Astyanax mexicanus (Mexican tetra): 103044150
Help
Entry
103044150 CDS
T05042
Symbol
si:dkey-92j12.5
Name
(RefSeq) multiple PDZ domain protein
KO
K06095
multiple PDZ domain protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04517
IgSF CAM signaling
amex04519
Cadherin signaling
amex04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
103044150 (si:dkey-92j12.5)
04519 Cadherin signaling
103044150 (si:dkey-92j12.5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
103044150 (si:dkey-92j12.5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
Motif
Other DBs
NCBI-GeneID:
103044150
NCBI-ProteinID:
XP_049328589
LinkDB
All DBs
Position
25
Genome browser
AA seq
1830 aa
AA seq
DB search
MMDTQRALLAVERLQERLKQRGDLPTEEKLSLLKSVLQSPLFHQILIMQDSAHYHQVSSK
LPRSHSLRGDMGRVGTSCALRHSESYLSAQRRNDRYGSANHIPTTPIITEDFQSTIQTMA
MGRRVLSVDFQKEHGALGFDLVGLQNQYKGGSGIFIQGVQPGSMAHCDGLRESDQILAVN
GEVFDSTTTQQHAFRMLQSAVSMTTLTVARGPTGDLYPPRMSRAVSLPKDLSGISSAFSQ
QRNIQLIELENDGAGLGFGIVGGRSAGTMVKSILPEGPAGKDGRLRTGDLLLRIGEVDVS
NMGTDEVARELRLSGSKVKLLIARETTDNDLMHSVAQQQETQEGQCAEGDKEFTVKVTKN
KMGLGLTISRSIDHLNAGFSGIVVKGIVKGSAVDQNGQVHIGDHIIAVDGRRLHGCSEER
AMEILRLTGQRVELTLQRKCPQIGSSSASQPHSSVTFALEPKTSPESGSLLSSLCQDPRY
KSKLSEEEKAELKRKWQSRLGKKYEIMVAQVQKFSECSGLGVSLESRAGRHFICTILPEG
PLGQCGLIRPGDQLLEVNGIPLIGESHKDVLGLLKELPVEACVVCCRLMPPTPDDDDDEE
SDVQFSLKDLIAEFSEKQTDQKNCSGRPGRGGAEDCGKMDVPSLSYQAMWQEEIQVYELQ
KGEAGLGFSILDYQDPVDAQKTVIVIRSLVPGGLAERDGRLMPGDRLMFVNGTDLSNTSL
GHAVHVLKSTNYGNVLIGVAKPLPENDAQDTGSFLTSNHSRDSHQLSTVQENSVLHSSRM
EAGAKGSSHQSSGLEKTITVSRGSASLGMTVSAIKDGSGIIIRSVLSGGAVSKDSRLAIG
DAIVAINGEPTTNLTTAQARAMLRKHSLIGPELSVTYVPAAFLDMHRATILHLKQEVMAD
RAAVIQSKQELKKDHTHVGQAVQKQQHKAFTKLESVCRAVEVDTGRVNGASWGQSRSLWG
QKDDTDRREEREESVPKCAVGSRQANGQRESERKEEEAQRRNDHDSWSQPRRVTVIRKDG
ECLGISVIGGRGMGRRLSNGDMQRGIFIKHIAEDSPAAYNSTLKPGDQILQVGGVDVSDF
THEEAVEAIRRAGDRVELLVQNPQVSDLVSRTEEQGLLESSHHIDSKCENPSLLTRLSQS
SPFSPAPFKPTGNKALKKPPHPVPPPLRLPSGPTVVVTDGLTMKNTLERLSGLPEVPQHN
ELEAASYWSRMTQRYGSLPGQLKLVELDCSGHSGGVGLCVTGSRHSARGRMSVYVSEVQV
GGAAAADGRIRVGDELLEINGQVLYGRSHQNAAAIINSAPSKVKIVLTRSEAALKHMATE
PVTETDNCPILSPSAVDIGMFKESKHGVLNQMEGRMILENKPKAYSSEKSNTNHLCPVNT
LSNHSPSSGPSPALRNSSVSPVPLSCRTPPTSHNTADNPTHHSPAPFCPLTNQAGAALPG
SSCCSSCSMNSDPLLCPIMPGCINTIDICKGHAGLGLSIVGGCNTLLGMILIHEVNEGGA
AYRDGRLTAGDQILEVNGIDLRMATHEEALSVLRLSPQHVRLCVYRHPSTNSFRSHAAYT
PEDMWDLFTVQLQLAPGQDLGMSIVGKRNDTGIFVSEVRRGGMVEGDGRLLLGDQILSVN
GEDIRAVSQDYANTLLQSCTGSVVMEVARFRATPPYSFDCQAGPVDSSLFFCPDIYESVE
RNVATRTVTLQKSTLQGLHVSAIGGLKEETGLYVSAIDPDSSAAHSRLLEVGDKIVSING
KSTASLSHTEAHTLLRKPSGAVTLQVISHCGASRSSWDLSSSAVPENYATPNNLSSPQYR
TVSLEQGSAGPGFGTVGGSFGGGRPSAVWR
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atgatggatacccagcgtgccctgttggcggtggagcgtctgcaggagaggctgaagcag
aggggcgatctgcccaccgaggagaagctgagcctgctgaagagtgtattacagagccca
ctgttccaccagatccttatcatgcaggactccgcccactaccaccaggtttccagtaag
ttgcccagatcccattccctgcgaggtgatatgggacgtgttggcacatcctgtgctctc
aggcacagtgagtcctacctgtcagcccagcggcgaaacgaccgatacggctctgccaac
catatacccaccactcccatcatcaccgaggacttccagtccactatacagaccatggca
atgggtcggcgtgtgctcagtgtggattttcagaaggagcacggcgctctggggtttgat
ttggtgggcctgcagaatcaatacaaaggagggtctggaattttcatacagggagtacag
cccggatccatggctcactgtgatggtctccgtgaatcagatcagatcctcgcagtgaac
ggggaggtgttcgactctaccacgacccagcagcatgcgttcaggatgttacagagcgct
gtctccatgaccacgctgaccgtcgcccgaggaccaacgggtgacctgtacccaccgcgc
atgagccgggccgtttcactgcccaaagacctctcgggcatcagcagtgctttcagtcag
cagaggaatatccagctaatcgagctggagaatgatggtgcaggcctggggtttggaatt
gttggagggaggagcgctggcaccatggttaaatccatcttacctgaaggaccagcaggg
aaggacgggcgtttgcggactggtgatctgctcctcaggattggtgaagtggacgtgtcc
aatatgggcactgatgaggtggcgcgggagctccgcctctcaggctccaaagtgaagctt
ctcattgccagggaaaccacagacaatgacctcatgcactctgttgcccagcaacaggaa
acgcaagaaggacagtgtgctgagggggataaagagttcacagtcaaagttacaaagaac
aaaatgggtctaggcctcactatctccagatctatagatcacctgaacgcaggtttcagt
ggcattgtggtgaaggggatcgtgaagggcagtgcggtggatcagaatggacaagtgcat
attggagatcacattattgcggtagacgggcgccggcttcacggctgcagtgaggagcgg
gcgatggagattctgaggttgacaggtcagagggtggagctaactctacagaggaagtgt
cctcagattgggtcctccagcgcctcacagcctcactcatcggttacatttgcgttagag
ccaaaaacttccccagaatctgggagtctgctctcgtcactttgccaagaccctcgctac
aagtccaagctgtcagaggaggagaaggctgagctgaagaggaagtggcaaagcaggctg
ggaaagaagtacgaaataatggtggcccaggtgcagaagttcagtgagtgcagtggttta
ggggttagtctggagtcaagagcaggtcgtcactttatctgcaccatcctgcctgaagga
ccactaggccagtgtggactcataagacctggggaccagctactggaggtgaacgggata
cccctgattggtgagagccataaggacgtgctgggcctactgaaggagcttcccgtggag
gcgtgtgtggtgtgctgtcgcctgatgccgcccactccagacgacgacgatgatgaagag
agtgatgttcagtttagcctgaaggatctgatcgctgagttctctgaaaagcagacggat
cagaagaactgcagcgggcggccggggagaggtggagcagaggattgtgggaagatggac
gtcccatccctgtcctatcaggctatgtggcaggaggagattcaggtctatgagctgcag
aaaggagaagctggcctgggattcagtatactggactatcaggatccagtggatgcgcag
aagacggtgatagtgatccgctcgctggttccggggggtttggctgagagagacgggcgg
ctgatgccgggagaccggctgatgtttgtgaatgggacggatttgagtaacaccagcctg
ggtcacgctgttcacgtcctaaagagtaccaactacggcaatgtactaatcggggttgcc
aaaccattaccggaaaatgacgctcaggacactggaagcttcctaaccagcaaccattcc
agagacagccaccagctctccacagtgcaggaaaattctgtgctgcacagcagcagaatg
gaggcgggcgctaaagggagctctcatcaaagcagtggccttgagaagaccatcaccgtg
agccggggcagcgccagcttgggtatgacagtgagtgctataaaggatgggtcaggtata
atcatccggtcagtgctgagtggaggtgctgtcagtaaggacagccggctggcaataggg
gacgcaattgtagccatcaacggagaacccaccaccaacctcaccaccgctcaggctcgg
gccatgctgcggaaacactcgcttattggaccagaactcagtgtcacctatgtacctgca
gctttccttgacatgcatcgagccaccatcctccacttaaaacaggaggttatggcagat
cgagctgctgtcatccaatcaaagcaggagctcaaaaaggatcacacccatgttggccag
gcagtccagaagcagcagcacaaagcatttacaaagcttgaaagcgtgtgtagagcagtg
gaagttgacactgggagagtaaatggagcatcatgggggcagagccggtcactgtgggga
cagaaagatgatacggacagacgagaagaaagagaagaaagtgtcccgaaatgtgcagtt
ggctcccggcaagcgaacggacagagagaatcggagaggaaggaggaagaggcacagcgg
agaaatgatcacgattcatggagtcaaccccgacgggtgacggtgatcaggaaggatggt
gagtgtcttggcatcagtgtgattggtgggcgtggcatggggcgccgtctaagcaacgga
gacatgcaacgtggcatcttcatcaaacacatcgcagaggacagtcctgcagcatacaac
agtacactcaaacctggagaccaaatactacaggttggaggtgtggatgtgagtgatttt
actcatgaagaagcagtggaggcaattcgccgagccggagacagagtggagctactagtg
caaaatcctcaggtttcagaccttgtcagcaggaccgaagaacagggcctgttagagagc
agccaccacatagactccaaatgtgagaatcccagtctactcactcgcctctcccagtcc
agcccgtttagccccgccccgtttaagcctacaggaaacaaggcgttaaagaaacctccc
caccccgtcccacctcccctaaggctgccctcagggcccacagttgtggtaacagacgga
ctgacaatgaagaacactctagaaaggctgagtggactcccagaggttccacagcacaat
gaactggaagcagcttcatactggagccgtatgacgcagcggtatggcagtctgccgggg
cagctgaagctggtggagctggactgcagtgggcacagcggtggtgtgggtctgtgtgtg
acggggagcagacacagcgcccgcgggaggatgagcgtgtacgtgtcagaggttcaggtg
ggaggggctgctgctgctgacgggcgaatcagagttggagacgagctgctggagattaac
ggacaggtattatacggccgtagtcaccagaatgccgctgctattattaatagcgctcca
tctaaggttaagattgtattgacaaggagtgaagctgcattgaagcacatggctacagaa
ccggtaactgagacggacaactgtcccatcttatccccctctgctgtggatatcggtatg
ttcaaagaaagcaagcatggcgtcctaaatcagatggaaggaaggatgatactagagaac
aaaccgaaggcttattcctctgaaaagagcaacaccaatcatctttgtcctgtcaacact
ttatccaatcacagtccttcgagtggcccctctcctgcattacgcaactcatcagtcagt
cccgtacctctgagctgccggaccccgcccacatcccacaacaccgcagacaaccctaca
caccatagtcccgcccccttctgtcccctgaccaatcaggcgggcgccgctctgcctggc
tcctcctgctgttcatcctgctccatgaactcggaccccctgctgtgtcccatcatgccc
ggctgtataaacaccatagatatctgtaaaggacacgctggcctgggcctgagcatagtt
gggggctgcaacacgttactgggaatgattttaatccatgaggtgaatgaaggtggtgct
gcttacagggacgggagactgacggcaggggatcagattctcgaggtgaacggtatagat
ctgaggatggcgacacacgaggaggccctgagcgtcctgaggctgagtcctcagcacgtc
cggctctgtgtgtacagacacccctccacgaacagcttccgcagccacgctgcctacact
cctgaagacatgtgggacctgttcacagtgcagctgcagctagcaccaggccaggacctg
gggatgagcattgtgggcaaaaggaatgatacggggatattcgtgtcggaggtgaggcgc
gggggaatggtggagggagatggacggctgctgctgggggaccagatcttgtctgtaaat
ggagaggacatccgagctgtttctcaagactacgctaacacactgttacagagctgcact
gggtctgtggtgatggaggtggcacgttttagagctactccaccctactcatttgattgc
caggcaggtcctgtggattcctctcttttcttctgtcctgacatttatgagtctgtggaa
aggaacgtagccaccagaacagtcacgcttcagaagagtaccttacaggggctgcatgtg
agtgccatcgggggtctcaaggaggaaacaggcctctacgtctctgccatcgacccagac
tcatctgctgcccacagtagactcctggaggtaggtgataagattgttagcatcaacggc
aagtcaaccgcatccctctctcacactgaagctcacaccctcctgagaaagcccagtggg
gccgtcactctgcaggtcatttcacactgtggcgctagtcgatcgtcttgggatctgtct
tcatctgctgttccagaaaactacgctacccctaataacttgagctctcctcagtaccgg
actgtctctctggagcagggctctgctggtccgggcttcggcacagtgggagggagcttc
ggtggaggacggccgtctgcagtgtggcgatag
DBGET
integrated database retrieval system