Astyanax mexicanus (Mexican tetra): 103044244
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Entry
103044244 CDS
T05042
Symbol
irf2bp1
Name
(RefSeq) interferon regulatory factor 2-binding protein 1
KO
K22383
interferon regulatory factor 2-binding protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103044244 (irf2bp1)
04121 Ubiquitin system [BR:
amex04121
]
103044244 (irf2bp1)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
103044244 (irf2bp1)
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Atypical E3
103044244 (irf2bp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
103044244
NCBI-ProteinID:
XP_007251641
UniProt:
A0A8B9RI14
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All DBs
Position
9:complement(9009307..9014148)
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AA seq
623 aa
AA seq
DB search
MSSSSSQASSRRQWCYLCDLPKMPWAMIWDFSEAVCRGCVNYEGADRIELLIDTARQLKR
THVMQDGRSPGPQPSGKHGPGVKDGAVDGGRPPSERYERGRGDYGPARLPNGLPRLEDGG
PPEVSRQSPNARRTGMVGAVPPNLMAQGLVGPPHGLLTAVPGLGRAGGGPLTISTPMLSE
ISKRQAMGMGMSVGVASFMSSDFEKELKEKQRNAEALAELSESVRNRTDDWAGRPKAVRD
TLLTLSTCTPFNVRFKKDHGLVGRVFAFDAKLGVEFELKVFVEYPCGSGQVFSSLLTLVK
QMFHDSQKDTGKVISSGFKYVEYEKRHGTGDWRLLSELLSDGVRAFKDPPTPDAIPQPYL
DASCSMLPTALCHIGRPAQPRLRRRKPSPEPDGSDRLPTEEQLRQHWPLATYPGIAGHLP
PTSMPSVGQPPSSLQDGLPGSHGSDPSPITALMSVADNVGAAGQSPKDVPGSSSAHTSST
GLQNSASPSSAGQRRLASRNGEPPAGSGGAAVATAMPPGGAGDQGAVTGVDASGAGSAPL
CCTICHERLEDTHFVQCPSVPGHKFCFPCTRDFIRSQGSGSEVYCPSGDKCPLVGSNVPW
AFMQGEISTILAGDVKVKKERDP
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctcctcctcacaggcgtcttccaggcggcagtggtgctacctgtgcgacctg
ccgaagatgccgtgggccatgatctgggacttcagcgaggccgtgtgccgcggctgcgtt
aactacgagggcgcggaccgcatcgagctgctgatcgacaccgccaggcagctgaagagg
acgcatgtgatgcaggacgggaggtcgcctggtcctcagcccagcggtaagcatggtcct
ggggtgaaggatggagctgtggatgggggtagaccaccttctgagaggtatgagcgaggc
aggggggattatggtccagctaggcttcctaatggactccccagacttgaggatggaggt
ccacctgaggtcagcaggcagagccccaatgctagaaggacggggatggtgggtgctgtg
ccacctaatctgatggcacaagggctggttggacctcctcatgggttgcttactgctgtg
ccaggactggggagggcaggtggtggccctttgaccatctccacacccatgctaagcgag
ataagcaaaaggcaggccatgggcatgggcatgagtgtgggggtggcatccttcatgagc
tccgacttcgagaaagagctgaaagagaagcagaggaacgcagaagctctggctgagttg
tctgaaagtgttcggaacaggacggacgactgggcaggtcgtcccaaggcggtgcgagac
accctgctgaccctgtccacctgcacccctttcaatgtgaggttcaagaaggatcacggc
ctggtgggtcgagtgttcgccttcgatgccaagctcggagtcgagttcgagctcaaggtt
tttgttgagtatccctgtggttctggccaggtgttctccagcttgctgacactggtcaag
cagatgttccacgacagccagaaagacacaggcaaggtgatcagttcgggtttcaagtac
gttgagtacgagaagagacatggcacgggagactggcgcctgctttcagaactcctcagc
gatggagtccgtgcattcaaggacccacccaccccagatgccatccctcagccttaccta
gatgccagctgctccatgctgcccactgcactctgccacattggccgcccggcccagccc
cgacttcgccgtcgcaagccctcgccagagccggatggcagtgacaggctgccgacagag
gagcagcttcgtcagcactggccccttgccacatacccgggcattgccgggcacttgcca
cccacctctatgcccagcgttgggcagcctccttccagtctccaggatggtcttcctggc
tcccatggcagcgacccctcgcctatcactgccctcatgagcgtggcagacaatgtcggt
gctgcaggccagtccccaaaagatgtgccaggtagcagcagtgcccacacctcctcaaca
ggcctccaaaacagcgcaagcccctcctcagctgggcagcggcgtctggcatcgcggaac
ggagagccaccagctgggtctggaggggcagcggttgccacagcgatgccacctggtgga
gctggtgatcagggtgcagtgacgggtgttgatgcctccggagcgggcagtgctcctctc
tgctgcaccatctgccacgaacgtctggaggacacacacttcgtccagtgcccgtcagtg
ccagggcacaagttctgctttccatgcacccgagatttcatccgcagccagggctcaggc
agcgaggtgtactgccccagcggagacaagtgccctctggtgggctccaacgtgccctgg
gcgttcatgcagggagagatatccaccatcctggcgggagacgtgaaggtgaagaaggag
agagacccctaa
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