Astyanax mexicanus (Mexican tetra): 103043643
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Entry
103043643 CDS
T05042
Symbol
mcf2l2
Name
(RefSeq) guanine nucleotide exchange factor DBS isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103043643 (mcf2l2)
Membrane trafficking [BR:
amex04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
103043643 (mcf2l2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
CRAL_TRIO_2
PH
SH3_9
SH3_1
SH3_2
DUF7799
GlutR_dimer
PH_10
Spectrin
Motif
Other DBs
NCBI-GeneID:
103043643
NCBI-ProteinID:
XP_049321692
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All DBs
Position
16:complement(4522129..4700090)
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AA seq
1249 aa
AA seq
DB search
MLCWLEEEEMSVQEFLERVGSVITHVDEIMQQEIRPLLAVDIIEQLHRQFALLSGGRGKD
GAPIITFPEYSDFSELPEEDFINVVTYLTSIPSLDAASIGFIIIIDRRRDKWSSVKASLA
RIAGAFPGNLQLVLVLRPSRFFQRAIADIGIRLHRDDFKMKVPIVMLNSLSDLHGYIDKA
QLTCELGGSLQYCHSQWIHHRTAIENFAVTVKSTAQMLQKFGTDLAETELPNDVQCTKDL
LTSHTEKHDKLKDELKLALKQGSTLLSCIKDLANKTENHKLNPDETENQTTVERLLAQLD
ETENAFEQFWSKHHLKLEQCLQLRHFEQDFREVKVSLDCLMEDLLKLTDIGDCVSRVVQL
LKELKSLEDSAQESLEKAQLHALHGDQLIQSNHYAVDSIRPKCVELRRICDDFSNESKKK
YDILSKSLEIHTGMDKVNHWCESGVYLMASQAVDKCQSQEGAEAALQDIQKYMDSAREQQ
LSQLKDLYNQHEIILSDHIKINVQSALKRLDEVQEMFEKRHISLKRLSAKQSRPVQPVAP
RPESSPKRPSPKTPRPSGPAPVRRSSENNSTKPATEAELARKKNIRKAKGGIKIEVMHEE
SQGGSSHILVTSETEESLSSRRRHIMNELIESERYYVEELQSIMEGYVAALDNSEMTHLI
PAVLENKKDVLFGNLGEIWDFHNKTFLKELENYVEKPELVGTCFLKRKEELQIYEKYCQN
KPRSEALWRQCGDSMFFQECQKRLDHKLSLDAYLLKPVQRITKYQLMLKEMLKCSKNSEG
TAELEEALATMLDIIKSVNDSMHQIAITGFEGNLNDLGKLLMQGSFNVWTDHKKGHNKVK
DLARFKPMQRHLFLYNTVILFCKKREEISEGHEKSPSYSFKHSLKMSAVGITENVKGDVK
KFEIWFNGREEVYIIQASSMDVKNMWVSEIRKVLTGQLEACREASQLHQRITENIYHAPM
RNFRKVALRQSDSSSPETGYRRSDGPNMRHKRADASGSLSSDQSSALARKRFTLQGLSNR
RSLPSEPAPKETDVPRRFSLASTLSASSTTRTKGPLSANLKSKRHQIKSDPTPFGYGDSI
RGALPADSKNKGTASTKPSVPRSTSQPGWTQRRLPSMDTEDFETIPSSAEELSNSSDGEE
DSNNKNGELERFQVQLTYEARAPHELSLEAGDVVQFVQEAENGHWLVKNLNTLKTGLVPP
TILQSTAGSVDIYSHSDIFSDLCTAALTDTEETEESAGPLLAQQSRLAC
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgctctgctggctggaagaggaagagatgtctgtgcaggagttcctggaaagggtgggc
tctgtgatcacccatgtcgatgagattatgcagcaggagatacggccgctgctggctgtg
gatatcatcgagcagcttcacaggcagttcgctctgctctcaggaggaagaggaaaggat
ggcgcccccatcatcaccttccccgagtactctgacttcagtgagcttcctgaggaggat
tttattaatgtagttacatatctcaccagcatacccagtctggacgcggccagtatcggc
ttcataattatcatagaccgcaggcgggacaaatggagttcggtgaaagcctcgttggct
cgaatagcaggggcgttccctggcaacctgcagctggtcctggtgctgaggccctcgcgt
ttcttccaaagagctatagctgacatcggcatccgattacaccgcgatgactttaaaatg
aaggtaccgatcgtcatgctgaactctctctcagatctgcacggctacatcgacaaggct
cagctgacctgtgagctggggggcagtctgcagtactgtcacagtcagtggattcaccat
cgcacagctattgaaaactttgcggtgacggtgaaaagcacagcgcagatgctgcagaag
tttggaacagatttggcagaaactgaactccccaatgacgtgcagtgcaccaaagatctg
ctgacgtctcacacagagaaacacgataaactcaaggatgaactaaagttagcattgaaa
caaggaagcactctgttgtcttgcatcaaagacctggccaataaaaccgaaaaccacaag
ctgaacccagatgaaacggaaaatcagaccactgttgaaaggttgctggctcagttggat
gagactgaaaatgcttttgaacagttctggtccaaacatcatctaaagttagagcagtgt
ttgcagctcaggcacttcgagcaggactttagagaggtaaaagtgtcgttggactgtctg
atggaggatttgctgaagctcacagacatcggggactgtgttagtcgtgtggttcagctg
ctgaaagaactgaagagtctagaggacagcgctcaggagtctttggagaaggcgcagctg
catgccctgcacggagaccagctcatccagagcaaccactacgctgtggattccatccgg
cccaaatgcgtggagctgcgacgcatttgtgacgacttcagcaacgagtccaagaagaaa
tacgacatcctgtccaaatcactggagatccatacaggcatggacaaggttaaccactgg
tgtgagagtggagtgtatctaatggcgtctcaggctgtggataagtgccagtctcaggag
ggtgcggaggcggcactgcaggacatccagaagtacatggattcagccagggagcagcag
ctcagtcagctaaaagacctgtacaaccagcacgagatcatcctgtctgatcacataaag
attaacgtgcagagcgctttaaagaggctggatgaagttcaagagatgtttgagaagagg
cacatcagcctaaagaggctttcagctaagcagagcagacctgtgcagcctgtggctcca
cgacctgaatcttcacccaagcgtccttcacccaaaaccccacgaccttccggcccagca
cccgttcgcagaagctcagagaacaattccaccaagccggccactgaagcggagttggcg
agaaagaaaaacatacgtaaagctaaaggaggcatcaagattgaagttatgcatgaagaa
agccaaggaggctccagccacattctcgtgaccagcgagacagaggagagcctgtctagc
aggcggagacacattatgaacgagctgattgagagtgagagatattatgtggaagagctg
cagagcataatggagggttatgttgccgcgctggataactcagaaatgactcatttgatc
ccggcggttctggaaaacaagaaggatgtgctctttggcaacctgggagaaatctgggac
tttcacaacaagacttttctgaaagagctggagaactatgtggagaagcctgagttagtg
ggaacatgcttcttgaaaagaaaagaagagctgcagatctatgagaaatactgtcaaaat
aaaccccggtctgaagctctctggagacagtgtggagacagcatgttctttcaggagtgc
cagaaacggttggaccataagctttcgttagatgcgtacctgctgaagcccgtgcagaga
atcaccaagtaccagctgatgctgaaggagatgctgaagtgcagtaagaactctgaaggc
acggcggagctggaggaagctttagccactatgctggacatcataaagtcagtgaacgac
tcaatgcaccagatcgccatcactggctttgagggtaacctgaacgacctgggaaagctg
ctcatgcagggctccttcaacgtctggaccgaccataagaaaggccacaacaaggtgaag
gacctggcccgattcaaacccatgcagagacatctgttcctgtacaatacagtgatttta
ttctgtaagaagcgtgaggagatctcagaaggccacgagaaatcaccctcatacagtttc
aagcattccctcaagatgagtgcggttggaatcacagagaatgtaaaaggagacgtcaaa
aagtttgaaatctggttcaacgggagagaggaagtttacatcattcaggcttcctccatg
gacgtgaagaacatgtgggtgtctgagattcggaaagtgctgacaggacagctggaggcg
tgtagagaggcaagccagctccatcaaaggatcacggagaacatctaccatgctcccatg
aggaattttcgaaaagtggccctcaggcagtcggactcctccagccccgagacaggctac
aggcgcagcgacggccccaacatgaggcataaacgagctgatgcttccggcagccttagc
tcagaccaatcctcagctctggctagaaagcgtttcaccttacaaggcctgtccaatcgc
aggtctctgccttcagaaccagcacctaaggagacagacgtcccccgccgcttctcttta
gcctccaccctcagtgcctcctccaccacacgcactaaaggtcctctttctgcaaacctt
aaaagcaagagacaccaaataaagagcgaccccacgccgtttggctatggagattctata
cgaggtgctcttccagctgacagcaaaaataaaggtacagccagtaccaaacccagtgtg
cctagatccacctctcaaccaggatggactcaacgtcgtttaccctcgatggacactgaa
gacttcgaaaccatcccatccagcgctgaggagctatcgaattcttcagacggagaagag
gacagcaataacaaaaatggggagcttgaacgctttcaggtgcagctgacgtatgaggcg
cgcgctccacacgagctctcgctggaggcaggagatgtagttcagttcgtacaggaggct
gagaatggccactggctagtcaagaacctaaatactctgaagacagggctggtcccaccc
acgatcctgcagtctacagcaggaagtgtggacatttacagtcactctgacatcttcagt
gacctgtgcaccgcggctctcacggacaccgaggagacagaggagagcgccgggccgctg
ctggcccagcagagccggcttgcatgttga
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