KEGG   Astyanax mexicanus (Mexican tetra): 103043530
Entry
103043530         CDS       T05042                                 
Symbol
sf3b4
Name
(RefSeq) splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103043530 (sf3b4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:amex03041]
    103043530 (sf3b4)
Spliceosome [BR:amex03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    103043530 (sf3b4)
 Complex B
    103043530 (sf3b4)
 Complex C
   U2 SnRNP specific factors
    103043530 (sf3b4)
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB
Other DBs
NCBI-GeneID: 103043530
NCBI-ProteinID: XP_007230857
Ensembl: ENSAMXG00000008282
UniProt: A0A8B9KSB9 W5KLQ3
LinkDB
Position
3:32711194..32714986
AA seq 401 aa
MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVE
FLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTF
SAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK
DSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPTAPTPVMTTLGAAIPIPGMPPP
GAFPPVPPPGSMPPGMPPGMPMPLAPGTPSPQGGATGPPPGPPPFPPAGMHPPGMPPMPM
PPTGPPGMVPPPPGPPGTTRAPPPPGMPPPPQMGMPPRGPFGPPMGPPMHPGMRGPPPPM
PPPGYAGGPPRPPPFGFQRAPPMPPRPPAPPRGPIRAPMPP
NT seq 1206 nt   +upstreamnt  +downstreamnt
atggcggcgggtccgatatcagaaagaaaccaggatgctacggtatatgtaggcggtctg
gatgaaaaggtttcggagccgctgttgtgggaactcttcctgcaagctggaccagtggtc
aacacacacatgcccaaagacagagtcacagggcaacatcagggttatggctttgtggag
ttcctcagtgaggaagatgctgattatgccataaagatcatgaacatgatcaagctgtat
ggtaaaccaatacgagtcaacaaagcttcagcacacaacaagaacttagacgtgggtgcc
aacatcttcatcgggaacttggaccccgaaatcgacgagaagctgctttatgatactttc
agtgctttcggcgtcatccttcagacacccaagattatgcgtgacccggacacaggcaac
tccaagggttacgcttttatcaactttgccagttttgatgcctctgatgctgcaattgaa
gccatgaatggccagtacctctgtaatcgacccatcacagtctcttacgcctttaagaag
gattccaaaggtgagaggcacggctcagcagccgagcgtctcctggctgcacagaaccct
ctctcgcaggctgataggccacatcagctgtttgcagatgccccgccccctcccactgca
cctacgcctgtaatgaccacactgggagcagccattcccattccaggcatgcctcctcct
ggcgcattcccccctgtgccacccccaggctcaatgccacctggaatgccccctggcatg
cccatgccccttgctccagggacaccttcccctcagggcggtgctacaggacctccccca
ggaccaccgcccttcccacctgctggaatgcaccctccaggtatgccacctatgccaatg
ccccctactggaccaccaggtatggtgccaccaccccctggcccccctggtaccactcgg
gcaccgcctccaccaggcatgcctcctcctccacagatgggcatgccccccagaggacca
tttggaccacccatgggtccccctatgcatccaggcatgaggggtccccctcccccaatg
ccacctccgggctatgccggaggaccacccagaccgcctccgtttggtttccagagagca
cctcccatgcccccaagacccccagcaccacccagaggacccatacgtgcacctatgcct
ccttaa

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