELDALWNEPPYTLTGANELFPGNDVMATGSDEEVET
EAEVETDGITGESYWRKREAFNGSSVSLAVGERFSSDVILVFSGKRRSSIEPDTHLQEAL
RTRLRVVESNSQDVIQLFKDLSARLVSVHAEKDCFVITFKTVEEIWKFSTYLALGYVARC
LENFLCDQSFWLDPVLLSDVEICVTVDEEHLATLYLGLLLQEGSFFAKALLNSEGTQEEE
EELVYRKNDLVMVKDIGQQGVWEGTLLSTGHHGLVPVHAMQPLPYPFYQWFLRKYPGNAG
GAISTKGLFNQPMVTGTCVAVVDHFPMVKDELHFSQGDLIEVEGFLISSLNIFIGRHHSS
GHRGFVHKAHVKPESVKPLSRQLVFLSEEERVALSQFNPCHDQNHRDLLDKLFSTDISTV
YRLDRLEDSDFTYIRNRSKQEQKNPVDARKSTISEKSETPPYHSSPRPSFYSSQTHLGRE
QEAFSFSLDDTFREMDEFEEDPPNYMDDSVWETEDAEFVDPLLTLLNLENFQDTFQSLYD
LSYSFLDTVFGGLPEDEVLLHLESLREGAKKGRMLWAHRRACFLLGRLCAKKLKYSQARV
YFEEALKVTVEGFDDTPLLIALYTNLTAVYLKQKMADKLPYILEKASALILCLPCHEFCS
LDEFELLKPILRKSVVDNDKHLEARTCYLILCLFLQLRKFEEALPFVERLQFLTITLSAE
EERPIGPIDFNWMLCRLYNKKYLPFLALASLSLDSGQDHSLEDAFQKIDLFIKNSFRLNP
RWRDGTTLLPAQVVVYLQQALSIANQGEDLKTQRDLCLCLASVYQQYGSLEKAVPFARQA
VQTGRNINEEEGFEASVLLAWLLVLTGDPEAAQSTLQPLLKSLNETDSPNQRGVVHNLLA
LCLRKQDSITEAAKNFHCALKISQENGNKRNEALALANLGCLGLSIGAPILAKSFLVRSL
DIFQGLSESPSDEEHVQALLWLGRSYKDRGGSQEVRLCYEMGLLIAIGAKNLHSQMVVAK
VLSRLYADLLLYGQCIIYYEHCVGLSREMKDKRLEGEYLEILSNLYLSLNTEKSSRKSLD
YTKQSLRISIDLGKRQEESETWLQVGRIYYLIHEDELADMYLQAAVKTALRMNDPRFAMS
IYEEAGDVFFKGHRNRLAALPFFRDGSLPFARSIRDVQSEFRLLSKLSELLLNEGQYEEA
LQYSTLAVQISATTGVRLNERVAYHRLASVYYSMDQYEMAENYYLKALSLSPAVLEHPAD
AQYYTKIYCRLADITLHKLKDAYDAMGYFHLALAAALEGRGDPQTLYIIYMKLVEIHTNH
LPDAELSRGYLQRAQGLKRELAGYTDPTDTETGDTDRASPEGADAKSTSYSNAESGSSDS
GSGSSTLVGSTTTDTSQTITAQRAAASDDIIHQEEADASQSEETDAETVDGGYIQTNHTD
AGVVRTEF
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctgctgctgccgtccacctccgtgcctgagaaactgcttcttgttttcagac
atatcgaccgctgagctcgatgccttatggaacgagcccccgtacacactaacgggagcc
aatgagctatttccaggaaatgatgtcatggccactggaagtgatgaggaagtggagacg
gaagctgaggtggagacagatgggatcactggtgagagttactggaggaagagggaggcg
tttaacggcagcagcgtctctctcgccgtaggagaacgcttctcttcagatgtgattctg
gtgttcagtggaaagaggaggtccagtattgagcctgatactcacctgcaggaggcgcta
cggacccggctaagagtcgtggagagcaacagccaagatgtcatccagctatttaaggat
ctgtcagcgcgtctggtttcagtacatgctgaaaaagactgcttcgttatcacctttaaa
actgtggaggaaatctggaagttctccacttacctggctctggggtatgtggcgaggtgt
ctggagaacttcctgtgtgatcagtcgttctggctggaccctgtgctgctcagtgatgtg
gagatctgtgtgacggtggatgaggaacacctggccacgctttacctggggctcctgctg
caggagggttcattctttgctaaagctttgctgaacagtgagggaacacaggaggaggag
gaggagctggtctacaggaagaatgacctggtgatggtgaaggatattggacagcagggc
gtgtgggagggaacactactgtctactgggcatcatggcctggtgcctgttcacgccatg
cagcccctgccctaccctttctaccagtggtttctcagaaagtacccaggaaatgcagga
ggagcgatatccacaaaaggtctattcaaccagcctatggtaacgggcacctgtgtggca
gtggtggatcatttcccaatggttaaagacgagctacacttcagtcagggagatctgata
gaggtggagggctttctcatcagctccctgaacatcttcataggaagacaccattccagt
ggacacagaggatttgtccataaggcccacgtgaaaccagagagcgtaaaaccactcagc
agacaattggtctttctgagtgaggaggagagggtggctctgtcgcagtttaacccctgc
catgaccagaaccacagagacctgctggacaagctcttctccaccgacatcagcactgtg
tacagattagatagactggaagactcggatttcacgtacatcagaaacagatccaagcaa
gaacaaaaaaacccagtggacgccagaaagagcaccatttctgagaagagcgaaacccca
ccctaccactcctcgccacgtccttccttctactcttcccaaactcacctcggcagggag
caggaggcgttctccttcagtttggacgacaccttccgagagatggacgaatttgaggag
gatccgccaaactacatggacgacagcgtctgggaaacggaagatgcggagtttgttgac
cccttgttgactctcttgaacctggagaacttccaggacactttccagtcactttacgac
ctctcctactccttcctggacacggtctttggtggtcttccggaggacgaggtgctgctg
catctggagagtttgcgggagggggccaagaaaggcaggatgctgtgggctcaccggaga
gcatgcttccttctgggcaggctttgcgccaagaagctcaagtactcgcaggctcgagta
tattttgaggaggccttgaaggttactgtagagggttttgacgatacacctctgctgatc
gctttgtacactaaccttactgccgtttacctgaagcaaaagatggcggataaacttccg
tatatactggagaaagccagtgctcttattttgtgccttccttgccatgaattctgctct
ctggatgaatttgagttgctcaagcccattttacgcaaatccgtagttgataacgataag
caccttgaggcacggacttgctacctcatcctttgcctcttcctgcagttgaggaagttc
gaggaggccttaccttttgtcgagagactccaattcctgactatcactctttctgctgag
gaagagaggccaattggaccaatagacttcaactggatgctctgcagactctacaacaag
aagtatcttccctttcttgctctagcctctctaagtctggactcaggtcaagaccactct
ctggaagacgccttccaaaagattgatctcttcatcaaaaactcattcaggttgaatcct
cgatggagggacggcaccactctgcttccagcccaagtcgtggtctacttacaacaggcg
ttatccatcgccaaccaaggagaggacctgaagacgcaaagagacttgtgcctctgtctt
gccagtgtgtaccaacagtatggatccttggaaaaagcagtacccttcgctcggcaggct
gtgcaaactgggcgaaacattaacgaagaggagggcttcgaggcgtcggtgcttttggct
tggctcctggtccttacaggagatccagaagctgcccaatctactctacaacctctcctc
aaatccctaaacgaaacagacagcccaaaccagcgtggtgtcgtccataacctactcgca
ctttgccttcgcaagcaggacagcattacagaagcagcaaagaactttcattgtgctctg
aagatttcgcaagagaatgggaacaagcgtaacgaagcacttgccctggctaacctgggc
tgtttgggactgtcgataggagctccgattcttgctaagagtttcttggtcagatcctta
gacatcttccagggtctctctgagagcccgtcagatgaggagcatgttcaggctctgctg
tggttgggcaggagctacaaggacaggggaggaagtcaggaggtcaggctatgctacgag
atggggctactgattgcaatcggcgccaagaaccttcacagtcagatggtggtggcgaag
gtgctgagccgtctgtacgctgatctgctgctgtacggacagtgcatcatttactacgag
cactgcgtgggtctgtccagagagatgaaggataaacgactggagggagaatacctggag
atcctcagcaacctctacctctcactcaatactgagaagtcctcgaggaagtctctggac
tacactaagcaaagcttgaggatttccatagacctggggaagagacaggaggagtcggag
acgtggctgcaagtgggacgtatctactacctgatccatgaagatgagctggctgacatg
tatctccaggcagcggtgaagacggccctgaggatgaatgatccacgctttgccatgagt
atttatgaagaggctggggacgtcttcttcaaaggacacagaaaccgcctggctgccctg
ccattctttagagatggaagtctgccgtttgcgaggagtattagggatgtgcagtctgag
ttcaggctgttgagtaaactctcggagctgctgctgaatgaaggacagtatgaagaggct
ctgcagtattctacacttgcggtgcagatcagcgccaccactggcgtgcgtctgaatgag
agggtggcgtatcaccggctggcgtcggtgtactacagtatggatcagtatgagatggcg
gagaactactatctgaaggctctgtctctgtcccccgctgtactagagcaccctgcagac
gcccagtactacactaaaatctactgcagactcgctgatataacactccacaaactgaag
gatgcttacgatgcgatgggttatttccacctggccctggcagcagctctggagggccga
ggagaccctcagactctgtacatcatctacatgaagctggtagagatccacaccaaccac
ctgcccgatgccgagctgagccgcgggtacctgcagagagcgcagggtctgaagagggag
ctggccgggtacacagaccctactgatacagagactggagatacggaccgtgccagtcca
gagggcgccgatgccaagtctaccagctactctaatgcagagtcgggcagctcggactcg
ggcagcgggagcagcaccctcgtcggctctaccaccacagataccagccagacaatcacc
gcccagagagcggctgcttctgacgacatcattcaccaagaggaagcagacgccagccaa
tcagaagagactgatgctgaaacggtggatggcggatacattcaaaccaaccacacagat
gctggcgtagtacgaacagagttctga
DBGET
integrated database retrieval system
