KEGG   Astyanax mexicanus (Mexican tetra): 103043717
Entry
103043717         CDS       T05042                                 
Symbol
pcdh8
Name
(RefSeq) protocadherin-8
  KO
K16499  protocadherin delta 2
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:amex04515]
    103043717 (pcdh8)
Cell adhesion molecules [BR:amex04515]
 Cadherins
  Protocadherins
   103043717 (pcdh8)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_CELSR2_9th SGBP_BT4661-like
Other DBs
NCBI-GeneID: 103043717
NCBI-ProteinID: XP_007228020
Ensembl: ENSAMXG00000001879
UniProt: A0A8B9J406
LinkDB
Position
11:1702516..1707774
AA seq 964 aa
MGIWRFWRIWIWRCSLLLACEVLVVFCTTAKYSTFEEDAPGTEIGNLSQDLKLDPGEDPE
TTFRFMQKTNGSVIEMRPTDGLLTVGEVIDRERLCLRTSPCLISFDVVAFSKEKFQLVHV
EIEVKDVNDYAPRFPRNETHVEVLESAALGTRILLDVAVDQDVGENYIQSYHISHSSHFI
VETSTREDGVRYAELVLVKKLDRELDDSYILDVTAVDGGTPNKLGSMIIYVKVFDCNDNS
PTFEHSSLKVELSEDSAVGVRVLKVHAFDPDDGLNGQVVYRFASGPASEASRIFHIDSAS
GEVTLKENVDYEKRRSYELQIEASDLGENSASSTCRVVIDVVDINDNAPEISIKPMTSTS
DGVAYITEAAAQESFVALISTTDLDSGSNGYVRTSLQGHQHFRLQQAYGDTFMIVTTAAL
DREQNSEYNLTIVAEDLGSPPFKTVKHYTIRISDENDNAPQFSQAVYEVSVLENNIPGSF
LAAVLALDLDVGKNAKVEYSLVDGQTINDSPLSTFVSIDPLSGSLYSLRSFDFESLNKIQ
FSVQAKDRGSPSLSSSALVRVKVVDENDNFPYFTYPEFKNESADVPLPCSAPTGFLALRV
AATDEDDGANGEVSFRIIDIEGGDKKFFSIDKKTGAIVLKQKVTSACGDMLQIKVSVSDN
GKASLSSVATIRFIITDTDSSEDQMLVLLKSKDEDLLDFNAWTVVFLTLAGGCALLLVAF
AVVTVVSKLCRRKDHRRRAACGLYGSTPFSINSAANAGAYSGTRVFLNNERDLARECLYE
DKTMGSEEKLFLPCKPFEQTNLWQDEKYCLQKSVTSNTDQLSMKDSGKGDSDFNDSDSDV
SGEGLRRNLTTFQPWAKGSFVAQDSLVADWQGRYGGSSSGDVYTIGFSQSLLHNSTHANP
HSWKEACYGANTLNARNSAVPYLRTETLPSYSAHQAAAAAVNHRLEPGPDELAVSAGSEI
ATTF
NT seq 2895 nt   +upstreamnt  +downstreamnt
atgggaatttggaggttttggaggatttggatttggagatgctctctgctgttggcctgc
gaagttctggtggttttctgcaccacagccaagtacagcacgtttgaggaggatgctcca
ggcacagagattgggaatctctcacaagacctgaagctggaccctggagaagatccggag
acgacgttccggtttatgcagaaaaccaacggttctgtaatcgaaatgaggccgacggac
gggctgctgacggtgggggaggtcatagatagagagcggttgtgcctcagaacctcgcct
tgcctcatttccttcgacgttgtggctttctccaaggagaagtttcagcttgttcacgtg
gagatcgaggtgaaggatgttaacgattacgctcctcgatttcctcgcaacgagacgcat
gtggaagtcttggaaagtgcagcgttgggtacaagaatcctgctggacgtggctgtggac
caggatgttggggaaaactacattcagagctaccacatctcacactccagtcacttcatt
gttgaaacaagtactagagaagatggtgtgaggtacgctgagctggtgctggtgaagaag
ctggatcgtgagctggatgatagctatatcttagacgttacagctgtggatggtggaaca
ccaaacaagttgggttccatgatcatttacgttaaagtgtttgactgcaacgacaacagc
ccgacgtttgagcacagctctctgaaagtggagttgagtgaggattctgcggttggtgtc
cgagtccttaaagtccacgccttcgatccggatgatggcttgaatggtcaggtggtctac
aggtttgcaagcggtcctgcttcagaggcatcgaggattttccacattgactctgcctca
ggtgaggtgactcttaaggaaaacgtggactatgaaaagcgtagatcctacgagcttcaa
atcgaggcttcagacctcggcgaaaactcagcttcatccacctgtagggtggtgatagat
gttgtagacattaacgacaacgctccagagatttctattaagcccatgacctccacaagc
gatggcgtggcctacatcacagaggcagcagctcaggaaagctttgtggctctcatcagc
accacggatcttgactcgggatctaacggctacgtccgcaccagcttgcaaggtcaccag
cactttaggcttcagcaggcttatggagacactttcatgatcgtgaccactgcagccttg
gacagggagcagaactcagaatacaatcttacgatagttgctgaggacttgggttcaccg
ccctttaaaacggttaaacattacaccattcggataagcgatgaaaatgacaacgctcct
caatttagtcaggcagtttatgaggtttcagtcctggaaaacaacatccctgggtcattt
ctggcggcagtgttggcacttgatttggacgttgggaaaaacgcaaaagtagagtacagt
cttgttgatggacagaccattaatgactcgcctttgtcaacttttgtctcgatagaccca
ctttcagggtctttgtacagcttgagatccttcgattttgaatctctcaacaagatccag
ttctcagttcaagctaaagacagaggttctccatctttgtccagctcagctttggtccga
gtcaaagtggtggatgaaaatgataacttcccttactttacctacccggagttcaaaaat
gagtcagctgatgtccctctaccatgctctgctcctactgggttccttgccctgagggtc
gccgccacagatgaggacgacggcgccaatggtgaggtcagtttccgcatcatagacata
gaaggtggtgataagaaatttttctcaattgacaaaaagaccggagcgattgttcttaaa
cagaaggtcacgtcagcctgtggcgatatgctacaaatcaaagtttcagtatctgataat
ggaaaagcttctctctccagcgtcgccaccatcagattcattatcacagatacagactcc
tcagaagaccagatgctcgtcttgctaaaatcgaaagatgaggatcttctggattttaat
gcatggaccgtggtattcctcacccttgctggaggttgtgctctgctgctggtagcgttc
gcggtcgttacagtagttagtaaactgtgccggaggaaagatcaccggagaagagccgcc
tgtggcctgtacggatcgacccccttttccataaactctgcagcgaatgcaggagcgtac
agcggaacaagagttttcctcaacaacgagcgagacctggcacgggaatgcctttatgag
gacaagaccatgggctctgaggagaagctcttcctgccctgcaaaccttttgagcagaca
aatctatggcaagatgagaagtactgtctgcagaagagtgtcaccagcaacaccgaccag
ctgagcatgaaggacagcggcaaaggggacagcgatttcaacgacagtgattcagacgtc
agcggagaggggcttagaagaaacctgaccactttccagccgtgggctaaaggttccttt
gtggcgcaggattccctggtggccgactggcaggggagatacgggggttcatcttctggg
gacgtctacacaataggcttctcccagtcgctgcttcataatagcactcatgctaatccc
cattcctggaaagaagcctgctacggcgctaacacgctaaacgctaggaactcggccgtg
ccgtatttgagaacggaaactttgccatcttattcggctcatcaggcggcggctgctgcc
gtcaaccatcgtctcgaacccggtccagatgaattagccgtctcagccgggtcagaaata
gcgaccactttttaa

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