Astyanax mexicanus (Mexican tetra): 103044167
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Entry
103044167 CDS
T05042
Symbol
dscamb
Name
(RefSeq) Down syndrome cell adhesion molecule
KO
K06767
Down syndrome cell adhesion molecule
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
amex04515
]
103044167 (dscamb)
Cell adhesion molecules [BR:
amex04515
]
Immunoglobulin superfamily
DSCAM family
103044167 (dscamb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
Ig_5
C2-set_2
Pur_ac_phosph_N
C1-set
V-set_CD47
Sp38
Interfer-bind
C2-set_3
fn3_2
DUF6377
Protocadherin
DUF4446
DUF6249
Motif
Other DBs
NCBI-GeneID:
103044167
NCBI-ProteinID:
XP_022534727
Ensembl:
ENSAMXG00000014775
LinkDB
All DBs
Position
4:44751590..44886881
Genome browser
AA seq
2021 aa
AA seq
DB search
MWIFAFLFLQSILNVFGEDLRSSLYFVNASLQEVVFSSTTGALVPCPAAAVPPATLRWYL
ATGEEIYDVPGIRHVHPNGTLQIYGFLPSSFSNLINDNTYYCTAENPSGKIRSQDLHIKA
VFREPYTVRVADQRVMRGNTAVFKCIIPASVEEYVTVVSWEKDTVSLVSGSRYLITSTGA
LYILDVQSEDAVNIYRCTTRHRYTGETRQSNSARLLLSEPVDSAPVILDGFEQKEVMVGR
RVELPCKASGHPPPRYRWLKDNSPLESDSRFHQSVSGLLIEATRPSDGGNYVCEVWNSFG
NAKVVGRLQVKQPLKAVVSPRKVRGSVGSQVSLFCSVTGSDEYDITWYRNGERIQHGPSV
RITGINHENLVMEGMAKSDGGAYQCFARNGKMSTQDFVQVILEDGTPKILSAFSEKVVSP
NEPISLVCHVKGTPLPTVTWTLDDDPVIKDSHHRMDRVITAESHTLSYLNVSHTQVTDGG
VYRCTCNNSAGSVSYQARINVRGPASIRPMKNLTAIAGRDTFIHCRIIGYPYYSIKWYKD
SNLLPFNHRQRAFENNGTLKLYNVQNSDEGEYTCYVLVDPEKQIHRSVHVTVKVPPLIQH
SDSQSASIGQRVFIPCVVTSGDLPMFITWHKDGKPINDSLGVTIDKIDFTSSLRISNLSE
IHNGSYTCIARNEAATVEHSIQLIVKVPPHFEVQPRDQDGIYGKSVILNCSAKGNPIPTI
VWKHSKGAGVPQFQPIALNSGSRVQLLEKGSLLIKHVLEEDSGYYLCKVSNDVGADISKS
MYLTVKIPAMITSYPNTTRAEQGHMTEMSCTAHGEKPIKVRWEKESHIINPDMSRYVVNV
KEVADEVISTLQILHTVREDSGFFSCIAINSYGEDKGIIQLIVQDRPDPPEVEIREVKDR
TIALRWTMGFDGNSPITGYDINYKNKSAPWASSQTTKDVSPQLNQATIIELHPASTYNIR
MFAKNQIGESRPSNELTITTDEAPPDGAPQDVQLESTSSQSIKVTWKAPHKHLQNGLIRS
YQVCYREYGTGGSPQYSTINLDTTGDTETITLDNLKKYTQYEVRVQAANRAGMGPTSEEA
VITTLEDVPSRPPENVVTTATTPETISLSWSALPKEALNGMLLGYRVIYWANLLDGELGE
IKNVTTGKPSLELENLEKYTNYSIQVLAFTRAGDGVRSEQIYTRTKEDVPGPPAGVKAAA
ASASVVFVSWLPPLKLNGIIRKYTVFCSNPYPTVISEFEAAPDVYFRRVTNLNQNWKYSI
WVVAVTAAGRGNASEIITVEPQAKAPARILTFSGTVTTPWMRDIVLPCKAVGDPPPAVKW
LKGNNGTPAPVSVDNRRSVHTNGSFVIRTVKAEDSGFYSCVASNNWGSDEIMLNLQVQVP
PDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSEDNSEEWGSFPISPSERSYRLE
NLKCGTWYKFTLTAQNAVGPGRISEIIEAKTHGKEPQFAKDHELFSTINSTRVELNLIGW
NNGGCPINSFTLEYRPVDTTVWTTVSRAALTKSHILYDLQEATWYELQMRVGNSAGLAEK
RVLFATLNVDGSTIAPLPKIVDPSQENMQGNEGLKMMVTIISILVAIAMVFIVLLVMRRR
RREQRLKRLRDAKSLAEMLMSKNTRTPDAVNKQQQTLRMHIDIPRAQLLIEERDTMETID
DRSTVLLTDNDFGETSKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTNPTARRTAKAG
PATRSRYASQWTLNRPHPPMSSHTLTTDWRLPTPRATGSVDKESDSYSVSPSQDTDRARS
SMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQMTAGTNDYTDSLT
SSTPSESGICRFTASPPKPQDASRVMNMAVPKAHRPAGELVHLPPYLRMDFLLNRGAHGS
SREATGQTCLEPQRSRAAKRPAVLAPTPSEAPSTAPSTSSGPPSREAAQQWQPGTASTLP
HREPGDLAQAAKLSSSQESLLDSRGHLKQSNNPYAKSYTLV
NT seq
6066 nt
NT seq
+upstream
nt +downstream
nt
atgtggatatttgcatttctgtttctccagagcatcctgaatgttttcggtgaagatcta
cgttccagcttatattttgtcaatgcatctctgcaagaggtagtgttctccagcaccaca
ggggcactggtgccgtgtccagcagcggccgtgccccccgccacgctacgctggtacctg
gccaccggggaggagatctatgatgtgccaggcatccggcatgtgcatcccaatggcaca
ctgcaaatctacggcttcctcccctccagctttagtaacctaatcaatgacaatacctac
tattgcacagccgagaatccatcagggaagattaggagccaagacttacacattaaggcc
gtatttcgggaaccgtacacggtcagagtggcggaccaaagagtcatgagaggcaataca
gcggtcttcaagtgcattatcccggcctcagtagaggagtatgtcactgtcgtatcgtgg
gagaaagacactgtctcacttgtctcaggatcaagatatctcattacatccacaggggcc
ttgtatattctggatgtgcagtcagaggatgcggtgaatatctaccggtgcaccacacgc
catcgctacacaggagagaccagacaaagcaacagcgcccgacttcttttatcagaacct
gtcgattctgcaccagtaattctggatggatttgagcagaaggaggttatggtgggtcgt
cgggtggagctgccctgtaaagcgtccggtcacccgccgcctcggtatcgatggctgaag
gacaacagcccgctggagtcagacagtcgcttccaccaaagcgtctctgggcttctgatc
gaggccacgagacccagtgatggaggaaactacgtgtgtgaagtgtggaatagctttggc
aatgctaaagtggtgggaagattgcaagtcaaacagccattaaaggcggttgttagccct
cgcaaggttcggggcagcgtgggcagtcaggtgtctctcttctgcagcgtcactggctct
gatgaatatgacatcacctggtacagaaatggtgagagaatccagcatggccccagtgtg
cgcatcaccggcattaaccacgaaaacctggtgatggagggcatggctaagagtgacgga
ggagcctaccagtgctttgctcgcaacggaaagatgtccacccaggactttgtgcaggtc
atcttggaggacggcacaccaaagatcctctcagccttcagtgaaaaagtggtcagtccc
aacgaacccatctcgcttgtctgtcatgtgaaaggaacgcccctgcccaccgtcacctgg
acgctggatgacgacccggtcatcaaggacagccaccatcgcatggaccgcgtcatcacg
gccgagagtcacacgctcagctacctgaacgtctcccacacgcaggtcactgacggcggg
gtgtaccggtgcacgtgcaacaactccgccggatcggtctcctaccaggcgcgaataaac
gtaagaggtcccgccagtatccgtccaatgaaaaacctcactgccatcgccggccgggac
acattcattcactgccgcatcattggctacccttactattccatcaagtggtacaaagat
tcaaatttgctcccgtttaaccatcgccagcgtgcctttgaaaacaacggcacattgaag
ctgtacaatgtgcagaattcagacgagggagagtacacctgctacgttctggtggatcct
gagaagcagatccatagaagcgtccacgtcactgtgaaagtgccgcctctgatccagcac
tccgactctcagagtgcatctataggtcagagggtcttcatcccctgtgtggtgacctct
ggtgacctgcccatgttcatcacctggcacaaagatggcaaacccatcaacgacagtctg
ggggtcacgatcgacaaaatcgacttcaccagctccctgcgcatctccaacctctccgaa
atccacaacggcagctacacctgcatcgcccgcaacgaggccgccaccgtcgagcacagc
atccaactcatcgtcaaagttccgccacattttgaggtgcagcctcgggatcaggatggg
atctatgggaagtcagtcatcttgaactgctcagctaaaggaaaccctattcctactatt
gtttggaagcattcgaaaggtgccggagttcctcagtttcagccgattgctctgaactcg
ggctcccgggtgcagctgctggagaaaggctctctgctgatcaaacacgtactggaggaa
gacagcggctactacctgtgcaaagtcagcaacgacgtgggcgccgacatcagcaagagc
atgtacctcactgtcaaaatccctgccatgatcacctcctacccaaacaccacccgtgcg
gaacagggtcacatgacggagatgagctgtacggctcatggtgagaaacccatcaaggtg
cgctgggagaaggagtcccacatcatcaaccccgacatgagccgctatgttgtcaacgtc
aaggaagtggctgatgaggtcatttccactctacagattctgcacacagtcagagaggat
tctgggtttttctcctgcatcgccattaactcgtacggtgaagataaaggaatcattcag
ttaattgtacaagatcggccagaccctcctgaagtggaaatcagagaggtgaaggacagg
accattgctcttcgctggacaatgggctttgatggcaacagccccatcacaggatatgac
atcaactataagaacaaatcagccccctgggcctcatcccaaaccaccaaagacgtctca
ccccagctcaaccaggccaccatcatcgagctgcaccccgcctccacctacaacatccgc
atgttcgccaagaatcagatcggagagagcagacccagcaatgagcttaccatcaccact
gatgaagccccacctgatggcgctccccaggatgtgcagcttgaatcgacgtcatcacag
agcatcaaagtcacctggaaggctccacacaaacaccttcagaacggtttgatccggagc
tatcaggtgtgctatcgtgagtacggcactggaggcagtcctcagtacagcaccatcaac
ctggatactacaggagacacagagaccatcactctggacaacctgaagaagtacacgcag
tacgaggtgcgagtgcaggcggcaaaccgcgctggcatggggccaacgtctgaggaggcc
gtcatcaccactctggaggacgttccaagccgaccacctgaaaatgtagtgaccacagcc
acgactccagagaccatctccctgtcctggtctgctctgcctaaagaagcactgaacgga
atgctgctgggataccgtgtcatctactgggccaatctactggatggagagctgggtgag
atcaaaaatgtgaccacaggaaagccctctcttgagctggagaatctggagaaatacacc
aactacagcatacaggttctggcctttacacgggcgggggatggcgtgcgcagtgagcag
atttacactcgcaccaaagaggatgttcctggacctccagctggagtgaaagcagctgct
gcatctgcctctgtggtgtttgtgtcttggcttccccctctcaaactcaatggaatcatc
cggaaatacaccgtcttctgctccaacccttacccgacggtaatcagtgagtttgaggct
gctcctgatgtgtatttccgacgtgttaccaatctgaaccagaactggaagtacagtatt
tgggtggttgctgtgactgcagccggccgtggcaacgccagtgagatcatcaccgtagaa
cctcaagccaaagctcctgctcggattctgacattcagtggaacagtaactacaccatgg
atgagggacattgtcctgccctgcaaagctgtgggagatcctcctccagccgtcaagtgg
ctaaagggaaataacggtacacctgctccagtttctgttgacaaccgccgcagcgtccac
accaacggcagcttcgttattcgcacagtgaaagcagaagactccggattctacagctgt
gtggccagcaacaactggggctcagatgaaatcatgcttaatctgcaggttcaggtacct
ccagaccagccacgcctcactgttaccaaaaccaccaccacctccattacgctgtcctgg
attcctggagacaatggaggaagctccatcaggggctatattctccagtattcagaggac
aacagtgaggagtggggcagcttccccatcagccccagtgagcgatcctaccgcctggag
aacctgaaatgtggtacctggtacaaattcaccttaactgctcagaacgctgtgggtcct
ggccgcatcagtgagatcattgaagccaaaacccatggaaaagaaccacaatttgccaaa
gaccacgagctgttctccaccatcaactccacacgtgtagagctcaatctgattggttgg
aacaatggcggctgcccaatcaactcctttactctggagtaccggccagtggacaccaca
gtctggaccacagtgtcgcgcgctgccctcaccaagagccacatcctctacgacctgcag
gaggcgacgtggtacgagctgcagatgagggtgggcaacagcgcaggcctggcagagaag
agggtgctgttcgcaacgcttaatgtagatggcagcacaattgccccactgccaaagata
gtggaccccagccaggagaacatgcagggcaacgagggtctgaaaatgatggtgaccatc
atctccatcctggtagccattgccatggtcttcattgtgctgctggttatgaggaggagg
aggagggagcagaggctaaagagattacgagatgcaaaaagcctggctgagatgctgatg
agtaagaacacccgtactccagatgctgtgaacaaacagcagcagaccctccgaatgcac
atcgatatcccacgagctcagctactcatcgaggagagggacacaatggagacgatcgat
gatcgatccacagtgctgttgacagacaacgactttggggagacttccaagcagaagtct
tcaacagttacacacacagtccattaccagtccttgtcccaagccacaggcccattggtg
gatgtctcagacgctcgacccggtacaaaccccacagctcgccgtacagctaaagcaggg
cctgccacacgtagccgctacgccagccagtggaccctgaacagaccccacccacccatg
tcctcacacaccctcaccacggactggaggctacccactcctcgagccactggctctgtg
gacaaggaaagcgacagttacagtgtcagtccctctcaggacacagaccgtgctcggagc
agcatggtgtccacagagagtgcttcctccacgtacgaggaactggcccgcgcctacgaa
cacgccaagatggaagagcagctgcgtcacgccaagttcaccatcaccgagtgcttcatc
tccgacacgtcctccgagcagatgacagctggcaccaacgactacacagacagcctgacc
tccagcacaccctctgaatctgggatctgcagattcaccgcctccccacccaaaccacag
gacgccagccgggtcatgaatatggctgtgcccaaagcacacagacctgctggtgaactg
gtccaccttcccccttacctacgtatggacttcctgctgaaccgaggagctcacggttcg
agtcgtgaagccacaggacagacgtgtttggagccgcagaggagtcgcgcagcaaaacgg
ccggcagtgctggcccccaccccctccgaagcaccttccaccgccccctccacctcctcc
ggccctccgagcagagaagcagcccagcagtggcagcccgggacagcctccacactgccc
caccgcgagcctggagacctggcccaggctgccaaactcagcagctcacaggaatcactg
ttagactccagaggacacctgaaacagagcaacaacccgtacgcaaagtcctacacactc
gtataa
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