Astyanax mexicanus (Mexican tetra): 103043866
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Entry
103043866 CDS
T05042
Symbol
blm
Name
(RefSeq) Bloom syndrome protein homolog isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03440
Homologous recombination
amex03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103043866 (blm)
03460 Fanconi anemia pathway
103043866 (blm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amex03032
]
103043866 (blm)
03400 DNA repair and recombination proteins [BR:
amex03400
]
103043866 (blm)
Enzymes [BR:
amex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
103043866 (blm)
DNA replication proteins [BR:
amex03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
103043866 (blm)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
103043866 (blm)
Bloom's syndrome complex (BTR)
103043866 (blm)
FA (Fanconi anemia) pathway
103043866 (blm)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
BLM_N
BDHCT
Helicase_C
RecQ_Zn_bind
HRDC
RQC
BDHCT_assoc
Syntaxin
Motif
Other DBs
NCBI-GeneID:
103043866
NCBI-ProteinID:
XP_007235739
Ensembl:
ENSAMXG00000016970
LinkDB
All DBs
Position
9:complement(28984699..29002222)
Genome browser
AA seq
1444 aa
AA seq
DB search
MFSLPQNNLKEQLERHSKVSSAQNKLSLAKPKPGAFCFRKTSTSTTSKAAVPEKVIGSNV
FVNRSGNVPRSCEVTKPPLTFPKKPERAPPKFNFFSAPSKPKTQSINPSSNPFAVTKPTL
IQSVIKTSAKSETIPPDTHEDKSAESLVGNDSFAIPVDDWDDLDDFETPSKVRASQSPQI
PVKKTSGLDKNVSPKAASAKSADTTENGSLPVGPSFGACGEALEIPTDTSGADRHDAISA
GEPDDSPIKLTKRLSAVKQKPLLIDSEDESITDNIKPHNKADENFKYSEENEQKCKSPKI
IDIDDSQEEDILEDDFDFIPPSPIPEDQSPSVPTLEKRKPDLIKNEVASVASSRCSVSSL
SGQNVPAKDLKGPDDALFSIMESICCLVDKIPEHELIALTCGTELLLQRAHRKRILAEIA
SSGKSVSVSGAACDFRLLHRGSFGVPTPLISGKGDSALKGFQYRKSFASTMSVDYNNSVF
EDSDCIINGVETPGGSWNPNPSLKSAAKGDQENTCLKKNNVHIESSSLLLKQTDDQTEDL
LQTNLFFSPKKRVGTIKNNKEDKVENNTAGSVYVDSEMDTVPDDFYDDDFDIDDFNESDI
PKYNEEPVDSLATKKSSSATPKPIYEGGPSKSCEKRTVTTPTAVVKPTKPASPEVTYRNP
AHDRFRGFSFPHSSEMMKIFHKRFGLHQFRFNQLEAINATLLGEDTFVLMPTGGGKSLCY
QLPACVSAGVTVVISPLRSLIVDQVQKLTTLDIPATSLSGDKSESEAGRIYMQLSKKDPV
IKLLYATPEKVSASGRMISALQNLYERNLLARFVIDEAHCVSQWGHDFRPDYKRLHELRQ
KFPNVPIMALTATATPRVQKDILNQMAMNRPQVFTMSFNRHNLKYSVLPKKPKKVDEECI
NWIKKYYPRDSGIIYCLSRNDCDTMADSLQRAGIAALAYHAGLNDKDREYVQNKWINQDR
CQVMCATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDGEISHCVLFYSYSDVI
RIKRILAMDKDGNHHSRATHTNNLHSMVHFCENVSECRRIQLLAYFGENKFNADFCKEHP
EVICDNCARPHQYKARNVTEDVKKIVRFVQENCQKVGGRYSKSSQQNRLTLNMLVDIFIG
AKSARIQTGMFGHGAAYSRHNADRLFKKLVLDNVLMEDLYITNNGQAVAYISAGQKAMNV
LNGSMQVVFHETESASSIRKHKASVIKNVSKREEMVTKCLEELNELCKKLGKVFGLHYYN
IFSTSTLKTIAETLSADPEVLLQIDGVTEDKLDKYGAELIELLQKYTEWQLPVEEQVESS
GWIDTARDHLEDDVYDDEEDSSSSYFRSSTGRGEKRKKTPYSRKPKRRKSYNNQNTYKSG
NSGGWSSSKGGYKAAGRGAGRGAGRGSARPAAAAPAARRPGVMALPTPQTAARPFLKPAF
SHLG
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgttttctctccctcaaaacaatttaaaagagcagctggagcggcacagtaaagtcagc
tccgcccagaacaagctttctctggccaaacctaaacccggggcattttgcttcagaaag
acatctacatcaacgactagcaaagctgcagtccctgagaaggtaattggttctaatgtc
tttgtaaaccggagtggcaatgttcctcgcagctgtgaagtaactaaacctcctctgaca
tttccaaagaagcctgaaagagcccctccaaaattcaacttcttcagtgcacccagcaaa
cccaagacacagtccatcaacccatcatccaacccatttgcagtgactaaacctactctg
atccagtctgtcatcaagacttcagccaaatcagaaaccatcccccctgatactcatgaa
gataaaagtgcagaatcactggtgggtaatgactcttttgccattcctgtggatgactgg
gatgaccttgatgattttgaaacgccttctaaagtaagagcatcacaaagcccccagatt
ccagtgaaaaaaacatctggattagataaaaacgtatcgcctaaagctgctagtgctaaa
agtgctgacacaacagagaatggaagtttgcctgttggaccatcatttggtgcttgtgga
gaagctttggaaattccaacagacacctctggtgctgatcgacatgatgccatctctgct
ggggagccagatgattctcccatcaaactaaccaagcgtctatctgcggttaagcaaaag
ccactgctcattgacagtgaggacgagagcatcactgacaatattaaacctcataataaa
gctgatgagaacttcaagtattcagaagaaaatgaacaaaaatgcaagagtccaaaaatc
atagacatagatgacagtcaggaagaggatatacttgaggatgactttgattttattcca
ccgtcacccattccagaagaccagagtccatctgttccaactttggagaaaagaaaacct
gaccttataaaaaatgaggtggcaagtgttgcttcttcgagatgttctgtctcaagcctt
tcagggcaaaatgttcctgctaaagatttaaaagggcctgatgatgctctcttcagtatc
atggagtctatctgttgtctagtggacaaaatcccagagcatgagctcatagccctgact
tgtggcacagagctgcttttacaaagagctcacaggaaaaggattcttgctgagattgca
tcatcaggaaagtcagtgtcagtcagcggagccgcttgtgatttcagattgctgcacaga
ggaagttttggtgttcctacccctctgatctcaggcaaaggagacagtgcactaaaaggc
tttcagtatagaaagtcctttgcatctacaatgtctgtagattacaacaacagtgtgttt
gaagactctgattgcattattaatggtgtggagacaccaggtggctcttggaaccccaac
ccttccctcaaatcagctgcaaaaggagaccaggaaaacacatgtctgaaaaaaaataat
gtccacattgagtcatcaagtttgcttttaaaacagacagatgatcagactgaagatcta
ctacagaccaacctattcttctctcccaagaagcgagtggggaccataaaaaataataag
gaagataaagttgagaacaacactgcagggtctgtgtatgttgattcagaaatggacact
gtgccagatgacttctacgatgatgactttgacattgacgacttcaatgagagcgatatt
ccaaaatacaatgaagaacctgtggattcattagctacaaagaaaagttcaagtgcaacc
ccaaagccaatttatgaaggaggaccctctaagtcctgtgagaaaaggactgtcaccaca
cccacggctgttgtaaaacctactaagccagcctcccctgaggttacatatagaaatcca
gcacatgaccgctttaggggcttcagctttcctcactcttcagagatgatgaagatcttc
cacaagagatttggtcttcatcagttccgtttcaatcagcttgaagccatcaatgctacg
ttgctgggagaggacacgtttgttttaatgcctacaggagggggcaaaagcctctgctac
cagcttcctgcctgtgtgtctgctggagtgactgtggtgatatcccctctacgttctctg
attgtggaccaggtccagaaacttaccacattggatatccctgcgactagcttatctggg
gataaaagtgagagtgaagctggacgaatctacatgcagctctctaagaaagatcctgtc
atcaaactgctttatgccactcccgaaaaggtatctgcaagtgggaggatgataagtgcc
ctgcaaaacctgtatgagagaaatctgcttgctcgttttgtcattgatgaagcccactgc
gtcagccagtggggacatgacttcaggccagactataagcggttacatgagttacggcaa
aagtttcccaatgttcctataatggcactgacagcgactgccacacctcgggtgcagaag
gatatcctcaatcagatggccatgaatcggcctcaagtattcacaatgagcttcaacaga
cacaaccttaaatattctgttctgcctaaaaaacccaagaaggtagatgaggagtgcatt
aactggatcaagaaatattatccacgtgactctgggattatctactgcttgtcaaggaat
gactgtgataccatggctgatagtcttcagagagctggaattgcagcactggcttaccac
gcagggctaaatgacaaagacagagaatatgttcaaaacaaatggatcaaccaggataga
tgccaagtcatgtgtgccacaattgcttttggcatgggcattgacaagcctgatgtgcgc
tatgtgatccatgccagtctgcccaagtcagtggagggctactaccaggaatcggggaga
gcaggccgagacggagagatttcccactgtgttctcttttattcttacagtgatgttatt
cgcatcaaaagaattcttgccatggataaggatggcaatcatcattctagagccacccac
acgaacaaccttcacagcatggtgcatttctgtgagaatgtgtcagagtgtcgaaggatc
cagctgcttgcttactttggcgagaacaaattcaatgctgacttctgtaaagagcatccc
gaagtcatttgtgacaactgtgccagaccacaccaatacaaagccagaaatgtgactgag
gatgtgaagaagattgtgaggtttgtacaagaaaactgtcagaaagttggtggcagatac
agcaaatcttcacagcaaaacagactcactctgaacatgttggtggacattttcataggt
gctaaaagtgcccggatccagacgggcatgttcgggcacggagcagcctactccagacac
aacgcagacaggctctttaagaagcttgtgctggacaatgttctgatggaggacttgtac
attaccaataatggccaggctgtggcctacatctctgctggccaaaaagccatgaatgtt
ctaaatggcagcatgcaggtggtatttcatgagactgaaagtgcatccagcatcaggaaa
cacaaagcctctgtgatcaagaatgtttctaagagggaggaaatggtcacaaagtgcctg
gaagagctcaatgagttgtgtaagaagttgggcaaagtttttggtcttcactactacaac
atcttctccacaagcaccttgaaaacgattgctgagactctatctgctgaccctgaggtg
ctgctacagattgatggcgtgactgaggacaagctggacaaatacggagctgagcttatc
gaactgctgcagaaatacactgaatggcagctgcctgttgaggagcaggttgaaagctca
gggtggatcgacactgcacgagaccacctagaggatgatgtgtatgatgatgaagaggac
agctcgtcatcttatttcaggagcagcacaggtcgaggagagaagaggaagaaaacgccc
tattcaaggaaacccaaaagacggaagagttacaacaaccaaaacacctataaaagtggg
aacagtgggggctggtcttcatctaaaggtggatataaagctgctggtcgaggtgcaggt
cgaggagcgggtcgaggctccgccaggcctgctgctgcagctccagcagcaagaagacca
ggcgtcatggctctgcctacaccccagactgctgcacggccattccttaaacctgccttc
tctcatctcggctaa
DBGET
integrated database retrieval system
