Astyanax mexicanus (Mexican tetra): 103043717
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Entry
103043717 CDS
T05042
Symbol
pcdh8
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
amex04515
]
103043717 (pcdh8)
Cell adhesion molecules [BR:
amex04515
]
Cadherins
Protocadherins
103043717 (pcdh8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
SGBP_BT4661-like
Motif
Other DBs
NCBI-GeneID:
103043717
NCBI-ProteinID:
XP_007228020
Ensembl:
ENSAMXG00000001879
UniProt:
A0A8B9J406
LinkDB
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Position
11:1702516..1707774
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AA seq
964 aa
AA seq
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MGIWRFWRIWIWRCSLLLACEVLVVFCTTAKYSTFEEDAPGTEIGNLSQDLKLDPGEDPE
TTFRFMQKTNGSVIEMRPTDGLLTVGEVIDRERLCLRTSPCLISFDVVAFSKEKFQLVHV
EIEVKDVNDYAPRFPRNETHVEVLESAALGTRILLDVAVDQDVGENYIQSYHISHSSHFI
VETSTREDGVRYAELVLVKKLDRELDDSYILDVTAVDGGTPNKLGSMIIYVKVFDCNDNS
PTFEHSSLKVELSEDSAVGVRVLKVHAFDPDDGLNGQVVYRFASGPASEASRIFHIDSAS
GEVTLKENVDYEKRRSYELQIEASDLGENSASSTCRVVIDVVDINDNAPEISIKPMTSTS
DGVAYITEAAAQESFVALISTTDLDSGSNGYVRTSLQGHQHFRLQQAYGDTFMIVTTAAL
DREQNSEYNLTIVAEDLGSPPFKTVKHYTIRISDENDNAPQFSQAVYEVSVLENNIPGSF
LAAVLALDLDVGKNAKVEYSLVDGQTINDSPLSTFVSIDPLSGSLYSLRSFDFESLNKIQ
FSVQAKDRGSPSLSSSALVRVKVVDENDNFPYFTYPEFKNESADVPLPCSAPTGFLALRV
AATDEDDGANGEVSFRIIDIEGGDKKFFSIDKKTGAIVLKQKVTSACGDMLQIKVSVSDN
GKASLSSVATIRFIITDTDSSEDQMLVLLKSKDEDLLDFNAWTVVFLTLAGGCALLLVAF
AVVTVVSKLCRRKDHRRRAACGLYGSTPFSINSAANAGAYSGTRVFLNNERDLARECLYE
DKTMGSEEKLFLPCKPFEQTNLWQDEKYCLQKSVTSNTDQLSMKDSGKGDSDFNDSDSDV
SGEGLRRNLTTFQPWAKGSFVAQDSLVADWQGRYGGSSSGDVYTIGFSQSLLHNSTHANP
HSWKEACYGANTLNARNSAVPYLRTETLPSYSAHQAAAAAVNHRLEPGPDELAVSAGSEI
ATTF
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgggaatttggaggttttggaggatttggatttggagatgctctctgctgttggcctgc
gaagttctggtggttttctgcaccacagccaagtacagcacgtttgaggaggatgctcca
ggcacagagattgggaatctctcacaagacctgaagctggaccctggagaagatccggag
acgacgttccggtttatgcagaaaaccaacggttctgtaatcgaaatgaggccgacggac
gggctgctgacggtgggggaggtcatagatagagagcggttgtgcctcagaacctcgcct
tgcctcatttccttcgacgttgtggctttctccaaggagaagtttcagcttgttcacgtg
gagatcgaggtgaaggatgttaacgattacgctcctcgatttcctcgcaacgagacgcat
gtggaagtcttggaaagtgcagcgttgggtacaagaatcctgctggacgtggctgtggac
caggatgttggggaaaactacattcagagctaccacatctcacactccagtcacttcatt
gttgaaacaagtactagagaagatggtgtgaggtacgctgagctggtgctggtgaagaag
ctggatcgtgagctggatgatagctatatcttagacgttacagctgtggatggtggaaca
ccaaacaagttgggttccatgatcatttacgttaaagtgtttgactgcaacgacaacagc
ccgacgtttgagcacagctctctgaaagtggagttgagtgaggattctgcggttggtgtc
cgagtccttaaagtccacgccttcgatccggatgatggcttgaatggtcaggtggtctac
aggtttgcaagcggtcctgcttcagaggcatcgaggattttccacattgactctgcctca
ggtgaggtgactcttaaggaaaacgtggactatgaaaagcgtagatcctacgagcttcaa
atcgaggcttcagacctcggcgaaaactcagcttcatccacctgtagggtggtgatagat
gttgtagacattaacgacaacgctccagagatttctattaagcccatgacctccacaagc
gatggcgtggcctacatcacagaggcagcagctcaggaaagctttgtggctctcatcagc
accacggatcttgactcgggatctaacggctacgtccgcaccagcttgcaaggtcaccag
cactttaggcttcagcaggcttatggagacactttcatgatcgtgaccactgcagccttg
gacagggagcagaactcagaatacaatcttacgatagttgctgaggacttgggttcaccg
ccctttaaaacggttaaacattacaccattcggataagcgatgaaaatgacaacgctcct
caatttagtcaggcagtttatgaggtttcagtcctggaaaacaacatccctgggtcattt
ctggcggcagtgttggcacttgatttggacgttgggaaaaacgcaaaagtagagtacagt
cttgttgatggacagaccattaatgactcgcctttgtcaacttttgtctcgatagaccca
ctttcagggtctttgtacagcttgagatccttcgattttgaatctctcaacaagatccag
ttctcagttcaagctaaagacagaggttctccatctttgtccagctcagctttggtccga
gtcaaagtggtggatgaaaatgataacttcccttactttacctacccggagttcaaaaat
gagtcagctgatgtccctctaccatgctctgctcctactgggttccttgccctgagggtc
gccgccacagatgaggacgacggcgccaatggtgaggtcagtttccgcatcatagacata
gaaggtggtgataagaaatttttctcaattgacaaaaagaccggagcgattgttcttaaa
cagaaggtcacgtcagcctgtggcgatatgctacaaatcaaagtttcagtatctgataat
ggaaaagcttctctctccagcgtcgccaccatcagattcattatcacagatacagactcc
tcagaagaccagatgctcgtcttgctaaaatcgaaagatgaggatcttctggattttaat
gcatggaccgtggtattcctcacccttgctggaggttgtgctctgctgctggtagcgttc
gcggtcgttacagtagttagtaaactgtgccggaggaaagatcaccggagaagagccgcc
tgtggcctgtacggatcgacccccttttccataaactctgcagcgaatgcaggagcgtac
agcggaacaagagttttcctcaacaacgagcgagacctggcacgggaatgcctttatgag
gacaagaccatgggctctgaggagaagctcttcctgccctgcaaaccttttgagcagaca
aatctatggcaagatgagaagtactgtctgcagaagagtgtcaccagcaacaccgaccag
ctgagcatgaaggacagcggcaaaggggacagcgatttcaacgacagtgattcagacgtc
agcggagaggggcttagaagaaacctgaccactttccagccgtgggctaaaggttccttt
gtggcgcaggattccctggtggccgactggcaggggagatacgggggttcatcttctggg
gacgtctacacaataggcttctcccagtcgctgcttcataatagcactcatgctaatccc
cattcctggaaagaagcctgctacggcgctaacacgctaaacgctaggaactcggccgtg
ccgtatttgagaacggaaactttgccatcttattcggctcatcaggcggcggctgctgcc
gtcaaccatcgtctcgaacccggtccagatgaattagccgtctcagccgggtcagaaata
gcgaccactttttaa
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