Astyanax mexicanus (Mexican tetra): 103043631
Help
Entry
103043631 CDS
T05042
Symbol
sec13
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03013
Nucleocytoplasmic transport
amex04141
Protein processing in endoplasmic reticulum
amex04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103043631 (sec13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103043631 (sec13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
103043631 (sec13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103043631 (sec13)
04131 Membrane trafficking [BR:
amex04131
]
103043631 (sec13)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103043631 (sec13)
Membrane trafficking [BR:
amex04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
103043631 (sec13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
103043631 (sec13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
103043631 (sec13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
EIF3I
WD40_Gbeta
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
103043631
NCBI-ProteinID:
XP_007251556
Ensembl:
ENSAMXG00000004356
UniProt:
A0A8B9JUZ0
LinkDB
All DBs
Position
24:complement(1052893..1062371)
Genome browser
AA seq
320 aa
AA seq
DB search
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILVADLRGHEGPV
WQVAWAHPTYGNILASCSYDRKVIIWKEENGTWDKMYKYTGHNSSVNSICWGPYEFGLTL
ACGSSDGAISILTYTGDGQWDIKKINNAHTIGCNAVSWAPAVVPGSLIDQPTGQKPLYIK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLTTSTIASCSQDGRVF
IWTCDDPSGNTWTAKLLHKFSDVVWHVSWSITGNILAVSGGDNKVTLWKESVDGQWSCIS
DVNKSQGGLSSITDTQQNEQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgtaattaatacagtggatacctcacacgaggacatgatccatgatgcccag
atggactactatggcacacgactggcgacctgctcctctgatcgctctgtgaagatcttt
gatgtaaagaatggaggacagattcttgtggctgatttgagggggcatgaaggtccagtg
tggcaggtagcctgggctcatccaacctacggcaacatcctggcctcctgttcctatgac
cgaaaagtcattatctggaaagaggagaacgggacatgggataagatgtacaaatacaca
ggccacaactcctcagtgaactctatctgctgggggccgtatgagtttggtttgactctg
gcttgtggaagctctgatggcgcgatttcaattctgacctacaccggtgacggacagtgg
gacattaagaagattaataatgcacacactattggctgtaatgcagtgagctgggctcca
gccgtggttccaggaagtcttatagaccagcccacaggacagaaacccctctacatcaag
agattcgtctccgggggctgcgacaacttagtcaagctgtggaaagaagaggacggccaa
tggaaggaggaccagaaacttgaagctcacagtgattgggtgagagatgtaggctgggct
ccatctattggactgaccaccagcacaatcgccagctgctcacaggacggtagggtgttt
atctggacgtgtgacgatccctccggaaacacctggaccgctaaactcctgcacaaattc
agcgacgtggtctggcacgtgagctggtccatcaccgggaacatcctggcagtatctgga
ggagacaacaaggtgacgctgtggaaggagtcggtggacggacagtggtcctgcatcagt
gacgtcaataagagccaggggggcttgtcctccatcacagacacccagcagaacgagcag
tga
DBGET
integrated database retrieval system