Astyanax mexicanus (Mexican tetra): 103043302
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Entry
103043302 CDS
T05042
Symbol
grin3ba
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04020
Calcium signaling pathway
amex04080
Neuroactive ligand-receptor interaction
amex04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
103043302 (grin3ba)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
103043302 (grin3ba)
04082 Neuroactive ligand signaling
103043302 (grin3ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amex04040
]
103043302 (grin3ba)
Ion channels [BR:
amex04040
]
Ligand-gated channels
Glutamate (ionotropic)
103043302 (grin3ba)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
PrmC_N
Motif
Other DBs
NCBI-GeneID:
103043302
NCBI-ProteinID:
XP_022524645
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All DBs
Position
18:complement(42023407..42173390)
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AA seq
1151 aa
AA seq
DB search
MNSPSSSVFLLLSSLSLLLLLLLAPPCCQAHPEPCHLLARVGHTLRLGALLPTRQPARVQ
AALGRALLHLQNSPAALLPYNLSVEVVWAGPRRAGDPETALRCVCEELVVNGVSAVLAFP
QGREELLQVEFMATFLEIPFVSIIEQGEPIRTQNRYHLQMTTRVPPSGLADLLLAVLVRE
GWQGGAAVLCPGSGDAEILEHLRWRGRTGLDGAHWHLWETLNLSRSQRAAESREEVDNEK
EEEVTELLSQLLSRTPSALSSSVLLFGSDPECVATVLRGASHLSLTLHPTHWIMGFPLSL
DALHSIGSPLGLLAYGEVNRKPLNFYIRDALQLIGRAVFAATSVRPDLALVQNVVSCFEK
PNKHEGPSSGQYLSRFLSNTSFDGLTGHIQVQGWHSRVSTTQRFHIWSLQRDAMGQPSWV
TVAGYQAGRLEVEEQGLWPGVTQRVSDESPGIRPGGRWQPGLPVAGSRLRVVTLVEHPFV
FTREVDDEGQCPAGQLCLDPHTNSSDVLNQLFRELEQANNGSSGSGGSSSGSSSSSIPSE
IRKCCYGYCIDLLEKLAEDMQFEFDLYIVGDGKYGAWKGGEWTGLVGDLLRGAADMAVTS
FSINSARSRVIDFTSPFFSTSLGILVRSKDTAAPIGAFMWPLHWSMWVGIFVALHITALF
LTLYEWNSPFGMTPHGRNRVRVFSYSSALNLCYAILFGRTVASKTPKCWTGRFLMNLWAI
FCLLVLSSYTANLAAVMVGEKTFEEVSGIHDAKLHHPSLGFRFGTVRESSAEDYMKKSFP
EMHEYMRRFNKPTTPEGVSTLKTDPAQLDAFIMDKALLDYEVSIDADCKLLTVGKPFAIE
GYGIGLPQNSPLTRNVSEYVSRYKSDGYMDMLHDKWYKVVPCGKRVFAVTETLQMGIQHF
SGLFVLLCVGVAGALLTLLGEHAFYRFILPHLRHQHRLRYWLHTSQKIHRALNMTCDEES
KAEEAVADRSPSLCLSENCNLHRVPSVVPSISTSTSSGYSATTRWNNESLKAEPKDANHK
RVHFNLETLNSYRLEHSRRGLVGSPPTQLCANGGPSPGLSLVLSPPSGSSGRPASPWELE
LQELQVRIEEFRHQLRAALARRAELQRTLEKERQNRTEGQKSGVPNTIPTGHSLNPSTAS
NMATKDINKRR
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgaactctccctcctccagtgtcttcctcctcctctcctccctctctctcctcctcctc
ctcctcctggcgcctccttgctgtcaagcccacccggagccctgccaccttctggcgcgc
gtggggcacacgctccgcctgggcgcgctcctgcccacccgccagccggcccgtgtgcag
gcggcgctgggccgggcgctgctgcacctgcagaactcccccgccgccctgctgccctac
aacctgagcgtggaggtggtgtgggcagggccgcggcgggcgggcgaccccgagacggcg
ctcaggtgcgtgtgtgaggagctggtggtgaacggggtctccgccgtgctggcgttcccg
caggggcgcgaggagctcctgcaggtggagttcatggccaccttcctggagattcccttc
gtcagcatcatcgagcagggagagccaatcaggacacagaaccgttaccacctgcagatg
acgacacgtgtgcccccttctggcctggctgatctcctgctggcggtgctggtgagggag
gggtggcaggggggcgctgctgtcctctgtccaggttctggtgatgctgagatactggag
catctccggtggcggggcagaaccggtctggacggggcgcactggcacctctgggagacc
ctcaacctctcccgctcccagagggcggcagagagccgggaggaagtggataacgagaaa
gaggaagaggtgaccgagctcctctcccagctcctgagccggaccccctcggccctgtcc
tccagcgtcctgctcttcggctcggaccccgagtgcgtggccaccgtcctgcggggggcg
tcccacctcagcctgaccctgcaccccacccactggatcatgggcttccccctcagcctg
gacgccctgcactccatcggctctcccctcggcctgctggcgtacggcgaggtcaaccgc
aaaccgctcaacttctacatccgggacgctctgcagctgattggccgagctgtgttcgcc
gccacctcggtccgtcccgacctggcgctcgtccagaacgtggtcagctgctttgagaag
cccaataagcatgaagggccctcctccggacagtacctgtccagattcctgtccaacacg
tcgtttgatggtttgacgggtcacatccaggttcagggttggcattccagagtctcgacc
acccagcgcttccacatttggagcctgcagagggacgcgatgggtcaaccaagttgggtg
accgtggctggctatcaggccggccgtctggaagtggaggagcagggtctttggcccgga
gtgacccagcgagtgtcggacgaaagcccgggaatccgtcccggaggccgctggcagccc
ggacttccggtggctggcagccgactccgcgttgtgactttagtggagcatccgttcgtt
tttaccagggaagtggacgacgagggtcagtgtcctgctggccagttgtgtttggaccct
cataccaacagctcggatgttttaaaccagcttttccgggagttggaacaagccaacaat
ggaagcagtggtagcggtggcagcagtagtggcagcagtagcagctccattccctcggaa
attcgtaagtgctgctacgggtactgcattgacctgctggagaagctggcggaggacatg
cagtttgagtttgatctgtacatcgttggcgacggtaaatacggggcgtggaaaggcgga
gaatggaccggtctcgtgggggatctgctcagaggagcggcagacatggccgtcaccagc
ttcagcatcaactcggcacggagcagagtcatagacttcaccagccccttcttctccacc
agcctgggcatcctggtgaggagtaaggacacggcggcccccatcggagcattcatgtgg
cccctgcactggtccatgtgggtgggaatattcgtggcgcttcatataacagctctcttc
ctcacgctgtacgagtggaacagtccgttcggtatgacgccacacggacggaaccgagtc
cgagtgttctcctactcgtcagcgctgaacctctgctacgccatcctgttcggccggact
gtggccagcaaaacgcccaagtgctggactgggcgcttcctcatgaacctgtgggctatt
ttttgcctgctggtgctgtccagctacacggccaatctggcggcggtcatggtgggagaa
aaaacctttgaagaggtttcgggaatccatgatgccaagctccaccacccgtcactgggg
ttccggttcggaacggtgcgggagagcagtgctgaggattatatgaagaaaagtttcccc
gagatgcacgagtacatgagacgcttcaacaagcccaccacacctgaaggggtctccact
ctcaagacagatccagctcagttggacgcgttcatcatggataaagccctgctggactac
gaggtttctatagacgctgactgtaaactgctgaccgtaggaaagcccttcgctattgaa
ggttacgggatcggcttgccgcagaactctcctctgacccgtaatgtatcggagtacgtt
agccgctataagtctgacggctacatggacatgctccacgataaatggtataaagtggtc
ccgtgtgggaagagggtcttcgctgtgacagagactctgcagatgggtattcagcatttc
tctgggctgttcgtgttgctgtgtgtgggcgtggccggggcgttactcaccctgctggga
gaacacgccttctaccggttcatcctcccccacctgcgccaccagcacaggctcaggtac
tggctccacaccagccagaagattcaccgggcgttaaacatgacgtgtgatgaggagagt
aaagcagaagaagccgtcgcagacagaagcccctccttgtgtctgtcagaaaactgtaac
ctccaccgtgtgccatccgtcgtaccctccatctccacctccacctccagcggctacagc
gccaccaccaggtggaacaacgaaagcctcaaggccgagcccaaagacgccaaccacaag
cgcgtccacttcaacctggagaccctcaacagctaccggctggagcacagccggagggga
ttggtgggcagcccccccacccagctgtgtgccaatggaggtccatctcctggcctcagc
ctggttctgtccccaccgtctggatcttctgggcgacccgcttctccttgggaattagag
ctccaggaactccaggtgaggattgaggagttccgtcaccagcttagagctgccctggcc
aggagagcagagctccaaaggactctggagaaagagagacagaaccggaccgagggtcag
aaaagtggggttcctaataccatccctactggacactctctgaacccatccactgcctcc
aacatggcaaccaaggacatcaataagagaagatga
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