Astyanax mexicanus (Mexican tetra): 103044107
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Entry
103044107 CDS
T05042
Symbol
ints6
Name
(RefSeq) integrator complex subunit 6 isoform X1
KO
K13143
integrator complex subunit 6
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amex03041
]
103044107 (ints6)
Spliceosome [BR:
amex03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
103044107 (ints6)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_INTS6
INT_SG_DDX_CT_C
VWA_2
Motif
Other DBs
NCBI-GeneID:
103044107
NCBI-ProteinID:
XP_007241547
Ensembl:
ENSAMXG00000013498
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Position
11:complement(35527..51718)
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AA seq
854 aa
AA seq
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MPVILFLIDTSASMNQRSHLGTTYLDIAKGAVETFLKLRSRDPASRGDRYMLVSFEEAVA
GIKAGWKDSHATFMTELRNLQAIGLTPFGQALRTSFDLLNLNRLVSGIDNYGQGRNPFFL
EPAIIVAITDGSKLTSTCGVQDELHLPLTTPLPGSELTKEPFRWDQRLFSLVLRIPGHAS
LEPEPLGGVPPDSSPVTPMCEVTGGRSYSVFSQRTLNQCLESLVQKIQSGVVINFEKTGP
DPIEDGPVDLKCGPQPWHSCHKLIYVRPNPKTGVPVGHWPIPESFWPDQNSPTLPPRMAH
PQVRFSCVEAEPMVVDKVPFDKYELEPSPLTQYILERKSPHTCWQVFVSNSAKYGDLGQP
FGYLKASTALNCVNLFVMPYNYPVVLPLLDDLIRVHKFKPTVKWRQSFETYLKTMPPYYI
TPLRKALRMMGAPNLLADSMEYGLSYSVVSYLKKLSQQAKVEADRVCALVGKKVGPDPGI
KLRSRGSALSLAHRKDFAELLQSIVGDGPALPLESNPKEFSGFQLAVLNKALKPQGLRNP
YDIPREHLLDQLSRMRRNLLNASVCILRGQDQDQIHSVPIAQMGNYQDFLKQCPAPLREA
DPDQPKRLHTFGNPFKLDKKAMVVDEADEFVTGTQGKGKRPGEPSSPAGGGAPKRRRCMS
PLLRPGRAYTPPNKTPPRVPENNHSAVGNHVGQIEPDKSADLDPSPESAPISPDLQQNHL
QGDEEEDKQEEEVQENGQATEEEASVDGEEEEGVTRRYPSPNQLKKLRKEEGKELNTELR
VLITKEIRKPGRRYEKIFYLLKQIQGSLETRLIFLQNIIKEAARFKKRVLIEQLENFLEE
IHLRANNMNHLDGL
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgatacttttcctgatagacacgtctgcctctatgaaccagcgctcccatctg
ggcactacctatctggatatagctaaaggtgccgtagagactttcctgaagctgaggagc
agagacccggcgagcagaggagaccgatacatgctggtttctttcgaggaggctgtggct
ggaataaaggctgggtggaaagacagccatgccacgtttatgaccgagttaaggaacctg
caggccatcggactcactccattcggtcaggctttaaggacaagttttgatttgctcaac
ctcaaccgattagtttcagggatagacaactatggacagggtaggaaccctttctttttg
gagcctgctatcattgtggcaattactgatggcagcaagttgaccagtacatgcggggtg
caggatgagctccatttgcccttgacaacaccattaccgggcagtgagctcaccaaggag
ccgttccgctgggaccaacgacttttttcattggtcctccgcattccaggtcacgcctct
ctggaaccggaaccactgggcggagtcccgcctgactcctcccctgtcacgcccatgtgt
gaggttactggaggtcgttcgtacagtgtgttttcccagcgcacactcaatcagtgtcta
gagtctctggtgcagaagattcagagtggagtagttatcaactttgagaagactggacca
gatccaattgaagatggtccagtggatctaaagtgtggccctcaaccgtggcacagctgt
cataagctaatctatgtccgaccaaatcctaaaactggtgttcctgttggccactggccc
attccagagtctttctggcctgaccagaactctcctactctgcctccacgtatggcccat
cctcaagttcggttctcctgtgtggaagcagaacccatggtggtggataaggttccattt
gataaatatgaactagagccttcgccccttacacaatacattctggagaggaagtctcca
cacacctgctggcaggtgtttgtgagtaatagtgctaaatatggtgacctgggtcagccc
ttcggatacctgaaggcgagcactgctctcaactgcgtcaacctgttcgttatgccctat
aactaccctgtggttctgcccctgcttgatgacttgattagagtgcacaaattcaagccc
acagtgaaatggcgccagtcctttgagacctacttgaagaccatgcccccgtactacatc
acacccctgaggaaggcgctgcggatgatgggggcaccgaatctgctggcggacagtatg
gagtacggcctgagctacagcgttgtgtcctacctcaaaaaactcagccagcaggcgaag
gtggaggcagatcgagtgtgtgcgctggttgggaagaaggtggggccggaccccgggatt
aagcttcgctccagaggctccgccctctcgctggcgcacaggaaagacttcgcagagctg
ctgcagagcatcgtcggggacgggccggctctccccctcgagtcaaaccctaaagagttc
tccgggttccagcttgctgttctcaacaaggccttgaaaccgcagggattacgaaacccg
tatgacataccgagagagcacttgttggaccagctgagccgtatgaggcggaaccttctg
aatgccagtgtgtgtatcttgaggggtcaggatcaagatcagattcacagtgtacctata
gcacagatggggaactatcaggatttcctaaaacagtgtcctgctcccctgcgagaggca
gacccagatcagcccaagcgcttacacaccttcggaaaccccttcaaactggataagaag
gcaatggtggttgatgaagcagatgagtttgtgacgggcactcaggggaaaggaaagcgt
cccggtgagcccagttctcctgctggaggcggagctcccaaacgcaggaggtgcatgtct
ccccttctgcgtcctggacgagcgtatacaccgccaaataaaacgccccctagagttcca
gagaacaatcattctgcagttgggaatcatgttggtcagattgagccggacaaaagcgca
gatctggatccctctcctgagtcggcgccgatctcccctgacctgcagcaaaaccacctg
cagggagatgaagaggaggataagcaggaggaggaggtgcaggagaacgggcaggccact
gaggaggaggcgtctgtagacggagaggaagaggagggagtcacccgccgctacccttcc
cctaaccagctgaagaagttaagaaaagaggaaggaaaagagctgaacacggagctccgc
gtcctcatcaccaaggagatcaggaaacccggcagacgttacgagaaaatcttttacctg
ctgaagcaaatccaggggagtctagaaactcggctcatcttcttacagaacatcattaaa
gaggcggccaggttcaaaaagcgagttctgatcgagcagctggagaactttctagaagag
attcacttaagagcgaacaacatgaatcacctggatggattgtga
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