Astyanax mexicanus (Mexican tetra): 103043511
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Entry
103043511 CDS
T05042
Symbol
lingo4b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103043511 (lingo4b)
Membrane trafficking [BR:
amex04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
103043511 (lingo4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
LRR_1
Ig_3
ig
Ig_2
LRR_Zer-1
V-set
LRR_RPS2
LRR_9
LRRNT
LRR_EndoS
C2-set_2
C2-set_3
Motif
Other DBs
NCBI-GeneID:
103043511
NCBI-ProteinID:
XP_007249823
UniProt:
A0A8B9JVI6
LinkDB
All DBs
Position
6:40056447..40074243
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AA seq
607 aa
AA seq
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MFVEVCGQQGVQTLLLLWCLSLSAADLSWPCPQKCTCRQETLEINCSSKHLTNVPEGLPN
NGKRLDLSGNRLKTLGRRQFYGMSKLEDLDLGENIISMIEVEAFQGLKNLKFLRIKNNRL
KIIPVGVFSGLSNLRSLDLSKNEILVFLDYTFQEMGNLREMNAGENDLVFISQRAFVGLQ
SLQELIVDRSNLTSIPTEAFSQLQSLSKMRLRRLTISILPNNAFRRLHQLRTLQILQWPS
LESLNSNSLIGLNLTTLVISNCNLSAVPYAALRHLGYLRYLDLSYNPITSIQGNLLGEML
RLQEFHLAGGSLLRIEPGAFRGLVNFRLLNVSSNRLTTLEESAFHSVGNLETLRLDRNPL
TCDCRLLWVVRRRFRLNFNGRQPSCSSPELVRKREFRDFSDAELPIVFICKQPRIVDRQT
QEASVDEGTHVQFECKADGYPQPSITWLSPHQTQIGSVGRIRVLANGSLELRCAQVQDSG
TYLCTAANPAGNDSISASLQVRSFPRNYTSSYFSDDAWVETSLPPSTNSSAEVSNPYPFD
AKTLVIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHTATIDFVPRSSMGGGGDGADTG
RFTMKLI
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggaggtgtgtggccagcagggggtgcagacactcctgctgctgtggtgtcta
agcttgtcagcagctgatctgtcctggccatgcccacaaaagtgcacctgtcgacaggag
acgttagaaatcaactgctcctcaaaacacttgacaaatgttcctgaaggcctgcctaac
aacggcaagcgcctggatctttccggcaatcgcttaaagactttaggtcggcgacagttc
tatggcatgtccaagctggaggatctggacctaggtgagaacattatatctatgattgag
gtggaggcattccagggtcttaaaaatcttaagttcttacgaatcaaaaacaaccgtcta
aagataatccctgttggcgttttctctggcttgtccaaccttcgcagcttggatctcagt
aaaaatgagatacttgtgtttctggattacacatttcaggaaatgggaaatctgagggaa
atgaacgctggggagaatgacctggtgttcatttcgcagagggcatttgttggcctgcag
agtttacaggaactgattgtggatcgcagtaacctaacctccattcctactgaagctttt
tcacagcttcagagcctgagcaagatgcgtctgcgaagactcacaatcagcatcttgccc
aacaatgccttccgccggctgcaccagctgcgcaccctgcagatccttcagtggccctcc
ctggagagcttaaacagcaacagcctcattggtctcaaccttaccactcttgtcatcagc
aactgcaatctgagtgccgtaccatatgccgccctgcgtcatttgggttacctacgctac
cttgacctctcctacaacccgatcacatctatacagggcaaccttctaggggaaatgctc
agactgcaggagtttcacctggcaggtggaagtcttctgcgcatcgagccaggtgccttc
agaggactggtcaactttcgactactcaatgtatcctcaaatcgactcaccaccctggag
gagagtgccttccactcagtggggaacctagagaccttgaggctggatcgaaaccccctg
acttgtgactgccggcttctgtgggtagtgcgaaggaggtttaggctgaactttaacggt
cgccaaccttcatgttcttcccctgaacttgtgcgaaagagggagttccgtgacttttcg
gatgcagagcttcctatagtgttcatctgcaagcagccacggattgtggaccggcagaca
caggaggcttcagtggatgagggaacacatgtacaatttgaatgcaaagcagatgggtat
ccgcagccttctataacttggctgtctccccatcagactcagattgggtctgtggggaga
ataagagtacttgcaaatggaagtctggagttgcgctgcgctcaggtacaggacagcggt
acctacctttgcactgcagctaatcctgcagggaatgacagtatctctgcaagtcttcag
gtacggagttttcctcgaaactacacaagttcctatttttctgatgacgcctgggttgag
acctcgttgcctccttccaccaactcttcagcagaagtgtcaaacccttacccctttgat
gccaagacccttgttattgccactactatgggcttcctttctttcctgagctcagtggcc
atttgttttgtttttatgttcttctggagccaaagtaaaggccagatcaagcacacagcc
accattgactttgtgccacgttcatctatgggtggagggggtgacggtgcagacactgga
aggtttacaatgaaactcatatga
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