Astyanax mexicanus (Mexican tetra): 103043726
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Entry
103043726 CDS
T05042
Symbol
cpdp
Name
(RefSeq) CPD photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amex03400
]
103043726 (cpdp)
Enzymes [BR:
amex01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
103043726 (cpdp)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
103043726 (cpdp)
Prokaryotic type
103043726 (cpdp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
103043726
NCBI-ProteinID:
XP_022533499
Ensembl:
ENSAMXG00000001885
LinkDB
All DBs
Position
8:complement(57609721..57615992)
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AA seq
550 aa
AA seq
DB search
MHCFVVAAKRTLNIFQTAAKLPRAAGLHALLDGRAASMSAKKAELKRRGGSGQAEGAGGK
KQRSGESAAAAGGREDGWLGLEVAELRAKNTGCKFNDKRVRFLSEEQKVKQSCSGVLYWM
SRDQRVQDNWALIYAQRLALAEELPLHICFCLVPRYLDAAYRQYAFMIRGLQEVAKECKS
LDIQFHFLRGDPEQLLLDFVKTWNIGALVTDFNPLRLHLQWIENVRKGLPSNIPFLQVDA
HNVVPCWEASPKLEYGARTIRGKITKQLPDFLTEFPPVDTHPHASKKTAKSVNWEEVLDS
VEVDRTVGEVEWARPGTSGGMAMLESFIQQRLRLFATERNNPNSEAVSHLSPWLHAGQLS
AQRVVKEVQRWGKNARESVASFTEELVVRRELADNFCYYNKEYDSIAGAYDWAKTTLKIH
AKDKRAYLYTQEQLETGKTHDQLWNAAQRQLLLEGKMHGFMRMYWAKKILEWTSSPEEAL
TIALYLNDHYSLDGCDPNGYVGCMWSICGIHDQGWAERPVFGKVRYMNYAGCKRKFDVSR
FERKYAVKTD
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcactgctttgtagttgcagcgaagagaacactgaacatcttccagacggcggctaaa
ctcccgcgtgctgcaggtttacacgcgcttttagacggcagggctgcgagcatgtctgcg
aaaaaggctgagctgaagcggaggggcggctcgggtcaggctgagggagccggggggaag
aagcagaggagtggggagagtgctgctgctgcaggggggagggaggacggctggctgggg
ctggaggtggcggagctgcgcgctaaaaacaccggctgcaagtttaacgacaagcgcgtg
cggttcctctccgaggagcagaaggtgaagcagagctgctcgggcgtgctgtactggatg
tcgagagaccagagggttcaagataactgggcactgatctatgcacagcggctcgctctg
gctgaggaactgccactccacatctgcttctgcttggtgccgcggtatctggacgcagcc
taccgtcagtatgcttttatgatcagaggactgcaggaggtggccaaggagtgtaagagt
ctggatattcagttccacttcctgcgtggtgatcctgagcagctgctgcttgactttgtg
aagacctggaatataggagcactggtgacagattttaaccccctcagactgcacctgcag
tggattgagaatgtcagaaaggggcttccgtcaaacatcccgttcttgcaggttgatgcc
cataacgtggtgccatgctgggaggcctctcctaagctggagtatggggctaggaccatc
agagggaaaatcaccaaacaactcccagatttcctcactgaattcccacctgtggacaca
catcctcacgcctcaaaaaaaacggcaaagtcggtgaactgggaggaggttctggattcg
gtggaggtggaccggactgtgggtgaggtggaatgggcgcggccgggcacctctggagga
atggccatgctcgagtcgttcatccagcagcggctgcgtctcttcgctaccgagagaaac
aacccgaactcggaggctgtcagccatctctcaccctggttacatgctggtcagctgtcc
gctcagcgcgtggtgaaggaggtgcagcgctgggggaagaacgccagggagtccgtggcc
tcctttacagaggagctggtggtgcgcagagagctggctgataacttctgctactataac
aaagaatacgacagcattgcaggtgcttatgactgggcaaagaccacgctgaagatccac
gctaaagacaaaagagcttatttatacacccaggagcagctggagacgggcaaaacccac
gatcagctctggaacgctgcacagaggcagctgctgttagaggggaagatgcacgggttc
atgagaatgtactgggccaaaaagatcctggagtggacctcgtcccctgaggaggcgctg
accatcgccctctatctgaatgaccactactcgctggacggctgtgaccccaatggatac
gtaggctgcatgtggtccatctgtgggatccacgaccagggctgggctgaacggcctgtt
ttcggtaaagtgcgctacatgaattacgccggctgtaagcgtaagttcgacgtgagccgg
tttgagaggaagtatgcagtaaaaactgactga
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