Astyanax mexicanus (Mexican tetra): 103043583
Help
Entry
103043583 CDS
T05042
Name
(RefSeq) cadherin-20
KO
K06807
cadherin 20, type 2
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
amex04515
]
103043583
Cell adhesion molecules [BR:
amex04515
]
Cadherins
Major cadherins
103043583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
103043583
NCBI-ProteinID:
XP_022524856
Ensembl:
ENSAMXG00000018286
LinkDB
All DBs
Position
15:complement(19718686..19744905)
Genome browser
AA seq
793 aa
AA seq
DB search
MASVLLSRRTFTMILMVLLLLNLKEVLLEDQVENNLKVKSLSRVKRGWVWNQFFVLEEYT
EQKPLYIGKLHSDMDIGDGSTRYTLSGEGAGNTFTLDDSTGDIHAIKRLDREVKAQYVLR
AQALNRETGRPLEPESEFIVKIQDINDNEPKFLDGPYRATIPEMSPVGTFVIQVTAVDAD
DPSYGSSARLAYSIIEGQPYFSVDAKTGEVHVSLPDMDREVREQYQLVIQAKDMEGQLGG
LAGTATVNITLSDINDNPPKFTQQLYKMSVLESSPVGSVVGQIQAKDRDVGINAEMKYSI
IGGDGQDFFDISTDVSNLYAIITVKKKLDFETKHSYTLKVEGSNTHFDSRFKTKDPLSDV
TTVHVSVEDVDEAPEFDSQFYYVEVPEDAEIGTVFKTVSARDPDTANNTIRYSIERKSDP
EKCFYMDVSNGSLMTALPLDREKASWHNLTVLAMEMNNPSKIGSVFVAIRVLDVNDNPPS
LMQYYGTFVCENAKAGQLIQTVTAVDPDEPTGGQHFHYSLAPEAANNPNFTLRDNQDNSA
WLLTRRGGWSVQTQSVYYLPILVSDGDQPAQSSTSTLTVRVCSCDSDGEVLSCDAEAYTM
PANLSQAALIAILACAFVLIVMIILTLSLRSQSKKPYFTKEEEHLHENIVRYDDEGGGEE
DTEAFDIYALWSPRVEPLANYHKLRQDMLPEDKSLSRHVPQHCVTEVGEDSSNIHSYVEA
KLYKADSDTCAPPYDSLQTYAYEGEGSIAGSLSSLQSQTSHTDHEYDYLNEWGPRFLKLA
EMYGVSNNHSPMW
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgtgttactgagcagaagaacttttaccatgatcctgatggtactgttgttg
ttaaaccttaaagaggtcctgctggaagatcaagtggagaacaatctgaaagtgaaatct
ttgagcagagtgaagagaggatgggtttggaaccagttctttgttctcgaggagtacact
gaacagaaacctctgtacatcggaaagcttcactcggacatggatattggggatggctcc
actaggtataccctgtctggtgaaggtgcgggtaatacttttactctggacgacagcaca
ggtgatatccatgccatcaagaggctagaccgtgaggtgaaggcccaatatgttctccga
gctcaagccctgaaccgcgagacggggcgtccgctagagcctgagtcagagttcattgtg
aagattcaggacatcaatgataatgagccaaaatttctggatggaccttatagagcaact
attcccgagatgtcaccagttggcacatttgtgatccaggtgacagctgtagatgctgat
gacccatcatatggtagcagtgcacgtttggcgtatagtattattgaaggacagccatac
ttctctgtggatgcaaaaacaggtgaagtgcatgtgtctctgcctgacatggaccgtgag
gtcagagagcagtaccagctggttattcaggctaaagatatggagggtcaactgggtggt
ctggcaggaacagccacggtcaacatcacactcagcgacatcaacgacaacccacccaaa
ttcactcagcagctgtacaaaatgagtgttttagagtcaagtccagtaggatcagtggtg
ggacaaatccaagctaaagaccgtgatgttggcattaatgcggaaatgaaatacagcatt
atcggaggagacggacaagacttcttcgacattagcactgatgttagcaacctgtatgcc
atcatcactgttaaaaagaaattggacttcgagacgaaacatagctacactcttaaggtg
gaaggatctaatactcattttgactcgcgctttaagactaaagatccactcagtgatgtg
acgactgtccatgtgagtgtggaggatgtggatgaagctccagagtttgattctcagttt
tactatgtagaagttcctgaagatgctgaaatcggaacagtgtttaaaaccgtctctgcc
agggatccagacactgcaaacaacactataaggtattccatagagcgtaagagtgatcct
gaaaagtgcttttatatggacgtttctaacggctctctgatgacagcgttacctctggac
agagaaaaagccagctggcacaaccttactgtgttagctatggagatgaataacccttca
aagattggcagtgtattcgttgctataagggtcctagacgtaaatgataacccaccatca
ctgatgcagtactatgggacgtttgtgtgtgaaaatgcaaaagcaggacaactgattcag
acagtaacagctgtagatccagacgagcccacagggggacagcatttccactacagttta
gccccagaagctgctaataatcccaacttcactctgcgagataatcaagataactcagct
tggcttttaacccggcgtggtggctggtcagttcagacgcagagtgtgtattatttgccc
attctggtgtctgatggagatcagcctgctcagtccagcaccagcacactaaccgtacgt
gtgtgcagctgtgactcagatggagaggttctatcctgtgatgctgaagcctacacgatg
ccagccaacctgagccaagctgcacttatagccatcctcgcctgcgccttcgtattgatt
gtgatgatcattctgacgttgtccctgcggagccaaagcaaaaagccttacttcaccaaa
gaggaggaacatctgcacgagaacattgtgcgttatgatgacgagggtggaggagaggag
gacactgaggcttttgatatttatgctctatggagccctcgtgtggaaccactagcaaac
tatcataaactgcggcaggacatgctacctgaggacaagagcctttcccgacatgtccct
cagcactgcgttacggaagtgggggaagacagctctaacattcacagctacgtggaggct
aaactctacaaagccgattcagacacttgcgccccaccgtatgattcccttcagacatac
gcatacgaaggtgaaggatctatagcgggatccctgagctccctgcagtctcagacttca
catactgaccatgaatatgactacctaaacgagtgggggccacggtttcttaaactagcg
gaaatgtacggtgtcagcaacaatcacagcccgatgtggtag
DBGET
integrated database retrieval system
