Astyanax mexicanus (Mexican tetra): 103044317
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Entry
103044317 CDS
T05042
Symbol
pax6a
Name
(RefSeq) paired box protein Pax-6
KO
K08031
paired box protein 6
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103044317 (pax6a)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
103044317 (pax6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_23
Homeobox_KN
HTH_Tnp_IS1
HTH_SB
DUF6115
HTH_28
Motif
Other DBs
NCBI-GeneID:
103044317
NCBI-ProteinID:
NP_001278194
Ensembl:
ENSAMXG00000013008
UniProt:
O42612
LinkDB
All DBs
Position
10:5844217..5867115
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AA seq
437 aa
AA seq
DB search
MPQKEYYNRTTWESGVASMMQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCD
ISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVGKIAQFKRECPSIFAWE
IRDRLLSEGICTNDNIPSVSSINRVLRNLASEKQQMGADGMYEKLRMLNGQTGTWGTRPG
WYPGTSVPGQPNQDGCQQSDGGAENTNSISSNGEDSEEAQMRLQLKRKLQRNRTSFTQEQ
IEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQANNS
TSHIPISSSFSTSVYQPIPQPTTPVSFTSGSMLGRSDTALTNTYSALPPMPSFTMANNLP
MQASQTSSYSCMLPTSPSVNGRSYDTYTPPHMQAHMNSQSMATSGTTSTGLISPGVSVPV
QVPGSEPDMSQYWPRLQ
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaaaaagaatactataaccggaccacgtgggagtctggtgtagcttccatgatg
caaaacagtcacagtggggtgaaccagctcggtggtgtgtttgtgaacggcagaccgctg
ccggactccaccagacagaagatagtggagctcgcgcatagcggagcgcgaccttgcgac
atatcccgaatcctacaggtgtccaacggctgcgtgagtaagatcttgggcaggtattat
gagaccggctctatccgaccgcgagccatcggaggcagcaaaccacgcgtagccactccg
gaggtggtcggcaaaatcgcccagtttaagagggagtgcccgtccatcttcgcgtgggag
atccgagacagactgctgtcagagggcatctgcaccaacgataacatcccgagtgtgtca
tccataaacagagtgctgcgaaacctggcgagcgaaaagcaacagatgggcgcagatggc
atgtatgagaagctgaggatgctgaacggacagacggggacatggggcacccggccgggc
tggtaccccggaacctccgtgccaggacagcccaatcaagatggctgccagcaatcagat
ggaggcgccgagaacaccaactctatcagctcaaatggggaggactcagaagaagcccag
atgagactgcagctgaaaaggaaactgcagaggaatcgcacatctttcacacaagaacaa
atagaagcactagaaaaagagtttgaaagaacgcactatccagacgttttcgcccgagag
agactcgctgcgaaaatcgacctgccggaggccagaatacaggtgtggttctcaaacaga
agagcgaagtggaggagagaggaaaagctacgaaatcaaagacgacaagccaacaactcc
accagtcacatacccatcagtagcagtttcagcacaagcgtctatcagccaatccctcag
ccaaccacaccagtgtcctttacttcaggctccatgctgggacggtcagacacagccctc
acgaacacatacagtgccctaccgccaatgccaagcttcaccatggccaacaacctgcct
atgcaagcaagccagacctcgtcttactcctgcatgctaccaaccagtccttcagtcaac
gggcggagctatgacacgtacacaccccctcacatgcaggcacatatgaacagccagtcg
atggccacctcgggcacaacctcaacgggtctaatctcgcccggagtgtctgtaccggta
caagtgccaggcagcgaaccggacatgtcccagtactggcccagattacagtga
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