Astyanax mexicanus (Mexican tetra): 103043625
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Entry
103043625 CDS
T05042
Symbol
samd1a
Name
(RefSeq) sterile alpha motif domain containing 1a isoform X1
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103043625 (samd1a)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
103043625 (samd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_WH
SAM_1
SAM_PNT
SAM_2
Motif
Other DBs
NCBI-GeneID:
103043625
NCBI-ProteinID:
XP_022523767
Ensembl:
ENSAMXG00000043634
LinkDB
All DBs
Position
3:5713757..5730357
Genome browser
AA seq
410 aa
AA seq
DB search
MSEPRYREWILDTIDSLRSRKARPDLERICRMVRRRHGSEPDRTCVELEKLIQEHAVLKV
NYKGSVSYRNAAKVQRGRRKVEQASPGKSPAKRVCLADVRRDAGGGGDDAATLGPADEEA
MEDGEVRERRDGVEGVEEDELSTTAGLDSSMDEEEASLDAPCMQNTTDSGIGLSPITDPG
ASLPATSPTPSKSSPNHSSLELERDPLHAPAEHTPPSSQQDTGSPELELARQPAAICPSA
QRSALTGEEGPRVEENALTPDQLLSDCRASLQHQDEAVGSDREPAQGSVPTEEGKNCSNE
GNVASPQEIEQAKNGGGIKRADSVKSEEITQDPLLWSVSDVVSYFTAVGFPEQAVAFRTQ
EIDGKSLLLMQRSDVLTGLSIRLGPALKIYEHHVKVLQRSHFQDDSDVMS
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagccgcggtaccgcgagtggatcctggacacgatagactcgctgaggtcgcgc
aaagcgcggccggaccttgagcggatctgccggatggtgcggcggcggcacggctctgag
ccggaccggacctgcgtggagctggagaagctgatccaggagcacgcggtgctcaaagtg
aactacaagggctcggtgtcgtaccgcaacgccgccaaagtgcagcgcggccgacggaaa
gtcgagcaggcgtcccccggaaagtcaccggccaagcgagtttgcttggccgacgtgagg
cgcgacgcgggcggcggaggagacgacgctgctacgctgggaccagccgacgaggaggcg
atggaggacggggaggtgagagagcggagagacggcgtagagggggtggaggaggatgag
ctgtccaccacagctggcctggacagcagcatggacgaagaggaggccagtctggatgca
ccttgcatgcagaacaccactgactcgggcatcggcctaagtcccatcacagaccctgga
gccagcctgcctgcaacctcccccaccccctccaaaagctctcccaaccacagtagcctg
gaactggagagagaccccctgcacgctcctgccgagcacacaccaccctccagccagcaa
gacacagggtccccggagctggagctggcgcggcagccggcggccatctgtccctcggcc
cagcggagcgcactgacgggggaggaggggccgagagtggaggagaatgcgctcacgccc
gatcagttgctgtccgactgcagagcctctttgcagcaccaggacgaggcagtgggttct
gaccgagaacctgcccagggctctgtcccaacggaagagggtaaaaactgtagtaatgag
ggaaatgttgcttctccacaagaaatcgaacaagccaagaatggaggagggataaagaga
gcagactcggtgaagagtgaggagatcacacaggacccgctactgtggagtgtatcggac
gtggtgagctacttcaccgcagtcggatttcccgaacaggcagtggctttcagaacacag
gaaatcgacgggaagtcgcttctcctgatgcagcgcagcgacgtcctgacgggtctgtcg
atcagactcggccccgccctcaagatatacgaacatcacgtgaaggtgctgcagaggagc
cactttcaggatgacagtgatgtcatgtcttag
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