Astyanax mexicanus (Mexican tetra): 103043373
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Entry
103043373 CDS
T05042
Symbol
slco1c1
Name
(RefSeq) solute carrier organic anion transporter family member 1C1 isoform X1
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
103043373 (slco1c1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amex02000
]
103043373 (slco1c1)
Transporters [BR:
amex02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
103043373 (slco1c1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Kazal_1
Motif
Other DBs
NCBI-GeneID:
103043373
NCBI-ProteinID:
XP_007238223
Ensembl:
ENSAMXG00000004306
UniProt:
A0A8B9GP86
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All DBs
Position
2:complement(29898550..29944265)
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AA seq
713 aa
AA seq
DB search
MARNFIRETLAKENETFLRRMEIPNKDSWSPENEPTSVRRHPFCSSLKMFLVALSFAYFS
KALSGSYMKSTITQLERRFDIPSYLIGVIDGSFEIGNLLVIAFVSYFGAKLHRPKIIALG
CLLMSLGTFLIALPHFIIGRYKFETSVRSSANSTNNLTLCPTSVLVGNHSSTLSSTGCEN
ESRLSMWIYVLLGNILRGIGETPVQPLGISYIDDHALDDNAAFYIGCVQTISVIGPVFGY
LLGSLCAKIYVDIGFVNMESISITPGDARWVGAWWLGYLIAGLITLISAVPFWFFPKSLP
VPEGRLAKCSPERTSFIKDSPGLDHKYQADEQFSFVRLAKEFLPTLRSLLGNPVYILYLC
VTVIQFNSLIGMVTYKPKYIEQHYGQSASKANFLMGVINIPAVALGMFSGGVLMKKLKLS
IMGAAKFALGTSLLGYFLSLFFFAMGCENAKVAGITVSYEGTESLSHQNSTLFVKCNAHC
ECSKTEWDPVCGENGLTYVSPCLAGCRMSRGSGVDTVFEQCNCVAGGNLTAYVGHCRHRE
SCQRVFPYFLALCVITSFIISLGGTPGYMLLIRCIRPQLKSLALGFHTLTTRTLAGIPAP
IYFGAIIDTACLKWGHKKCGGKGACRIYNTTAYRIAYLGLTLGLRTASFFLCALGLVVLQ
RHIKRQENGTLSNGNTGHTVAELQALRKEETHNSHSDQSPRTSDYDPERETRL
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaaatttcattagagaaaccttagccaaggaaaatgaaacgtttttaaggagg
atggaaataccaaacaaggacagctggtcgcctgaaaatgagcctacgtcagtgagacgg
caccctttctgttccagtctaaagatgttccttgtagccttgtcctttgcctacttttca
aaggctttatctggaagctatatgaaaagcacaataactcagctggagaggcgctttgac
atccccagttacttaataggagtcattgatggaagctttgaaataggtaacttgttggtt
atcgcctttgtcagttactttggtgccaagcttcaccgaccaaagatcattgccttgggc
tgtctgctgatgtcattagggacattcttaatagcactccctcattttattattggaaga
tacaagtttgaaacatcagtgagatcgtcagcgaactcaacaaacaacctcactttatgt
ccaaccagtgtgcttgtgggtaatcattcctctacactttcaagcacaggctgtgagaat
gagtccaggttatccatgtggatctatgtgttactgggaaacatcctccgtgggattggt
gagaccccagtacagcctttgggaatttcttatatagatgatcatgctctggacgacaat
gcagcgttctacattgggtgtgttcagacgatatcggtcataggtccagtgtttggttat
ctgcttggatccctttgtgcaaagatatatgtggacattggatttgtaaacatggagagc
attagcattacaccaggagatgcacgctgggtaggagcgtggtggttgggataccttata
gcagggctcatcaccctcatatcagccgtgcccttctggttctttcccaagtccctgccc
gtgccagagggacgactggccaagtgctctcctgagcggaccagcttcatcaaggactct
cctggactggaccacaagtatcaggcagatgaacaattcagtttcgtaagactggccaaa
gagtttttgccaacactgagatctctcctggggaatccagtctacattttatacctctgt
gttactgtcatccagtttaattctttgataggaatggtgacatacaaaccaaaatacata
gaacaacactatggacagtcagcatccaaagctaacttcttaatgggggtaatcaacatc
ccagctgttgcattgggaatgttctcagggggtgtgcttatgaagaagctcaagctgagc
atcatgggagcagccaagtttgcactaggaacatctctgttgggctactttctgtctttg
ttcttctttgccatgggttgtgagaatgccaaagtggctggcatcactgtgtcatatgaa
ggaacggagagtctctctcatcagaacagcacactctttgtgaagtgtaatgcacactgt
gagtgctcaaaaacagaatgggacccagtgtgtggtgagaatgggctcacatatgtctca
ccatgcctggctgggtgccggatgtctcgtggctctggagtagacacagtgtttgagcag
tgtaactgcgtggcaggaggaaacctaacagcatacgtgggtcactgcagacacagagag
agctgccagagagtcttcccctacttcttagctctgtgtgtcatcacttcctttattatc
tccctgggtggaacaccaggatacatgctactcatccgatgcatcaggccacagctgaag
tctttagctttaggatttcacaccctgacaacacgcactctcgctggcatcccagctccg
atctactttggggcaatcattgacactgcctgtctaaaatggggccataagaagtgtggt
ggaaaaggagcgtgtagaatctacaacacaactgcctacaggatagcatatctgggctta
acactgggcctgaggacagcctccttcttcctgtgcgctctgggtctggtggtcttacag
cggcacatcaaaaggcaggagaacggcacactttctaacggcaacactggacacactgtt
gcagaactgcaagcacttagaaaagaggaaacccataactcacactcagaccagtcccca
cggacctcagactatgaccctgagcgggagacgcgcctgtga
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