Astyanax mexicanus (Mexican tetra): 103043396
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Entry
103043396 CDS
T05042
Symbol
cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103043396 (cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103043396 (cnot2)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103043396 (cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103043396 (cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
103043396
NCBI-ProteinID:
XP_007246649
Ensembl:
ENSAMXG00000000972
UniProt:
A0A8T2MA30
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All DBs
Position
2:complement(54381330..54391879)
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AA seq
530 aa
AA seq
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MALHGLVTNGMFSATRKKFEGVESDYPDESMYYGQPSMFPHRTEKDMLASPSPSSSGQLS
QLGASLYGPQSALGFSIRGMNNNNPQLNRSLTQGTQLPSHNTPTTGVPTMSLHTPPSPNR
GILPMNTRNIMNHSQVGQGMSMSGRTNSMGSSGLGSPNRSSPSIICMPKQQPARQQPFTI
NSMSGFGMGRSQGFGMNSLSNNIFNGTDGSENVTGLDLSDFPALADRSRREGNGNPTPLH
NPLTGRAPYVGMVTKPSTEQSQDFSIHNEDFPALPGPNYKDPTLSTDESKSNLNSSTKSS
SSADGPKFPGDKTSAQNNNQQKKGIQVLPDGKVTNIPSGMVTDQFGMIGLLAFIRAAETD
PGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRDK
LAAIKLARYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTLK
TNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHVPTTFNYNPAQQAF
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggctttacacggactcgtgacgaacggaatgttcagtgctacaagaaagaagtttgag
ggggtcgaaagcgactacccagatgagagcatgtactatggtcagccttcgatgtttcct
catcgaacagagaaagatatgctggcatctccctcaccatcgtcgtcaggtcaattgtcg
cagcttggtgcaagtttgtatggtccacaaagtgcactaggcttctcaataaggggcatg
aacaacaacaaccctcagttaaaccggagtttaacacaaggtactcagttaccgagccat
aacaccccaacaacgggcgtcccaacgatgtccctccataccccaccttcgccgaacagg
ggaattcttcccatgaataccaggaacattatgaatcactcgcaggtgggtcagggcatg
agcatgagtggcaggaccaacagtatgggcagttcgggccttggcagccccaaccgcagc
tctcccagcatcatctgcatgccaaagcagcaaccagcacgacagcaacctttcaccatc
aacagtatgtcaggttttggaatggggcgaagtcaagggtttggtatgaactctttatcg
aacaacatcttcaatgggacagacggaagtgaaaacgtgactggactggacctctcggac
ttcccagcgttagcagacagaagtcggagggaaggaaatggcaacccaacaccgttgcat
aatcccctgactggaagggctccctatgttgggatggtcacaaagccatcgactgagcag
tcgcaagatttctcgattcacaacgaagactttcctgcactgccggggcctaactacaag
gatccaacgctgagcacggacgaaagcaaatcaaacttgaactcatcaaccaagagcagc
tccagtgcagatggccccaagttcccaggtgataaaacatcagcacagaacaacaaccag
cagaagaaggggatccaggtcttgcctgatggcaaagttacaaacattccttcaggaatg
gtgacggaccagtttggaatgattgggctcctagctttcatccgagcagctgagacagat
cccggcatggttcatctggcattgggaagcgacctgactacactgggactcaatctcaat
tctcccgagaatctgtatcctaagtttgcatctccgtgggcttctgcaccatgtcgacca
caggatattgacttccatgttccctctgagtacctaaccaacattcatataagggacaag
ctggctgcaataaaactggcacgttatggagaggacttgctgttctacctctactacatg
aatggaggagatctcttacagcttctggctgctgtggaactcttcaaccgagactggagg
taccataaggaggagagggtgtggattacacgagcacctggcatggaacccaccctgaag
accaacacctatgagagagggacatactacttctttgattgtcttaactggaggaaggta
gctaaggagtttcaccttgaatatgacaagcttgaggagcggcctcatgtgccaaccacc
ttcaactacaacccggcccagcaggccttctga
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