Astyanax mexicanus (Mexican tetra): 103043551
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Entry
103043551 CDS
T05042
Symbol
sgca
Name
(RefSeq) alpha-sarcoglycan isoform X1
KO
K12565
alpha-sarcoglycan
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103043551 (sgca)
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Gene cluster
GFIT
Motif
Pfam:
Sarcoglycan_2
Sarcoglycan_2_C
TMEM154
FAM163
CR_prot_dom_plant
DUF3377
Motif
Other DBs
NCBI-GeneID:
103043551
NCBI-ProteinID:
XP_022525015
Ensembl:
ENSAMXG00000030474
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Position
15:9299911..9311930
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AA seq
400 aa
AA seq
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MAGWGDWTLALTVCAAGLLVVQADILTYATVGQLFVHELQREHFQNEFEPFLYGRVFNDP
MVFKCNRQLFPDLPRWLRFTQRHPYDNGFLYGTPLQGDLGKNTVQIFVTNKRSYDTFKER
LVINVGPAVKQMPYQAEFFIGLREIEKVLPSEVQNEIKKDIQMIWGTDKLDYVNITSALD
RGGRVPLPLAGHYEGVYVKLGSDQPYSKCLRRLQTEDHQRECKAGGKIAGDCSVCTIPAN
CVTWCKSVLIDLSRPVPPPPAPTVGSGILAWGGEFNPPDSPPDRDFLPEYIVTVIIPFIL
AIILCLILAYVMCCRREGVQKRDAKTLDIQLYHYHTIHDNSSELRTMADGRSGAPQPRST
LPMFNARTGEKAAPQYPFDSVHIPLIMAQQEPNVDTFPRK
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcaggctggggggactggactttagcactcacagtgtgtgcagctggtctgctggtg
gtccaggccgacattctaacgtacgctactgtaggccagctgtttgtgcacgagctgcag
agggaacatttccagaatgaatttgagcctttcctttacgggagggtgtttaatgacccc
atggtgtttaagtgtaaccggcagctgttcccggatctcccccggtggctgcgcttcacc
cagcgtcacccctacgataacggcttcctgtacggcaccccgctgcagggggacctgggc
aagaacacagtgcagatattcgtgacaaataagcgaagttatgacaccttcaaggagcgg
ctggttataaatgtggggcctgcagtcaaacaaatgccctaccaggctgagttcttcatt
gggctgagggagattgagaaggtgcttccctctgaggttcagaatgagataaagaaggac
attcagatgatctggggcaccgacaagctggactacgtcaacatcacctctgccctggac
cggggcggccgtgtccccctgccgctggctggacactatgagggcgtgtacgtgaagctg
gggtcagaccagccgtactctaagtgcttgcggaggctgcagacggaagatcaccagaga
gagtgtaaagccggcggcaaaatcgctggagactgcagcgtctgcaccatccctgctaac
tgtgtaacctggtgcaaatcagtcttgattgatttgtccagacccgttccccctcctcca
gccccgactgttggttcaggaatcctggcctggggtggcgagtttaacccccccgactct
ccacctgacagagactttttacccgagtacatcgtcactgtaattattccttttattctc
gccatcatcctctgcctcattctggcctatgtgatgtgctgcaggagagaaggagttcag
aaacgagatgccaagaccttagatatccagctgtaccattaccacaccatccatgacaac
agcagtgagctgaggacgatggcggacggtcgctcaggcgctcctcagccccggtccact
ctgcccatgttcaacgctcgcactggagagaaggcggctcctcagtatcccttcgacagc
gtccacatccctctcatcatggcccagcaggagccgaatgtagacacctttcccaggaaa
taa
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