Astyanax mexicanus (Mexican tetra): 103043305
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Entry
103043305 CDS
T05042
Symbol
pus1
Name
(RefSeq) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amex03016
]
103043305 (pus1)
Enzymes [BR:
amex01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
103043305 (pus1)
Transfer RNA biogenesis [BR:
amex03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
103043305 (pus1)
Prokaryotic type
103043305 (pus1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
103043305
NCBI-ProteinID:
XP_007246111
Ensembl:
ENSAMXG00000008710
UniProt:
A0A8B9HCX1
LinkDB
All DBs
Position
17:complement(40818863..40826772)
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AA seq
431 aa
AA seq
DB search
MLRFIQQLHLFSSSSSPCFKPALTTRGCIQSEKLSVLLEKCRRRTMMMPAEEQNSPQITV
LKRAPDSPGEENDHQVKKLKTDDDQTSDEKRFPKRKVVLLMAYSGKGYYGMQRNCGNSQF
KTIEDELVTALIKAGCIPENHGDDMKKMSFQRCARTDKGVSAAGQVVSLKLWLIEDILQK
INKQLPSQIRVLGFKRVTGGFNSKNNCDARTYSYMLPTVAFSPKDHNQEDKSFRLDAETL
QKVNRLFNLYKGTHNFHNFTSQKGPRDPSAKRYITHMSCGEPFIRKDVEFAEITVRGQSF
MMHQIRKMIGLVIAVVKGYAGEQIIERSWGEEKVDVPKAPGLGLVLERVHFDRYNKRFGG
DGLHETLEWTQEEDAIAAFKDAHIYPSIVETECQEKSMVSWMATLPIHDFEATETGKQEN
KDDDEDGNASD
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggtttatccagcagcttcatctcttctccagcagcagcagcccgtgctttaaa
ccagctctcacaacccgaggttgcatccagtcagaaaagctcagtgttctcctggagaag
tgcaggaggaggacgatgatgatgccagcagaggagcagaactcccctcagatcaccgtg
ctgaaaagagcaccagacagccctggtgaggagaatgatcaccaggttaagaagctgaaa
acagatgatgaccagacttctgacgagaagaggttcccgaagaggaaggtcgtcctcctc
atggcgtattctggaaaagggtattatggaatgcagagaaattgtggtaactcacagttt
aaaaccatagaagatgaacttgtgaccgctcttattaaagctggatgcatccctgagaac
catggtgacgatatgaaaaagatgtctttccagagatgtgcaaggactgacaagggtgtt
tctgcagctggtcaggttgtctctctaaagctgtggttgattgaagacattctgcagaag
attaacaagcagctcccatcacagatcagagttttaggattcaagagagtcacaggaggc
tttaactccaaaaacaactgtgacgccagaacctattcctacatgctgcctactgttgct
ttctctccgaaagaccacaaccaggaggacaagtccttccgcttggacgcagaaaccctt
cagaaggtcaacaggctgttcaatctttacaaaggaacccacaacttccacaactttacc
tcacagaagggtccgcgggaccccagtgccaaacgctacatcacccacatgtcctgcggg
gaacctttcataagaaaggatgttgagtttgcggagataactgtgcgagggcagagcttt
atgatgcaccagatcaggaagatgattgggctggtgatcgcggtggtaaagggatatgcg
ggagagcagatcatcgagagaagctggggggaggagaaagttgacgtgcccaaggcgcct
gggctcggcctggtgctggagagggtgcactttgaccgctacaacaagcgctttggagga
gatggtcttcacgagaccctggagtggacccaagaagaagacgccattgctgcctttaag
gatgcccacatataccccagtatagtggagactgagtgtcaggagaagtccatggtcagc
tggatggctacgctgcccattcatgacttcgaggccactgaaacgggcaagcaggaaaac
aaggacgacgatgaagatgggaacgcttctgattga
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