Astyanax mexicanus (Mexican tetra): 103043957
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Entry
103043957 CDS
T05042
Symbol
slc6a4b
Name
(RefSeq) solute carrier family 6 member 4b
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
103043957 (slc6a4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amex02000
]
103043957 (slc6a4b)
Transporters [BR:
amex02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
103043957 (slc6a4b)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
103043957
NCBI-ProteinID:
XP_007233559
Ensembl:
ENSAMXG00000004268
UniProt:
A0A8B9K4T2
W5K9X7
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Position
22:complement(9293991..9313377)
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AA seq
579 aa
AA seq
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MPHQEQPVARGPVPVPVPVIIQTDARDKWSKKIDFLLSVIGFAVDLGNVWRFPYICYQNG
GGAFLIPYVLMAVFGGVPLFYMELALGQFHRTGAISIWKHICPIFKGIGFAICIIALYVS
FYYNTIIAWALFYFYSSFSSTLPWTSCDNAWNTENCTNYFGKDNVTWTNYSRSPAEEFYT
RNVLELHESEGLGNVGIIRWQLMLCLFLIFTIVYFSLWKGVKTSGKVVWVTATLPYVVLF
ILLIRGATLPGAWRGVVFYLQPKWEKLKETSVWVDAAAQIFFSLGPGFGVLLALSSYNPF
TNNCYRDAIVTSLVNCLTSFVSGFVIFTVLGYMAEQRHVNVEDVAKNKGPSLLFITYPEA
IANMMGSTFFAIIFFVMMITLGLDSTFGGLEAIITAVMDEYPDFLSHRRELFVLGLVVVC
FLGSLSTLTKGGAYVVKLLEEFGVGSSIIAVVFLEATAVSWFYGINRFSNDIKSMLGYTP
GLFWKVCWVAISPAFLAYIIISSLLNPSPLTLFDYKFPDWSITVGYIIGMSSFMWIPIYM
VYKLVWTPGSLKQRLAVCLRPERTLPDIHTDTLGLTPVP
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgccccaccaggagcaaccggtggcgcgtggacccgtacccgtacccgtaccggtcatc
atccagaccgacgcgcgagacaaatggagcaaaaagatcgattttctgctgtcggtgatc
gggttcgcggtggacctggggaacgtgtggaggttcccctacatctgctaccagaacggt
ggaggtgcgttcctcatcccctacgtcctcatggccgtgttcgggggcgttcctctcttc
tacatggagctcgctctggggcagttccacaggaccggtgccatctccatatggaaacac
atctgccccatttttaaaggtatcggttttgcgatctgcatcatcgccctgtatgtgtcc
ttctactacaacaccatcatcgcctgggctctcttctacttctactcgtccttcagcagc
actctgccctggaccagctgtgacaacgcctggaacaccgagaactgcaccaactacttc
ggcaaggacaacgtcacctggaccaactactcccgctcgcccgccgaggagttttacacg
aggaatgttctggagctgcacgagtcggaaggtctggggaatgttgggatcattcgctgg
cagctgatgctatgcctgtttctcatctttaccatcgtctacttcagtctgtggaaagga
gtcaaaacgtctgggaaggtagtgtgggtgactgccactcttccgtacgtggttctgttc
attctgctgatccgaggggcgactctacccggagcctggagaggtgtggtcttctacctc
cagcccaaatgggagaaactcaaggagacaagcgtgtgggtggacgctgccgctcagatc
ttcttctctctgggtccaggcttcggtgtgctgctcgctctctccagctacaaccccttc
accaataactgctacagggacgccattgtgacgagtctggtgaactgcttgaccagcttc
gtgtctggatttgtgatttttactgttctgggctacatggctgaacagagacacgtcaac
gtagaggacgtagccaaaaacaaagggccaagccttctgttcatcacctacccagaagcc
attgcaaacatgatgggctccacattcttcgccatcatcttctttgtgatgatgatcacg
ctggggctggacagcacgttcggtggtctggaggccataatcaccgccgtgatggacgag
tacccagacttcctgtcccacagacgagagctgtttgttctgggattggtggttgtgtgc
tttttgggctctctcagcacccttactaaaggaggagcgtacgtggtgaaacttcttgaa
gagtttggagttggttcatctataattgctgtagtgtttctggaggccactgctgtttcc
tggttctatggcatcaacagattcagcaacgacatcaaatccatgctgggctacactccc
ggactgttctggaaggtgtgctgggtggcgatcagcccggcgtttctagcttacatcatc
atcagctccctgctgaacccttcacccctcacgctgtttgactacaagttccctgactgg
agcatcactgtgggctacatcattggaatgtcctcctttatgtggatacccatttacatg
gtttacaaactggtgtggacccccggctccctcaaacagcgcctggctgtttgcctgcgg
cccgagaggacactgccggacattcacacggacacactgggactcactcctgtaccttaa
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