Astyanax mexicanus (Mexican tetra): 103043832
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Entry
103043832 CDS
T05042
Symbol
ttc6
Name
(RefSeq) uncharacterized protein ttc6 isoform X2
KO
K24929
tetratricopeptide repeat protein 6
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amex04990
]
103043832 (ttc6)
Domain-containing proteins not elsewhere classified [BR:
amex04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
103043832 (ttc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_17
TPR_8
TPR_9
TPR_16
TPR_14
TPR_12
TPR_19
TPR_CcmH_CycH
ARM_TT21_N
TPR_6
NatA_aux_su
ANAPC3
SHNi-TPR
GcnA_N
TPR_Slam
Motif
Other DBs
NCBI-GeneID:
103043832
NCBI-ProteinID:
XP_022528672
Ensembl:
ENSAMXG00000000300
LinkDB
All DBs
Position
14:18940814..19008348
Genome browser
AA seq
1802 aa
AA seq
DB search
MKRNINPNVSTSEKTSPKLGSGQEAVKTPAIASLAGTARLVSLSKRPQPPAKPRSEKPST
AGGAFKNQTPSEQLSGEKKQAPRNQGQYLTVLDRCCLLNSFSSDEITVDRNEYEQDRRKC
RKESEKKRRQLTDRQQEERASKEHSSGSSKSSSATSTIRSIKSVTELLEEARNIATGGLQ
EIHHQRVTEKAVSDMMKQESGHTVNDQMTKCGDLHTSEPGVREHVVFDISDKQVRSHQDV
LEGIREEKIPAGTMNHAPDLTRSCKVDILYSQKVSELISDEVTGLEALGSSFLPVQRPQR
ALQQTRTLHGLSLLATWTPKTDSGEYKTIHHLCTTPACQVLPVELQLASRMYHTQDLFIK
TTQFLQQRTAFRQIAAHPDSQWILWNGVPVENVGDTEQTGGITQLPPQSSDALEEWQKIA
EYYVEKPRMILCGHAATLCDGQLRMFWSPAPPKFSSAPNVVKDALFPHYQVTPADLSGEN
FLAGLQAEMESGNDQMEKKPRGLLENILSRKHKSLMDLRAEELVSEPSPEDHHEQQLKRP
FSAPHFLPASESPLRLQSDFTSISRELDRVRQQPQTPIYTQSNSMLSASQAQSQNTRNKP
TSPEKPSWDPSHSVSQHSRVRPKRVLGKSIKKKKSHKSSKLAYVHKKLKELPETLTRSVS
SCELSQIHKVSAEQTLLLRFPSLPLLLDFDGFAVEQGGIPVMLSHQEWVGDIWNTWFDEV
FPPQDHSTTKNEPEARQMQPVSNKQLKKKKEIPILDKVDLSEALDEGFTVEDLEMEVAKL
TESMIKNTGNNGFDLCRRGALYKKLGLLKQALDDLNAAISLEPHLLDAYWHRHSISLLRN
APNSALDDLHFIIKHNKKHADAFRSRAEIYRMRGETRLAILDYTQVIKNKPDDAENYFRR
ADLYEKTNEISLAMEDYAKTFAINLERTDALMAHALHHFHTSVWRVALDDFSLLLKQEPA
NARARTYRGRTFAKLGLFKEAIEDFCLAVHLDPRDWLAFYHRGCLLRRILPDVALRDLSV
SVLINGSSENLAAFLYRGLLYTEQQQWQKAMADFIAVIKIDRTVAAAHINLGLIYMLKMN
QSQKAIRRFSNAIKADPTNIKGYVCRARAYHNVNDLKRALKDLTRALHLRPDDQYLHIMR
GQCLCNMEQTALATFCIQYSAEMKKALGLTLVQQAAVQSFLQNDAKAIACLVSAANSCPS
PSILILLGKTQLKVHKFMEAVESFKKALSFLNPKKTNICNVPEAPELYYLTGVCYMAQGE
DSLLPQALEAFSKATRINPDYAEAYHQRGLCRIRLQHSNSVQDFNRALCINPNFYQAYLS
RAALYGAKGLYNKAIFNCSEALKIQPKNVKAYLYKGALKFYLKEYKKAVEDLTVAIEIDS
SCSLAYYNRGVCYQVLQEYKLALRDYSTVLLLPEQKEIEFKVLINRTLVHKELNDHYNAL
QDLKAAASKQPKDASLFHSLGLYFHRLGQLQEAVEAYSEALRLSPFLLNAYVGRGNAFMD
YGHSQGYKQAQRDFLSALHLNPRCSSARIGLAYNLQVFGCFQRAWNQFTVAVEVNPKCWA
AYEGRAIVNLQMGNTYAAFQDINNALKCNPHSDQLLTNRGVINQFMGDKVSAMSDYQRAI
SLNPTCALAFFNAANLYFYNRQFEQACEYYSRAIELDPSDESPILNRAISLALLRKIPES
LQDFSEALRLCPYSAHIYFNRANLYHSLRKYKAAEREFTQALQLQPDDALLYKLRADVRG
HLGLMEEAVKDYRTAVELQDSIQRPDSFSRTLPTGHGPQDMAHRTLPTGNGPWEASHWKL
PI
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaatatcaatccaaatgtgtccacaagtgaaaagacttcaccaaagcttggt
tctggacaagaggcggtgaagacgccagctatagcatctcttgcaggaaccgctagatta
gtatctctgtccaaaaggcctcagcctcctgctaagcctagatcagagaagccttcaaca
gcagggggggcttttaagaaccagactccttcagagcagttgtcaggtgaaaagaagcaa
gctcctagaaatcagggtcagtatttaacagttctggatagatgctgtttgctgaactcc
tttagctctgatgaaattacagtggatcgtaatgagtatgaacaggatagacgaaaatgc
agaaaggaaagcgagaaaaagagaagacagctgacggataggcaacaggaggagagggct
tctaaagaacacagctcaggtagttctaaaagcagctctgccaccagcaccattcggagt
ataaagtctgtcactgaactactagaggaggccagaaatattgcaactgggggactgcag
gagatccaccaccagagggtgacagagaaagcagtatcagatatgatgaagcaggaaagt
ggacacacagtgaatgaccaaatgaccaaatgtggagacctgcatacctctgagccaggg
gtacgagaacatgtggtctttgatatttctgataagcaggtccggagccatcaggacgtc
ctagaaggcatcagagaagagaaaattcctgcagggactatgaatcatgcacctgatttg
acaaggagctgtaaggtagacattctatattcacagaaagtctcagagcttatctctgat
gaggtgactggtttagaggctctagggagcagttttctaccagtccagagacctcaaagg
gcattgcagcaaacaagaaccttgcatggcctttctcttcttgcaacctggacccctaaa
acagattcaggggagtacaaaaccatccaccacctctgtactacacctgcctgtcaagtc
ctgcctgtggagctgcagttagcctccagaatgtaccacactcaggacctgttcataaaa
actacacagtttctccagcagaggacagcattcagacaaatagctgcccaccctgactct
caatggattctgtggaatggtgttcctgtggagaatgttggagatacagagcagacaggt
ggcatcacacaacttcctccacagtcatcagatgctctggaggagtggcagaagatcgcc
gagtactatgtggaaaaacccaggatgattttgtgtggacatgcggctacactatgtgat
ggacagttgagaatgttctggagtccagcacctccaaaattcagctctgctccaaatgtt
gtaaaagacgcactcttcccccactatcaggtaacccctgctgatctctccggtgagaat
ttcttggctggtctgcaggctgagatggaatcaggcaatgatcagatggagaagaagcca
agaggtttattggaaaatattctctccagaaaacacaagtctttgatggatctgagagca
gaggaattggtttctgagccttctccagaggatcaccacgaacagcagctgaagcggccc
ttctctgccccacacttcctcccagcttctgagtctccactgaggctgcagtctgacttc
accagcatcagcagagagctggaccgcgtccgacagcagccgcagacccccatctacacc
cagtctaattccatgctcagtgccagccaggctcagtcacagaatactcgcaataagccc
acctctccagagaagccgagctgggacccaagccacagtgtatcacagcatagcagggtc
agacccaagagggtcctgggaaagtctatcaaaaaaaagaagagtcacaaatcttccaag
ctggcctacgttcataagaaactgaaggagctgccagaaactcttaccaggagtgtgtcc
tcgtgtgagctttcacaaattcacaaagtatcagcagaacagactcttctcctccgcttc
cccagtctaccattgctactagactttgatggttttgctgtggaacagggaggtattcct
gtcatgctttcacatcaagagtgggttggagatatttggaacacctggtttgatgaggtc
ttccccccacaagatcacagcaccaccaagaatgagccagaagccagacagatgcagcca
gtctccaataagcagctaaagaagaagaaagagatcccaattctggacaaagtggacctt
tctgaagcactagatgagggttttaccgttgaagacctggagatggaggtggccaagctg
acagagtctatgattaaaaacacagggaacaatggtttcgacctgtgccgcagaggagcg
ctgtataaaaaactgggtcttctcaaacaagctcttgatgatctgaatgctgccatctcc
ctggagcctcatttactggacgcctactggcacagacacagcatctccctgctgagaaat
gcccccaatagtgctctcgatgatctgcacttcatcattaagcacaacaagaagcatgca
gatgccttcaggtcaagagcagagatctacagaatgagaggagagactagactggccata
ttggactacacacaggtcataaagaacaagcctgatgatgctgagaactactttagaaga
gcggatctgtatgagaaaacaaatgagatttctttggccatggaggactatgctaaaaca
tttgccattaacctggagaggacggacgcgctgatggcacatgccctgcatcactttcac
acctctgtctggagggtggccctggatgacttctccttactgctgaagcaggagccagca
aacgccagagccaggacctacagaggaaggacctttgccaagcttgggctttttaaagaa
gctattgaagacttttgtctggctgtgcacttggatcccagggactggttggcattttac
caccgtggctgcctgctcaggagaatactgcccgatgtggccttaagagacctcagtgtg
tctgtgctgatcaatggtagttcagagaatcttgctgctttcctttatcgtggtctgctc
tacacggaacagcagcagtggcagaaggccatggccgactttatagctgtgatcaaaatc
gacaggactgttgctgcagctcatatcaacctggggcttatctacatgctgaagatgaac
cagagtcaaaaggccattcggaggtttagcaatgctataaaagcagaccccacaaacata
aagggctacgtatgccgagctagagcttaccacaatgtgaatgatctgaagagggcactg
aaagatctgactagagctttacacctgaggccagatgaccaatatctccacatcatgaga
gggcagtgtttgtgtaatatggaacagaccgccctcgcaaccttctgtatacagtattca
gcggagatgaaaaaagctctaggcttgactctggtccagcaggcagctgtccagtctttc
ttgcagaacgatgccaaagctattgcctgcctggtgtcagccgccaactcctgcccctcc
ccttccatcctcatcctgttaggaaagacacagttgaaggtgcacaagttcatggaagct
gtggagagctttaaaaaagctctgtctttcctgaatcccaaaaagacaaacatctgtaat
gtgccagaggctcctgagctctactacctcaccggcgtgtgctacatggctcagggagaa
gactctttactgcctcaggctctggaagctttcagcaaggcaaccagaataaaccctgac
tatgctgaagcttaccaccagagaggcctgtgccgcatacgcctacagcactccaacagt
gtacaggacttcaacagagcgctctgcatcaacccaaacttctaccaggcctacttaagc
cgagctgcattgtacggagctaaaggactatataacaaagccattttcaactgcagtgaa
gccctcaagattcagccaaagaatgttaaagcctacctgtataaaggagctctcaaattt
tatttaaaggagtataagaaagcagtggaggacttgacagtggccattgaaatcgacagt
tcctgctctcttgcgtactataaccgtggtgtgtgttaccaggttctgcaggaatataaa
ttggctcttcgagactacagcactgtgctgcttcttcctgaacagaaagagattgagttt
aaagtgctcataaatcgtacccttgtccacaaggagcttaatgaccactacaatgccctt
caggacttgaaagcagctgcctcaaaacagcccaaggatgcatccctctttcattcactg
ggactctatttccacaggttaggacaactgcaggaggcggtggaggcttacagcgaggct
ttgagactcagcccttttctcctgaatgcctacgttggacgtggcaatgcctttatggac
tatggccacagccagggctacaaacaggcccaaagggacttcctctctgccctgcatctc
aaccctcgctgttccagtgcccgcattggcctggcctacaacttacaggtttttggatgc
ttccagagggcctggaatcagttcacagtggctgtggaggttaatccgaagtgctgggct
gcctatgagggaagagctattgtcaatctgcagatggggaacacatatgcagccttccag
gacataaacaatgctctgaagtgtaatcctcactcagaccagctcctcacaaatcgaggt
gtgataaaccagttcatgggagacaaagtcagcgccatgagtgattatcagagagccatt
tccctcaaccccacctgtgctcttgctttcttcaatgctgccaacctctatttctacaac
agacagtttgagcaggcgtgtgagtactacagccgggccattgagctggaccctagtgac
gagtcgcccatcctgaaccgagccattagcctagctctgctgcggaaaattccagagtcc
ttacaggacttcagtgaagctctccgtctctgcccttattcagctcatatctacttcaac
agagctaacctgtaccactccctcagaaagtataaagcagcagagagggaattcacacaa
gctctccagcttcagcctgacgatgctctgctgtataagctcagggcagatgtgcgtggt
catctagggcttatggaggaagcagtcaaggactacagaactgcagtggagctccaggat
tctatacagcgtccagattcttttagcaggacgctgcccacaggacatggcccacaggat
atggcccacaggacgctgcccacaggaaatggcccatgggaagcttcccattggaagcta
cccatctga
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