Astyanax mexicanus (Mexican tetra): 103043413
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Entry
103043413 CDS
T05042
Symbol
nr1h5
Name
(RefSeq) nuclear receptor subfamily 1, group H, member 5 isoform X3
KO
K08538
farnesoid X receptor beta
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103043413 (nr1h5)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
amex03310
]
103043413 (nr1h5)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
103043413 (nr1h5)
Nuclear receptors [BR:
amex03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
103043413 (nr1h5)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
103043413
NCBI-ProteinID:
XP_022526331
Ensembl:
ENSAMXG00000012228
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All DBs
Position
12:2204725..2235973
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AA seq
497 aa
AA seq
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MREWTDHDMGVAPGGYLSGVDAYGISEPLQYYDVLVDPLGYPYQDPDLQCFSYGQQHYSP
PNVQLSMYTPPGSQPCNPPYPYSPQCPEPPCEADMDLHAQVRGGVGVTPLMKRPRLGPGA
RVKGQDELCVVCGDRASGYHYNALTCEGCKGFFRRSVTKKAVYRCKSGGGCEMDMYMRRK
CQDCRLRKCRAVGMLAECLLTEVQCQSKRLRKGAKHRGDSLSRLTAEDEENSESRNVSST
SRLPPTTRVSLGLSREQKCVLNRIVEAYRRYRAHDSLHFRVPQWSGLDDGGDRLADLTPF
QTEKLLQFSKSVPGFELLDDADQSILLSCSSMEVMFLLSAQQFAENPSAFSAALYPGSLS
SVSPHCWMKTSQSKNNNNNNSGHEVILNSAGLSEELLGPVLNFFHSMAAIAVTEAEYALL
TATAVLCSDRPSLRAVRCVENLQEFVLDLLSKVCRNGDGAAVGPCRFARLLGRLTELRTL
RHNHLTLLPQQPWDLQH
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgagggagtggacggatcatgatatgggcgtggcgcctggaggttacctgtcaggtgta
gacgcctacggcatttcagaacctctgcagtattacgatgttctggtggacccgctgggg
tacccgtatcaggacccggacctgcagtgtttttcctacgggcagcagcactacagcccc
cccaacgtccagctctccatgtacacaccccccggctctcagccctgtaaccccccctac
ccctatagcccgcagtgccccgagcccccctgtgaagcagatatggatctccacgctcag
gtccgaggcggtgtgggcgtgacgcccctcatgaagcggccccggctgggccccggggcc
cgagtgaagggtcaggatgagctgtgtgtggtatgtggagacagagcttcaggatatcac
tacaacgctctgacctgtgaaggctgcaaaggtttcttcagacgcagtgtaacgaagaag
gccgtgtaccgctgtaagagcggcggcggctgcgagatggacatgtacatgcgccgcaag
tgccaggactgccggctgcgcaaatgcagagctgtggggatgctcgccgagtgtctgctg
acggaggtgcagtgtcagtcgaagcgattgaggaagggagccaagcaccgaggagactcg
ctctctcgtctgactgctgaggacgaggagaactcagagagcaggaacgtctcgtctacc
agcagactgcctccaacaacacgggtttctttgggtctttccagagagcagaaatgtgtt
ctgaacagaatcgtggaagcgtatcggagataccgagctcacgacagcctacacttcagg
gttcctcagtggtcaggactggatgacggtggagatcgtctggctgatctgacgcctttc
cagacagaaaagctcctgcagttctctaagagcgtaccaggctttgagctcctggacgat
gctgatcaaagcattctcctgtcctgctcctccatggaggtcatgttcctgctctcggct
caacagtttgccgagaatccgtccgccttcagcgcagctctgtatcctggaagtttatcg
tctgtatctcctcactgctggatgaaaacttcacagtctaaaaacaacaacaacaacaac
agcggccatgaggtcatactaaactcagcagggttgagtgaggagctcctgggaccagtg
ctaaatttcttccacagtatggccgccatcgctgtgactgaggctgaatacgctcttctc
actgctactgccgtgctctgctcagacaggccctctcttcgagcggtacggtgtgtggag
aacctgcaggagtttgttctggatcttctctctaaggtctgcaggaacggcgatggtgcc
gctgtgggtccgtgccgcttcgcccggctgctgggccgactcaccgagctcaggacgctc
cgccacaaccacctcacgctcctaccacagcaaccctgggacctgcagcactga
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