Astyanax mexicanus (Mexican tetra): 103044243 Help Entry 103044243         CDS       T05042                                  Symbol rfc1 Name (RefSeq) replication factor C subunit 1   KO K10754   replication factor C subunit 1 Organism amex  Astyanax mexicanus (Mexican tetra) Pathway amex03030   DNA replication amex03410   Base excision repair amex03420   Nucleotide excision repair amex03430   Mismatch repair Brite KEGG Orthology (KO) [BR:amex00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     103044243 (rfc1)    03410 Base excision repair     103044243 (rfc1)    03420 Nucleotide excision repair     103044243 (rfc1)    03430 Mismatch repair     103044243 (rfc1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:amex03032]     103044243 (rfc1)    03400 DNA repair and recombination proteins [BR:amex03400]     103044243 (rfc1) DNA replication proteins [BR:amex03032]  Eukaryotic type   DNA Replication Elongation Factors    RFC (replication factor C)     103044243 (rfc1) DNA repair and recombination proteins [BR:amex03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     RFC (replication factor C)      103044243 (rfc1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RFC1 BRCT AAA PTCB-BRCT AAA_22 AAA_30 AAA_7 AAA_5 AAA_17 RuvB_N AAA_33 Rad17 AAA_16 AAA_14 BRCT_2 nSTAND3 RNA_helicase AAA_18 AAA_19 RCF1-5-like_lid NTPase_1 Motif Other DBs NCBI-GeneID:  103044243 NCBI-ProteinID:  XP_007230281 Ensembl:  ENSAMXG00000021652 UniProt:  A0A8T2KPY7 LinkDB All DBs Position 25:complement(20192651..20206583) Genome browser AA seq 1131 aa AA seqDB search MDIRRFFVPTTSKSTTGSSSTEEEHRKKSSSKILSPKSDEKRTAKRKKRVIADSDSEEEK KTKKNVKEKSTASGKKDPVAFVSDSDSDEAFESLKKISKPKENGNNRGGKDLTSGKSKEV KSAAVKSPVKPSAAPGSKSDIRNALSPTPPKPAAPKHTATSAADFFGSSSINRSGKKLVA SASTKRKAPVEDPEHSDEAIAKQLQMDEDMELEKQIHDDEEFARTLAMLEEAPLPKKARV GTVSPSKSSPQATATDSKKHTSKSPSPKKSPVKASSKLAQMKRRADEEEEQKNKKEERKS KMVFSPKKEPITPTRSEMAATPKTEQASEGASRSKSISTPKSAGSTKTSPTKPEVSPEGS EKKRVNSAAFRNYLNRDGPRALGSKEIPQGAENCLEGCVFVLTGVLESMERDDAKSLIER YGGKVTGNVSRKTTYLVLGRDSGVSKTEKAQSFGTKILNEDELLELIRTKPGKKSKYEIA AEAECKATKTKSPSQKLRSQRPSGTKTSPAKSSPSPKKTRPGSASTPGPSGSSRRDSAPE VKKSLEFGKASPPVPRPAGEENGTSLLWVDKYRPRSLKNLIGQQGEQSCANKLLRWLQNW HKHHSGNTKPAAARFGKFGGKDDGSGFKAALLSGPPGVGKTTTAALVCEEVGYSYVEMNA SCTRSKNSLKEVIAESLNNTSIKNFYTGTSQTVSNKHVLIMDEVDGMAGNEDRGGIQEMI GLIKQSKIPIICMCNDRNHQKIRSLANYCFDLRFQRPRVDQIKGAMMSIAFKEGVKIPPP ALNEIILASNQDIRQVMHNLCMWSATDKVMTYDQAKADASKAKKDMKLGPFDVCRKVFVS GEETAHMTLIDKSDLFFHDYSLAPLFVQENYIHVRPAAAGGNLKNHLVLLSKTADSICDG DLVDRQIRSRQTWSLLPTQAIYASVLPGELMRGYMSQFPTFPSWLGKFSSTGKHHRIIQE LASHMSLKTLSSKEAVNLDYLPYLRTALLEPLQSQGSEGANKSVTLMDDYAIIKEDFDNI MEISSWGGQPDPYSKLDSKVKASFTRAYNKETHLTPYSLQTVKKGRKGAADVDLALDPEN DTQGQEEEEEEEGLDAMIKQKKAKATKEPKEPKKEKAKESGKGKGRGKGKK NT seq 3396 nt NT seq  +upstreamnt  +downstreamnt atggacatccgcaggttctttgttccaacaacgtccaaatcaacaacaggaagcagcagc actgaagaggagcacagaaagaaatcttcctccaagatcttaagtcctaaatctgatgag aaacgcacagcaaagcggaagaagagagtaatcgcagattcagactctgaggaggagaag aaaacaaagaagaatgttaaagaaaagagcactgcatctggaaagaaagaccctgttgct ttcgtgtctgattcagattcagatgaagcgtttgagtcgttgaagaaaatctccaaacct aaagagaatggaaataacagaggtggaaaagacttgacctccgggaaatcgaaagaagtg aaatcagctgcagttaaatcacctgttaaaccctctgctgctcctggctctaaatcggac atcaggaacgctctcagtccgactccacccaaaccagctgcacccaaacacaccgccacc tctgctgcagatttctttggtagctcttcaatcaacaggtcgggaaagaagctggtggcg agtgccagcaccaagcgcaaagcacctgtcgaagatccagagcacagtgatgaggccatc gcgaagcagctacagatggacgaggacatggagttggagaagcagatccatgatgatgag gagtttgctagaactctggctatgctggaagaagccccactgcccaaaaaggcccgtgta ggcacagtgtccccctctaagagcagcccacaggccactgctactgactccaaaaagcac acctccaagagcccctcgccaaaaaagagccctgtaaaggccagttccaagctggcccag atgaagaggagagctgatgaagaggaggagcagaaaaacaagaaagaagagaggaaaagc aaaatggtcttctctcccaaaaaagagcccatcacacccacccgctcagagatggcagct acacccaaaacagaacaggcttctgaaggagcgtccagatctaaaagcatctccacgccc aagagtgccggcagcaccaaaacctctcccacgaaaccagaggttagtccagaaggctcg gagaagaagcgggtaaactcagcagcgttcagaaactacctgaacagagatgggcctcgt gctctcgggtctaaagagataccacagggtgcggagaactgtctggagggctgtgtgttt gtgctgactggagtgttggagtctatggagcgagacgatgcgaagtcattaatagagcgc tatggtgggaaagtcactggaaatgtcagtcgaaaaaccacgtatctggtgctgggccga gacagtggagtttcaaagactgagaaggctcagagttttggcacaaagatcctaaatgaa gatgagctgctggaactgatccgaaccaaacctggcaagaagtctaaatacgagattgct gcagaggctgagtgcaaagccacaaagacgaagagtccttcacaaaagctcaggtctcaa agacccagtggaaccaagaccagcccggccaaaagcagcccgtctccgaaaaagacccgg ccgggctccgcctctacaccgggaccctcagggtcctcccgcagagactcggcaccagag gtgaagaagagtctggaatttggtaaagcctcgccccctgtgccccgccctgctggagag gaaaatggaacaagcttgttgtgggtggataagtaccgccctcgcagtcttaagaatctg attgggcagcagggagagcagagctgtgccaataagctgctgaggtggcttcagaactgg cacaagcaccacagcggcaacactaaacccgcagcggctcggtttggtaagttcggggga aaggatgatggttctgggtttaaggctgctctgttgtcgggaccacctggtgtgggaaag accaccactgctgcccttgtttgtgaggaggtgggttacagttacgtggagatgaatgcc agctgtacccgcagtaagaacagtctgaaggaagtgatcgcagaatctctcaacaacacg agcattaaaaacttctacacaggtacatctcagactgtgagtaataaacatgttctcata atggacgaggtggacggcatggcaggaaatgaggacagaggaggaattcaggagatgatt ggtctgataaagcaatctaagatcccaatcatctgcatgtgtaacgatcgcaaccatcag aagatccgctcactggccaactactgcttcgacctgcgcttccagcgtccccgagtggat cagataaagggtgccatgatgtcaattgcttttaaagaaggagtgaagatcccgcctcca gctctgaacgaaatcatcctggcatcaaatcaggatattcgacaggttatgcataatctg tgtatgtggtcagctacagacaaagttatgacctatgaccaggcgaaagcagacgccagc aaagccaagaaagacatgaaactgggtccgtttgatgtgtgcaggaaagtgttcgtctcg ggagaagaaaccgcccacatgactttgattgataagtcggatcttttcttccatgattac tcgttagcgccgctgttcgttcaggagaattacatacacgtacgaccggctgcagcggga ggaaatctgaaaaatcacctggtgttactgagtaaaacagcggacagcatctgcgacgga gatttagtggacagacagattcgctcccgacagacctggtctttactgcccacacaggca atctatgccagtgtgctgccgggtgagctgatgcggggttatatgagccagtttcccact tttcccagctggctggggaagttctcgtctactggtaaacaccaccgcatcatacaggag ctggcctcacacatgagtctgaagacgttgagcagtaaggaggcggtgaatctggactac ctgccgtatctgcgcactgctctactggagccgctgcagtcacagggttcagagggagcc aataagagtgtgacgcttatggacgactacgccatcatcaaagaggatttcgacaacatt atggagatcagtagctggggcggacaaccggacccctactctaaactcgactctaaggtg aaagcatcatttacacgagcatataacaaagagacgcacctgaccccgtactcactgcag acagtaaagaaaggtcgcaaaggggccgcagacgtcgacctcgccttagatcctgagaat gacacccagggccaggaagaggaagaggaggaggaagggcttgacgccatgatcaagcaa aagaaagctaaagccacaaaagagcccaaagagcccaaaaaagaaaaagccaaggagtct ggaaaggggaaaggaagaggaaagggcaagaagtga

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